RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 ANKLE1Q8NAG6 615 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 PNMA1Q8ND90 353 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 TRPV1Q8NER1 839 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 AGBL1Q96MI9 1066 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 LSG1Q9H089 658 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 RANBP17Q9H2T7 1088 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 GPCPD1Q9NPB8 672 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 FBXO40Q9UH90 709 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 RBM8AQ9Y5S9 174 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 TAF6LQ9Y6J9 622 aa12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 BAZ2BQ9UIF8 2168 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-220ENST00000581835 DNAJC25-GNG10A0A024R161 153 aa12.04□□□□□ -0.48
PPP4R1-220ENST00000581835 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
PPP4R1-220ENST00000581835 SEC23AQ15436 765 aa12.04□□□□□ -0.48
PPP4R1-220ENST00000581835 TKFCQ3LXA3 575 aa12.04□□□□□ -0.48
PPP4R1-220ENST00000581835 GPATCH4Q5T3I0 446 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-220ENST00000581835 CCDC174Q6PII3 467 aa12.04□□□□□ -0.48
PPP4R1-220ENST00000581835 STOX1Q6ZVD7 989 aa12.04□□□□□ -0.48
PPP4R1-220ENST00000581835 DDX11Q96FC9 970 aa12.04□□□□□ -0.48
PPP4R1-220ENST00000581835 TINF2Q9BSI4 451 aa12.04□□□□□ -0.48
PPP4R1-220ENST00000581835 UBAC1Q9BSL1 405 aa12.04□□□□□ -0.48
PPP4R1-220ENST00000581835 KAT14Q9H8E8 782 aa12.04□□□□□ -0.48
PPP4R1-220ENST00000581835 HOMER2Q9NSB8 354 aa12.04□□□□□ -0.48
PPP4R1-220ENST00000581835 ALPK3Q96L96 1907 aa12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 ICAM1P05362 532 aa12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 GOLGA8HP0CJ92 632 aa12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 ALAS1P13196 640 aa12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 CNGA1P29973 690 aa12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 PRAMEF19Q5SWL8 479 aa12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 IFIT1BQ5T764 474 aaKnown RBP12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 PRPF38BQ5VTL8 546 aaKnown RBP12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 ANKRD35Q8N283 1001 aa12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 NCOA7Q8NI08 942 aa12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 DIS3LQ8TF46 1054 aaKnown RBP12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 PAWRQ96IZ0 340 aaKnown RBP12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 TRERF1Q96PN7 1200 aa12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 ACAD9Q9H845 621 aa12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 RNF146Q9NTX7 359 aa12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 DDX20Q9UHI6 824 aaKnown RBP12.03□□□□□ -0.48
PPP4R1-220ENST00000581835 LCTP09848 1927 aa12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 DNAH12Q6ZR08 3092 aa12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 MSCO60682 206 aa12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 MUM1L1Q5H9M0 696 aa12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 MAMDC4Q6UXC1 1216 aa12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 NECAB2Q7Z6G3 386 aa12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 RALYLQ86SE5 291 aaKnown RBP12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 MSL3Q8N5Y2 521 aaKnown RBP12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 FGD4Q96M96 766 aa12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 HTATIP2Q9BUP3 242 aa12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 UBA5Q9GZZ9 404 aa12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 ANO2Q9NQ90 1003 aa12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 A1CFQ9NQ94 594 aaKnown RBP12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 NRBP1Q9UHY1 535 aa12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 CCPG1Q9ULG6 757 aa12.02□□□□□ -0.49
PPP4R1-220ENST00000581835 SLC27A2O14975 620 aa12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 SEPT4O43236 478 aa12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 CDC45O75419 566 aa12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 CENPBP07199 599 aaPredicted RBP12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 TAL1P17542 331 aaPredicted RBP12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 CNTN2Q02246 1040 aa12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 NECTIN1Q15223 517 aa12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 ASPRV1Q53RT3 343 aa12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 ERICH6BQ5W0A0 696 aa12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 CHST3Q7LGC8 479 aa12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 ZNF467Q7Z7K2 595 aaPredicted RBP12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 MB21D2Q8IYB1 491 aaPredicted RBP12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 FAM133AQ8N9E0 248 aa12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 DPF3Q92784 378 aa12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 CPVLQ9H3G5 476 aa12.01□□□□□ -0.49
PPP4R1-220ENST00000581835 POTEB2H3BUK9 544 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 IFIT3O14879 490 aaKnown RBP12□□□□□ -0.49
PPP4R1-220ENST00000581835 SNAI1O95863 264 aaPredicted RBP12□□□□□ -0.49
PPP4R1-220ENST00000581835 PARP1P09874 1014 aaKnown RBP12□□□□□ -0.49
PPP4R1-220ENST00000581835 ZNF865P0CJ78 1059 aaPredicted RBP12□□□□□ -0.49
PPP4R1-220ENST00000581835 ANTXR2P58335 489 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 ANO1Q5XXA6 986 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 CREB3L3Q68CJ9 461 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 CASC1Q6TDU7 716 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 ADGRF4Q8IZF3 695 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 C11orf49Q9H6J7 331 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 SENP2Q9HC62 589 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 PPP4R2Q9NY27 417 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 CYP39A1Q9NYL5 469 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 PNMA2Q9UL42 364 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 WDR19Q8NEZ3 1342 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 SYNGAP1Q96PV0 1343 aa12□□□□□ -0.49
PPP4R1-220ENST00000581835 ERICH2A1L162 156 aa11.99□□□□□ -0.49
PPP4R1-220ENST00000581835 SOWAHBA6NEL2 793 aa11.99□□□□□ -0.49
PPP4R1-220ENST00000581835 COL6A1P12109 1028 aa11.99□□□□□ -0.49
PPP4R1-220ENST00000581835 COL9A3Q14050 684 aaPredicted RBP11.99□□□□□ -0.49
PPP4R1-220ENST00000581835 WTAPQ15007 396 aa11.99□□□□□ -0.49
PPP4R1-220ENST00000581835 SART3Q15020 963 aaKnown RBP11.99□□□□□ -0.49
PPP4R1-220ENST00000581835 STAG2Q8N3U4 1231 aa11.99□□□□□ -0.49
PPP4R1-220ENST00000581835 IGDCC4Q8TDY8 1250 aa11.99□□□□□ -0.49
PPP4R1-220ENST00000581835 MTA3Q9BTC8 594 aa11.99□□□□□ -0.49
PPP4R1-220ENST00000581835 MAD2L2Q9UI95 211 aa11.99□□□□□ -0.49
PPP4R1-220ENST00000581835 CNPY2Q9Y2B0 182 aa11.99□□□□□ -0.49
PPP4R1-220ENST00000581835 PFASO15067 1338 aa11.99□□□□□ -0.49
PPP4R1-220ENST00000581835 ASTN1O14525 1302 aa11.98□□□□□ -0.49
PPP4R1-220ENST00000581835 PALM3A6NDB9 673 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms