RNA–Protein interactions for RNA: ENST00000579688.1

SPECC1-213, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-213ENST00000579688 TFAP4Q01664 338 aa23.18■■□□□ 1.3
SPECC1-213ENST00000579688 PPARAQ07869 468 aa23.18■■□□□ 1.3
SPECC1-213ENST00000579688 FAAP100Q0VG06 881 aa23.18■■□□□ 1.3
SPECC1-213ENST00000579688 ZMYM1Q5SVZ6 1142 aa23.18■■□□□ 1.3
SPECC1-213ENST00000579688 TOX2Q96NM4 488 aa23.18■■□□□ 1.3
SPECC1-213ENST00000579688 CDX2Q99626 313 aaPredicted RBP23.18■■□□□ 1.3
SPECC1-213ENST00000579688 SEMA6BQ9H3T3 888 aa23.18■■□□□ 1.3
SPECC1-213ENST00000579688 ABHD16BQ9H3Z7 469 aa23.18■■□□□ 1.3
SPECC1-213ENST00000579688 PCDHB15Q9Y5E8 787 aa23.18■■□□□ 1.3
SPECC1-213ENST00000579688 LRRC37A2A6NM11 1700 aa23.18■■□□□ 1.3
SPECC1-213ENST00000579688 CST5P28325 142 aaPredicted RBP23.17■■□□□ 1.3
SPECC1-213ENST00000579688 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.17■■□□□ 1.3
SPECC1-213ENST00000579688 RNPC3Q96LT9 517 aaKnown RBP23.17■■□□□ 1.3
SPECC1-213ENST00000579688 HOMER2Q9NSB8 354 aa23.17■■□□□ 1.3
SPECC1-213ENST00000579688 DCDC2CA8MYV0 355 aa23.16■■□□□ 1.3
SPECC1-213ENST00000579688 C6orf222P0C671 652 aaPredicted RBP23.16■■□□□ 1.3
SPECC1-213ENST00000579688 FDX1P10109 184 aa23.16■■□□□ 1.3
SPECC1-213ENST00000579688 STAT2P52630 851 aa23.16■■□□□ 1.3
SPECC1-213ENST00000579688 IRX5P78411 483 aaPredicted RBP23.16■■□□□ 1.3
SPECC1-213ENST00000579688 FPGSQ05932 587 aa23.16■■□□□ 1.3
SPECC1-213ENST00000579688 CCDC144BQ3MJ40 725 aa23.16■■□□□ 1.3
SPECC1-213ENST00000579688 ARMCX2Q7L311 632 aa23.16■■□□□ 1.3
SPECC1-213ENST00000579688 GMCL1Q96IK5 515 aa23.16■■□□□ 1.3
SPECC1-213ENST00000579688 UPF3AQ9H1J1 476 aaKnown RBP23.16■■□□□ 1.3
SPECC1-213ENST00000579688 TTYH1Q9H313 450 aaPredicted RBP23.16■■□□□ 1.3
SPECC1-213ENST00000579688 ISY1Q9ULR0 285 aaKnown RBP23.16■■□□□ 1.3
SPECC1-213ENST00000579688 ELP1O95163 1332 aa23.15■■□□□ 1.3
SPECC1-213ENST00000579688 TMEM232C9JQI7 657 aa23.15■■□□□ 1.3
SPECC1-213ENST00000579688 CCDC144CPQ8IYA2 1237 aa23.15■■□□□ 1.3
SPECC1-213ENST00000579688 GLT1D1Q96MS3 346 aa23.15■■□□□ 1.3
SPECC1-213ENST00000579688 KATNBL1Q9H079 304 aa23.15■■□□□ 1.3
SPECC1-213ENST00000579688 ZNF536O15090 1300 aa23.14■■□□□ 1.3
SPECC1-213ENST00000579688 LCTP09848 1927 aa23.14■■□□□ 1.3
SPECC1-213ENST00000579688 FOXP2O15409 715 aa23.14■■□□□ 1.29
SPECC1-213ENST00000579688 ASGR1P07306 291 aa23.14■■□□□ 1.29
SPECC1-213ENST00000579688 MX1P20591 662 aa23.14■■□□□ 1.29
SPECC1-213ENST00000579688 GJA9P57773 515 aa23.14■■□□□ 1.29
SPECC1-213ENST00000579688 CNTN2Q02246 1040 aa23.14■■□□□ 1.29
SPECC1-213ENST00000579688 FAM160B2Q86V87 743 aa23.14■■□□□ 1.29
SPECC1-213ENST00000579688 PCSK9Q8NBP7 692 aaKnown RBP23.14■■□□□ 1.29
SPECC1-213ENST00000579688 CHURC1Q8WUH1 139 aa23.14■■□□□ 1.29
SPECC1-213ENST00000579688 ACAD9Q9H845 621 aa23.14■■□□□ 1.29
SPECC1-213ENST00000579688 SPC25Q9HBM1 224 aa23.14■■□□□ 1.29
SPECC1-213ENST00000579688 TBX21Q9UL17 535 aa23.14■■□□□ 1.29
SPECC1-213ENST00000579688 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.14■■□□□ 1.29
SPECC1-213ENST00000579688 MROH7Q68CQ1 1323 aa23.13■■□□□ 1.29
SPECC1-213ENST00000579688 SLC1A4P43007 532 aa23.13■■□□□ 1.29
SPECC1-213ENST00000579688 IKQ13123 557 aaPredicted RBP23.13■■□□□ 1.29
SPECC1-213ENST00000579688 FAM133AQ8N9E0 248 aa23.13■■□□□ 1.29
SPECC1-213ENST00000579688 STAG1Q8WVM7 1258 aa23.13■■□□□ 1.29
SPECC1-213ENST00000579688 CHMP4CQ96CF2 233 aa23.13■■□□□ 1.29
SPECC1-213ENST00000579688 AGBL1Q96MI9 1066 aa23.13■■□□□ 1.29
SPECC1-213ENST00000579688 A1CFQ9NQ94 594 aaKnown RBP23.13■■□□□ 1.29
SPECC1-213ENST00000579688 RNF146Q9NTX7 359 aa23.13■■□□□ 1.29
SPECC1-213ENST00000579688 TIMP1P01033 207 aa23.12■■□□□ 1.29
SPECC1-213ENST00000579688 MCCP23508 829 aa23.12■■□□□ 1.29
SPECC1-213ENST00000579688 CDK7P50613 346 aa23.12■■□□□ 1.29
SPECC1-213ENST00000579688 GNASQ5JWF2 1037 aa23.12■■□□□ 1.29
SPECC1-213ENST00000579688 PPP4R3BQ5MIZ7 849 aa23.12■■□□□ 1.29
SPECC1-213ENST00000579688 CCDC129Q6ZRS4 1044 aa23.12■■□□□ 1.29
SPECC1-213ENST00000579688 MAFAQ8NHW3 353 aaPredicted RBP23.12■■□□□ 1.29
SPECC1-213ENST00000579688 MYLIPQ8WY64 445 aa23.12■■□□□ 1.29
SPECC1-213ENST00000579688 COL25A1Q9BXS0 654 aaPredicted RBP23.12■■□□□ 1.29
SPECC1-213ENST00000579688 STX8Q9UNK0 236 aa23.12■■□□□ 1.29
SPECC1-213ENST00000579688 SALL3Q9BXA9 1300 aa23.11■■□□□ 1.29
SPECC1-213ENST00000579688 TSPY2A6NKD2 308 aa23.11■■□□□ 1.29
SPECC1-213ENST00000579688 CTAGE5O15320 804 aa23.11■■□□□ 1.29
SPECC1-213ENST00000579688 PLA2G6O60733 806 aa23.11■■□□□ 1.29
SPECC1-213ENST00000579688 CTDSPL2Q05D32 466 aa23.11■■□□□ 1.29
SPECC1-213ENST00000579688 TMEM265A0A087WTH1 108 aa23.1■■□□□ 1.29
SPECC1-213ENST00000579688 A0A0U1RQG5 324 aaPredicted RBP23.1■■□□□ 1.29
SPECC1-213ENST00000579688 SOWAHBA6NEL2 793 aa23.1■■□□□ 1.29
SPECC1-213ENST00000579688 NMT2O60551 498 aa23.1■■□□□ 1.29
SPECC1-213ENST00000579688 NKX3-2P78367 333 aa23.1■■□□□ 1.29
SPECC1-213ENST00000579688 TKFCQ3LXA3 575 aa23.1■■□□□ 1.29
SPECC1-213ENST00000579688 KCTD1Q719H9 257 aa23.1■■□□□ 1.29
SPECC1-213ENST00000579688 VTI1AQ96AJ9 217 aa23.1■■□□□ 1.29
SPECC1-213ENST00000579688 INCENPQ9NQS7 918 aa23.1■■□□□ 1.29
SPECC1-213ENST00000579688 IL17RBQ9NRM6 502 aa23.1■■□□□ 1.29
SPECC1-213ENST00000579688 ARVCFO00192 962 aa23.09■■□□□ 1.29
SPECC1-213ENST00000579688 RCSD1Q6JBY9 416 aa23.09■■□□□ 1.29
SPECC1-213ENST00000579688 MFSD5Q6N075 450 aa23.09■■□□□ 1.29
SPECC1-213ENST00000579688 RASGRP2Q7LDG7 609 aa23.09■■□□□ 1.29
SPECC1-213ENST00000579688 TRERF1Q96PN7 1200 aa23.09■■□□□ 1.29
SPECC1-213ENST00000579688 PRR12Q9ULL5 1215 aa23.09■■□□□ 1.29
SPECC1-213ENST00000579688 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.08■■□□□ 1.29
SPECC1-213ENST00000579688 ASB14A6NK59 587 aa23.08■■□□□ 1.29
SPECC1-213ENST00000579688 ALAS1P13196 640 aa23.08■■□□□ 1.29
SPECC1-213ENST00000579688 SNAP25P60880 206 aa23.08■■□□□ 1.29
SPECC1-213ENST00000579688 TNFAIP2Q03169 654 aa23.08■■□□□ 1.29
SPECC1-213ENST00000579688 VPS53Q5VIR6 699 aa23.08■■□□□ 1.29
SPECC1-213ENST00000579688 CCDC174Q6PII3 467 aa23.08■■□□□ 1.29
SPECC1-213ENST00000579688 FAM126BQ8IXS8 530 aa23.08■■□□□ 1.29
SPECC1-213ENST00000579688 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.08■■□□□ 1.29
SPECC1-213ENST00000579688 ANAPC4Q9UJX5 808 aa23.08■■□□□ 1.29
SPECC1-213ENST00000579688 ASTN1O14525 1302 aa23.08■■□□□ 1.28
SPECC1-213ENST00000579688 SPTBN5Q9NRC6 3674 aaKnown RBP23.07■■□□□ 1.28
SPECC1-213ENST00000579688 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.07■■□□□ 1.28
SPECC1-213ENST00000579688 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.07■■□□□ 1.28
SPECC1-213ENST00000579688 DNAJB2P25686 324 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms