RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 RCSD1Q6JBY9 416 aa29.23■■■□□ 2.27
CDC42EP4-205ENST00000580315 IQCA1Q86XH1 822 aa29.23■■■□□ 2.27
CDC42EP4-205ENST00000580315 REPS2Q8NFH8 660 aa29.23■■■□□ 2.27
CDC42EP4-205ENST00000580315 TMEM47Q9BQJ4 181 aa29.23■■■□□ 2.27
CDC42EP4-205ENST00000580315 TEX13BQ9BXU2 312 aa29.23■■■□□ 2.27
CDC42EP4-205ENST00000580315 KRT23Q9C075 422 aa29.23■■■□□ 2.27
CDC42EP4-205ENST00000580315 U3KPZ7 1027 aaPredicted RBP29.23■■■□□ 2.27
CDC42EP4-205ENST00000580315 KBTBD13C9JR72 458 aa29.22■■■□□ 2.27
CDC42EP4-205ENST00000580315 KDM4AO75164 1064 aa29.22■■■□□ 2.27
CDC42EP4-205ENST00000580315 FCER1AP12319 257 aa29.22■■■□□ 2.27
CDC42EP4-205ENST00000580315 PRAMEF19Q5SWL8 479 aa29.22■■■□□ 2.27
CDC42EP4-205ENST00000580315 SLC39A5Q6ZMH5 540 aa29.22■■■□□ 2.27
CDC42EP4-205ENST00000580315 DCAF4Q8WV16 495 aa29.22■■■□□ 2.27
CDC42EP4-205ENST00000580315 MTMR7Q9Y216 660 aa29.22■■■□□ 2.27
CDC42EP4-205ENST00000580315 ATP11BQ9Y2G3 1177 aa29.22■■■□□ 2.27
CDC42EP4-205ENST00000580315 POTEB2H3BUK9 544 aa29.21■■■□□ 2.27
CDC42EP4-205ENST00000580315 CHMP4CQ96CF2 233 aa29.21■■■□□ 2.27
CDC42EP4-205ENST00000580315 MAML3Q96JK9 1138 aa29.21■■■□□ 2.27
CDC42EP4-205ENST00000580315 SLC38A10Q9HBR0 1119 aa29.21■■■□□ 2.27
CDC42EP4-205ENST00000580315 ATP2A1O14983 1001 aa29.2■■■□□ 2.26
CDC42EP4-205ENST00000580315 PLA2G6O60733 806 aa29.2■■■□□ 2.26
CDC42EP4-205ENST00000580315 PTH1RQ03431 593 aa29.2■■■□□ 2.26
CDC42EP4-205ENST00000580315 CCDC96Q2M329 555 aa29.2■■■□□ 2.26
CDC42EP4-205ENST00000580315 FAM109BQ6ICB4 259 aaPredicted RBP29.2■■■□□ 2.26
CDC42EP4-205ENST00000580315 SNRNP48Q6IEG0 339 aaKnown RBP29.2■■■□□ 2.26
CDC42EP4-205ENST00000580315 KIAA1211Q6ZU35 1233 aa29.2■■■□□ 2.26
CDC42EP4-205ENST00000580315 KCTD1Q719H9 257 aa29.2■■■□□ 2.26
CDC42EP4-205ENST00000580315 B4E1Z4 1266 aa29.19■■■□□ 2.26
CDC42EP4-205ENST00000580315 MYCNP04198 464 aaPredicted RBP29.19■■■□□ 2.26
CDC42EP4-205ENST00000580315 OAZ1P54368 228 aa29.19■■■□□ 2.26
CDC42EP4-205ENST00000580315 KCTD2Q14681 263 aa29.19■■■□□ 2.26
CDC42EP4-205ENST00000580315 SKAP1Q86WV1 359 aa29.19■■■□□ 2.26
CDC42EP4-205ENST00000580315 DGKHQ86XP1 1220 aa29.19■■■□□ 2.26
CDC42EP4-205ENST00000580315 CPXCR1Q8N123 301 aa29.19■■■□□ 2.26
CDC42EP4-205ENST00000580315 MMP19Q99542 508 aa29.19■■■□□ 2.26
CDC42EP4-205ENST00000580315 ZKSCAN3Q9BRR0 538 aa29.19■■■□□ 2.26
CDC42EP4-205ENST00000580315 PARP14Q460N5 1801 aa29.19■■■□□ 2.26
CDC42EP4-205ENST00000580315 LAMA4Q16363 1823 aa29.18■■■□□ 2.26
CDC42EP4-205ENST00000580315 TRDNQ13061 729 aa29.18■■■□□ 2.26
CDC42EP4-205ENST00000580315 ADCYAP1R1P41586 468 aa29.17■■■□□ 2.26
CDC42EP4-205ENST00000580315 SNX17Q15036 470 aa29.17■■■□□ 2.26
CDC42EP4-205ENST00000580315 LRRC41Q15345 812 aa29.17■■■□□ 2.26
CDC42EP4-205ENST00000580315 ZSCAN10Q96SZ4 725 aaPredicted RBP29.17■■■□□ 2.26
CDC42EP4-205ENST00000580315 RAVER2Q9HCJ3 691 aaKnown RBP29.17■■■□□ 2.26
CDC42EP4-205ENST00000580315 UNC80Q8N2C7 3258 aa29.17■■■□□ 2.26
CDC42EP4-205ENST00000580315 SLC4A3P48751 1232 aa29.16■■■□□ 2.26
CDC42EP4-205ENST00000580315 TRIM60Q495X7 471 aa29.16■■■□□ 2.26
CDC42EP4-205ENST00000580315 UBAC1Q9BSL1 405 aa29.16■■■□□ 2.26
CDC42EP4-205ENST00000580315 ZSWIM5Q9P217 1185 aa29.16■■■□□ 2.26
CDC42EP4-205ENST00000580315 CASC1Q6TDU7 716 aa29.15■■■□□ 2.26
CDC42EP4-205ENST00000580315 MAP4K1Q92918 833 aa29.15■■■□□ 2.26
CDC42EP4-205ENST00000580315 FERMT2Q96AC1 680 aa29.15■■■□□ 2.26
CDC42EP4-205ENST00000580315 ESYT1Q9BSJ8 1104 aa29.15■■■□□ 2.26
CDC42EP4-205ENST00000580315 PRDM5Q9NQX1 630 aaPredicted RBP29.15■■■□□ 2.26
CDC42EP4-205ENST00000580315 PGK2P07205 417 aa29.14■■■□□ 2.26
CDC42EP4-205ENST00000580315 CYP21A2P08686 494 aa29.14■■■□□ 2.26
CDC42EP4-205ENST00000580315 RASGRP2Q7LDG7 609 aa29.14■■■□□ 2.26
CDC42EP4-205ENST00000580315 GUCD1Q96NT3 240 aa29.14■■■□□ 2.26
CDC42EP4-205ENST00000580315 KAT14Q9H8E8 782 aa29.14■■■□□ 2.26
CDC42EP4-205ENST00000580315 FBXO40Q9UH90 709 aa29.14■■■□□ 2.26
CDC42EP4-205ENST00000580315 NRBP1Q9UHY1 535 aa29.14■■■□□ 2.26
CDC42EP4-205ENST00000580315 PDHBP11177 359 aa29.13■■■□□ 2.25
CDC42EP4-205ENST00000580315 SHHQ15465 462 aa29.13■■■□□ 2.25
CDC42EP4-205ENST00000580315 C1orf53Q5VUE5 145 aa29.13■■■□□ 2.25
CDC42EP4-205ENST00000580315 CHST13Q8NET6 341 aa29.13■■■□□ 2.25
CDC42EP4-205ENST00000580315 ANKS1AQ92625 1134 aa29.13■■■□□ 2.25
CDC42EP4-205ENST00000580315 PRR12Q9ULL5 1215 aa29.13■■■□□ 2.25
CDC42EP4-205ENST00000580315 LTBP2Q14767 1821 aa29.13■■■□□ 2.25
CDC42EP4-205ENST00000580315 ERICH6BQ5W0A0 696 aa29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 RALYLQ86SE5 291 aaKnown RBP29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 BADQ92934 168 aa29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 FAM161BQ96MY7 647 aa29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 TINF2Q9BSI4 451 aa29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 GPCPD1Q9NPB8 672 aa29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 XPNPEP3Q9NQH7 507 aa29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 PDLIM7Q9NR12 457 aa29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 DIS3Q9Y2L1 958 aaKnown RBP29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 RIPK3Q9Y572 518 aa29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 RBM8AQ9Y5S9 174 aaKnown RBP29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 TNKSO95271 1327 aa29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 FRMPD2Q68DX3 1309 aaPredicted RBP29.12■■■□□ 2.25
CDC42EP4-205ENST00000580315 RARBP10826 455 aa29.11■■■□□ 2.25
CDC42EP4-205ENST00000580315 ZNF792Q3KQV3 632 aa29.11■■■□□ 2.25
CDC42EP4-205ENST00000580315 C9orf50Q5SZB4 431 aa29.11■■■□□ 2.25
CDC42EP4-205ENST00000580315 BTNL9Q6UXG8 535 aa29.11■■■□□ 2.25
CDC42EP4-205ENST00000580315 SH3RF1Q7Z6J0 888 aa29.11■■■□□ 2.25
CDC42EP4-205ENST00000580315 ENAHQ8N8S7 591 aaPredicted RBP29.11■■■□□ 2.25
CDC42EP4-205ENST00000580315 PNMA1Q8ND90 353 aa29.11■■■□□ 2.25
CDC42EP4-205ENST00000580315 DDX11Q96FC9 970 aa29.11■■■□□ 2.25
CDC42EP4-205ENST00000580315 PHF24Q9UPV7 400 aa29.11■■■□□ 2.25
CDC42EP4-205ENST00000580315 COL11A1P12107 1806 aaPredicted RBP29.1■■■□□ 2.25
CDC42EP4-205ENST00000580315 TRIM43BA6NCK2 446 aa29.1■■■□□ 2.25
CDC42EP4-205ENST00000580315 SNHG28P0DPA3 235 aa29.1■■■□□ 2.25
CDC42EP4-205ENST00000580315 ZNF543Q08ER8 600 aa29.1■■■□□ 2.25
CDC42EP4-205ENST00000580315 TKFCQ3LXA3 575 aa29.1■■■□□ 2.25
CDC42EP4-205ENST00000580315 GPATCH4Q5T3I0 446 aaKnown RBP29.1■■■□□ 2.25
CDC42EP4-205ENST00000580315 SYDE2Q5VT97 1194 aa29.1■■■□□ 2.25
CDC42EP4-205ENST00000580315 TTBK2Q6IQ55 1244 aa29.1■■■□□ 2.25
CDC42EP4-205ENST00000580315 TRIM43Q96BQ3 446 aaPredicted RBP29.1■■■□□ 2.25
CDC42EP4-205ENST00000580315 CDC45O75419 566 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms