RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 ZMYND12Q9H0C1 365 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 PCDHA4Q9UN74 947 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 CNPY2Q9Y2B0 182 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 SMCO2A6NFE2 343 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 GOLGA6L22H0YM25 854 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 CXCL11O14625 94 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 KRT85P78386 507 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 PPP1R18Q6NYC8 613 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 FBXO11Q86XK2 927 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 BLIDQ8IZY5 108 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 ZNF396Q96N95 335 aaPredicted RBP15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 AMNQ9BXJ7 453 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 RANBP17Q9H2T7 1088 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 C6orf50Q9HD87 102 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 PCDHA1Q9Y5I3 950 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 TCHHQ07283 1943 aa15.9■□□□□ 0.14
CDK5RAP3-219ENST00000580670 PTPRFP10586 1907 aa15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 A0A0G2JLL6 359 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 ESYT2A0FGR8 921 aa15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 GNA11P29992 359 aa15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 MYSM1Q5VVJ2 828 aa15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 CST9Q5W186 159 aa15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 CCDC174Q6PII3 467 aa15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 PRRT2Q7Z6L0 340 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 DAGLBQ8NCG7 672 aa15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 TFIP11Q9UBB9 837 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 PPP1R9AQ9ULJ8 1098 aa15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 KCNH4Q9UQ05 1017 aa15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 MYH15Q9Y2K3 1946 aa15.89■□□□□ 0.13
CDK5RAP3-219ENST00000580670 ADAMTS3O15072 1205 aa15.88■□□□□ 0.13
CDK5RAP3-219ENST00000580670 FIBPO43427 364 aa15.88■□□□□ 0.13
CDK5RAP3-219ENST00000580670 USH1GQ495M9 461 aa15.88■□□□□ 0.13
CDK5RAP3-219ENST00000580670 GADL1Q6ZQY3 521 aa15.88■□□□□ 0.13
CDK5RAP3-219ENST00000580670 GDPD2Q9HCC8 539 aa15.88■□□□□ 0.13
CDK5RAP3-219ENST00000580670 TRPM7Q96QT4 1865 aa15.88■□□□□ 0.13
CDK5RAP3-219ENST00000580670 DDX11L8A8MPP1 907 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 USP17L15C9J2P7 530 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 USP17L13C9JLJ4 530 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 USP17L11C9JVI0 530 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 USP17L18D6R9N7 530 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 USP17L22D6RA61 530 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 USP17L17D6RBQ6 530 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 USP17L19D6RCP7 530 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 USP17L20D6RJB6 530 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 KIF3CO14782 793 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 GJA5P36382 358 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 ADCY7P51828 1080 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 USP17L24Q0WX57 530 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 CATSPERGQ6ZRH7 1159 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 TNFRSF25Q93038 417 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 CFAP45Q9UL16 551 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 TRAF1Q13077 416 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 TREML2Q5T2D2 321 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 ATL3Q6DD88 541 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 PROCA1Q8NCQ7 364 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 BICD2Q8TD16 824 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 RASGRP4Q8TDF6 673 aa15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 CTDP1Q9Y5B0 961 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-219ENST00000580670 M0R2N6 131 aa15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 TAL1P17542 331 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 CEBPZQ03701 1054 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 COG2Q14746 738 aa15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 NOM1Q5C9Z4 860 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 ATG4CQ96DT6 458 aa15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 WNK4Q96J92 1243 aa15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 USP28Q96RU2 1077 aa15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 FTOQ9C0B1 505 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 SCAND2PQ9GZW5 306 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 SLC38A10Q9HBR0 1119 aa15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 RIC8AQ9NPQ8 531 aa15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 PCDHA6Q9UN73 950 aa15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 PCDHA8Q9Y5H6 950 aa15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 LOC285556D6RIA3 1793 aa15.86■□□□□ 0.13
CDK5RAP3-219ENST00000580670 FAM205CA6NFA0 338 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 ZBED4O75132 1171 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 PRPF40AO75400 957 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 FDX1P10109 184 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 DSG3P32926 999 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 MRPL12P52815 198 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 SNAPC2Q13487 334 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 CSPP1Q1MSJ5 1256 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 EARS2Q5JPH6 523 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 L1TD1Q5T7N2 865 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 PIK3AP1Q6ZUJ8 805 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 REXO1Q8N1G1 1221 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 SMC1BQ8NDV3 1235 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 CUL5Q93034 780 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 PSTPIP2Q9H939 334 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 PARP14Q460N5 1801 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 PASKQ96RG2 1323 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 CCDC194A0A1B0GVG4 234 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 VWA5AO00534 786 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 ICAM1P05362 532 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 HUNKP57058 714 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 RILPL1Q5EBL4 403 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 FASTKD5Q7L8L6 764 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 SPATA32Q96LK8 384 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 GLT8D2Q9H1C3 349 aa15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 BIN2Q9UBW5 565 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-219ENST00000580670 CCPG1Q9ULG6 757 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms