RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 PLA2G6O60733 806 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 DDAH1O94760 285 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 SNHG28P0DPA3 235 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 PTMSP20962 102 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 BMP8BP34820 402 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 STAT2P52630 851 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 IKQ13123 557 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 ASPRV1Q53RT3 343 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 LBX2Q6XYB7 198 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 SYNE3Q6ZMZ3 975 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 RUFY3Q7L099 469 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 SGMS1Q86VZ5 419 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 DEFB123Q8N688 67 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 MB21D1Q8N884 522 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 SLF1Q9BQI6 1058 aa15.69■□□□□ 0.1
CSNK1D-220ENST00000581737 PARP1P09874 1014 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 CALM1P0DP23 149 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 CALM2P0DP24 149 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 CALM3P0DP25 149 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 FDX1P10109 184 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 ZNF543Q08ER8 600 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 NECAB2Q7Z6G3 386 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 ZNF654Q8IZM8 581 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 FBXL16Q8N461 479 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 PRPF38AQ8NAV1 312 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 MAP3K14Q99558 947 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 P2RX7Q99572 595 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 LRRC2Q9BYS8 371 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 GJD2Q9UKL4 321 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 PPP1R9AQ9ULJ8 1098 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 RABGAP1Q9Y3P9 1069 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 SLC12A7Q9Y666 1083 aa15.68■□□□□ 0.1
CSNK1D-220ENST00000581737 SPDYE16A6NNV3 312 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 TMEM232C9JQI7 657 aa15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 DSG3P32926 999 aa15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 KIF5BP33176 963 aa15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 MAGEA10P43363 369 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 NUCB2P80303 420 aa15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 FAM110CQ1W6H9 321 aa15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 CHMP4CQ96CF2 233 aa15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 ZSCAN31Q96LW9 406 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 TCEANC2Q96MN5 208 aa15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 UPF3BQ9BZI7 483 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 MORF4L1Q9UBU8 362 aa15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 CTDP1Q9Y5B0 961 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-220ENST00000581737 CPA1P15085 419 aa15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 RCAN1P53805 252 aa15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 COL9A3Q14050 684 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 GRM4Q14833 912 aa15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 SAMD1Q6SPF0 538 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 Q6ZUG5 572 aa15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 KCTD1Q719H9 257 aa15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 CTCFLQ8NI51 663 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 COA7Q96BR5 231 aa15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 INTS4Q96HW7 963 aaKnown RBP15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 GPHNQ9NQX3 736 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 FBXO28Q9NVF7 368 aa15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 MTMR10Q9NXD2 777 aa15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 CDH23Q9H251 3354 aa15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 FRMPD2Q68DX3 1309 aaPredicted RBP15.66■□□□□ 0.1
CSNK1D-220ENST00000581737 ZBED4O75132 1171 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 GNAQP50148 359 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 CCNA1P78396 465 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 TROAPQ12815 778 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 SYDE2Q5VT97 1194 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 APOA5Q6Q788 366 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 BTNL9Q6UXG8 535 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 GPRC5AQ8NFJ5 357 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 NUP133Q8WUM0 1156 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 BRF1Q92994 677 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 KIFC2Q96AC6 838 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 ATG4CQ96DT6 458 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 GBP4Q96PP9 640 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 PAGR1Q9BTK6 254 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 AGXT2Q9BYV1 514 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 SENP2Q9HC62 589 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 GPCPD1Q9NPB8 672 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 PDRG1Q9NUG6 133 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 COL11A1P12107 1806 aaPredicted RBP15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 PFASO15067 1338 aa15.65■□□□□ 0.1
CSNK1D-220ENST00000581737 DNAH12Q6ZR08 3092 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 KLF18A0A0U1RQI7 1052 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 VWA5AO00534 786 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 ZBTB43O43298 467 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 HMGCRP04035 888 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 PDIA4P13667 645 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 COPB2P35606 906 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 ERVK-9P63128 1117 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 ERVK-24P63145 666 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 LRIT3Q3SXY7 679 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 RASGRP2Q7LDG7 609 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 SPRYD3Q8NCJ5 442 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 TRIB2Q92519 343 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 PNMA2Q9UL42 364 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 ADAMTS5Q9UNA0 930 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 LIMCH1Q9UPQ0 1083 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 STXBP5LQ9Y2K9 1186 aa15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.64■□□□□ 0.09
CSNK1D-220ENST00000581737 CUL9Q8IWT3 2517 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms