RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 PHF24Q9UPV7 400 aa24.72■■□□□ 1.55
CCDC42-203ENST00000581598 MCM3APO60318 1980 aa24.71■■□□□ 1.55
CCDC42-203ENST00000581598 SOX1O00570 391 aaPredicted RBP24.71■■□□□ 1.55
CCDC42-203ENST00000581598 SLC4A3P48751 1232 aa24.71■■□□□ 1.55
CCDC42-203ENST00000581598 LRIT3Q3SXY7 679 aa24.71■■□□□ 1.55
CCDC42-203ENST00000581598 RNF180Q86T96 592 aa24.71■■□□□ 1.55
CCDC42-203ENST00000581598 UBE2OQ9C0C9 1292 aaKnown RBP24.71■■□□□ 1.55
CCDC42-203ENST00000581598 ACAD9Q9H845 621 aa24.71■■□□□ 1.55
CCDC42-203ENST00000581598 LTBP2Q14767 1821 aa24.7■■□□□ 1.55
CCDC42-203ENST00000581598 ADCYAP1R1P41586 468 aa24.7■■□□□ 1.54
CCDC42-203ENST00000581598 IKQ13123 557 aaPredicted RBP24.7■■□□□ 1.54
CCDC42-203ENST00000581598 GPR153Q6NV75 609 aa24.7■■□□□ 1.54
CCDC42-203ENST00000581598 DCAF4Q8WV16 495 aa24.7■■□□□ 1.54
CCDC42-203ENST00000581598 FGD4Q96M96 766 aa24.7■■□□□ 1.54
CCDC42-203ENST00000581598 FAM184BQ9ULE4 1060 aa24.7■■□□□ 1.54
CCDC42-203ENST00000581598 ISY1Q9ULR0 285 aaKnown RBP24.7■■□□□ 1.54
CCDC42-203ENST00000581598 ADAMTS4O75173 837 aa24.69■■□□□ 1.54
CCDC42-203ENST00000581598 NT5C2P49902 561 aa24.69■■□□□ 1.54
CCDC42-203ENST00000581598 KCTD1Q719H9 257 aa24.69■■□□□ 1.54
CCDC42-203ENST00000581598 PRR12Q9ULL5 1215 aa24.69■■□□□ 1.54
CCDC42-203ENST00000581598 LAMA4Q16363 1823 aa24.68■■□□□ 1.54
CCDC42-203ENST00000581598 PGK1P00558 417 aa24.68■■□□□ 1.54
CCDC42-203ENST00000581598 MYCNP04198 464 aaPredicted RBP24.68■■□□□ 1.54
CCDC42-203ENST00000581598 TOP1P11387 765 aaKnown RBP24.68■■□□□ 1.54
CCDC42-203ENST00000581598 AKNAD1Q5T1N1 836 aa24.68■■□□□ 1.54
CCDC42-203ENST00000581598 BTNL9Q6UXG8 535 aa24.68■■□□□ 1.54
CCDC42-203ENST00000581598 AGBL1Q96MI9 1066 aa24.68■■□□□ 1.54
CCDC42-203ENST00000581598 TSEN34Q9BSV6 310 aaKnown RBP24.68■■□□□ 1.54
CCDC42-203ENST00000581598 ABHD16BQ9H3Z7 469 aa24.68■■□□□ 1.54
CCDC42-203ENST00000581598 TOMM22Q9NS69 142 aa24.68■■□□□ 1.54
CCDC42-203ENST00000581598 RNF146Q9NTX7 359 aa24.68■■□□□ 1.54
CCDC42-203ENST00000581598 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.68■■□□□ 1.54
CCDC42-203ENST00000581598 PRKAG2Q9UGJ0 569 aa24.68■■□□□ 1.54
CCDC42-203ENST00000581598 ATP11BQ9Y2G3 1177 aa24.68■■□□□ 1.54
CCDC42-203ENST00000581598 HIP1O00291 1037 aa24.67■■□□□ 1.54
CCDC42-203ENST00000581598 MDM2Q00987 491 aaPredicted RBP24.67■■□□□ 1.54
CCDC42-203ENST00000581598 ACVR2BQ13705 512 aa24.67■■□□□ 1.54
CCDC42-203ENST00000581598 RRP12Q5JTH9 1297 aaKnown RBP24.67■■□□□ 1.54
CCDC42-203ENST00000581598 FAM133AQ8N9E0 248 aa24.67■■□□□ 1.54
CCDC42-203ENST00000581598 LRCH3Q96II8 777 aa24.67■■□□□ 1.54
CCDC42-203ENST00000581598 TTC14Q96N46 770 aa24.67■■□□□ 1.54
CCDC42-203ENST00000581598 LBHD1Q9BQE6 289 aaPredicted RBP24.67■■□□□ 1.54
CCDC42-203ENST00000581598 TMEM47Q9BQJ4 181 aa24.67■■□□□ 1.54
CCDC42-203ENST00000581598 RNF41Q9H4P4 317 aaPredicted RBP24.67■■□□□ 1.54
CCDC42-203ENST00000581598 A1CFQ9NQ94 594 aaKnown RBP24.67■■□□□ 1.54
CCDC42-203ENST00000581598 DUSP11O75319 330 aaKnown RBP24.66■■□□□ 1.54
CCDC42-203ENST00000581598 TRIM60Q495X7 471 aa24.66■■□□□ 1.54
CCDC42-203ENST00000581598 MFSD6Q6ZSS7 791 aa24.66■■□□□ 1.54
CCDC42-203ENST00000581598 ARMCX2Q7L311 632 aa24.66■■□□□ 1.54
CCDC42-203ENST00000581598 KLHDC9Q8NEP7 349 aa24.66■■□□□ 1.54
CCDC42-203ENST00000581598 TRERF1Q96PN7 1200 aa24.66■■□□□ 1.54
CCDC42-203ENST00000581598 HOMER2Q9NSB8 354 aa24.66■■□□□ 1.54
CCDC42-203ENST00000581598 SYNRGQ9UMZ2 1314 aa24.65■■□□□ 1.54
CCDC42-203ENST00000581598 COL6A3P12111 3177 aa24.65■■□□□ 1.54
CCDC42-203ENST00000581598 POTEB2H3BUK9 544 aa24.65■■□□□ 1.54
CCDC42-203ENST00000581598 HAND2P61296 217 aa24.65■■□□□ 1.54
CCDC42-203ENST00000581598 RASGRP2Q7LDG7 609 aa24.65■■□□□ 1.54
CCDC42-203ENST00000581598 FERMT2Q96AC1 680 aa24.65■■□□□ 1.54
CCDC42-203ENST00000581598 RANBP17Q9H2T7 1088 aaKnown RBP24.65■■□□□ 1.54
CCDC42-203ENST00000581598 ZHX1Q9UKY1 873 aaPredicted RBP24.65■■□□□ 1.54
CCDC42-203ENST00000581598 MOXD2PA6NHM9 499 aa24.64■■□□□ 1.54
CCDC42-203ENST00000581598 CST5P28325 142 aaPredicted RBP24.64■■□□□ 1.54
CCDC42-203ENST00000581598 CCDC96Q2M329 555 aa24.64■■□□□ 1.54
CCDC42-203ENST00000581598 TBC1D10CQ8IV04 446 aa24.64■■□□□ 1.54
CCDC42-203ENST00000581598 LENG1Q96BZ8 264 aaPredicted RBP24.64■■□□□ 1.54
CCDC42-203ENST00000581598 CHMP4CQ96CF2 233 aa24.64■■□□□ 1.54
CCDC42-203ENST00000581598 CCDC136Q96JN2 1154 aa24.64■■□□□ 1.54
CCDC42-203ENST00000581598 KATNBL1Q9H079 304 aa24.64■■□□□ 1.54
CCDC42-203ENST00000581598 DIAPH3Q9NSV4 1193 aa24.64■■□□□ 1.54
CCDC42-203ENST00000581598 DNAH12Q6ZR08 3092 aa24.63■■□□□ 1.53
CCDC42-203ENST00000581598 A0A1W2PQ45 241 aaPredicted RBP24.63■■□□□ 1.53
CCDC42-203ENST00000581598 A0A1W2PQY0 241 aa24.63■■□□□ 1.53
CCDC42-203ENST00000581598 ICAM1P05362 532 aa24.63■■□□□ 1.53
CCDC42-203ENST00000581598 ALAS1P13196 640 aa24.63■■□□□ 1.53
CCDC42-203ENST00000581598 CNTN2Q02246 1040 aa24.63■■□□□ 1.53
CCDC42-203ENST00000581598 CCSAPQ6IQ19 270 aaPredicted RBP24.63■■□□□ 1.53
CCDC42-203ENST00000581598 CCDC174Q6PII3 467 aa24.63■■□□□ 1.53
CCDC42-203ENST00000581598 CCDC144CPQ8IYA2 1237 aa24.63■■□□□ 1.53
CCDC42-203ENST00000581598 UPF3AQ9H1J1 476 aaKnown RBP24.63■■□□□ 1.53
CCDC42-203ENST00000581598 ASB14A6NK59 587 aa24.62■■□□□ 1.53
CCDC42-203ENST00000581598 ZNF213O14771 459 aa24.62■■□□□ 1.53
CCDC42-203ENST00000581598 PDHBP11177 359 aa24.62■■□□□ 1.53
CCDC42-203ENST00000581598 CCDC144BQ3MJ40 725 aa24.62■■□□□ 1.53
CCDC42-203ENST00000581598 SYDE2Q5VT97 1194 aa24.62■■□□□ 1.53
CCDC42-203ENST00000581598 CWC27Q6UX04 472 aaKnown RBP24.62■■□□□ 1.53
CCDC42-203ENST00000581598 ESR2Q92731 530 aa24.62■■□□□ 1.53
CCDC42-203ENST00000581598 PDLIM7Q9NR12 457 aa24.62■■□□□ 1.53
CCDC42-203ENST00000581598 CCPG1Q9ULG6 757 aa24.62■■□□□ 1.53
CCDC42-203ENST00000581598 MTMR7Q9Y216 660 aa24.62■■□□□ 1.53
CCDC42-203ENST00000581598 LCTP09848 1927 aa24.62■■□□□ 1.53
CCDC42-203ENST00000581598 LRRC37A2A6NM11 1700 aa24.61■■□□□ 1.53
CCDC42-203ENST00000581598 SOWAHBA6NEL2 793 aa24.61■■□□□ 1.53
CCDC42-203ENST00000581598 SNHG28P0DPA3 235 aa24.61■■□□□ 1.53
CCDC42-203ENST00000581598 ACLYP53396 1101 aa24.61■■□□□ 1.53
CCDC42-203ENST00000581598 NKX3-2P78367 333 aa24.61■■□□□ 1.53
CCDC42-203ENST00000581598 TLE2Q04725 743 aa24.61■■□□□ 1.53
CCDC42-203ENST00000581598 TTBK2Q6IQ55 1244 aa24.61■■□□□ 1.53
CCDC42-203ENST00000581598 NUP133Q8WUM0 1156 aa24.61■■□□□ 1.53
CCDC42-203ENST00000581598 DSCC1Q9BVC3 393 aa24.61■■□□□ 1.53
CCDC42-203ENST00000581598 CYP39A1Q9NYL5 469 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms