RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 ZNF830Q96NB3 372 aaPredicted RBP11.32□□□□□ -0.6
MSI2-209ENST00000579483 PARK7Q99497 189 aaKnown RBP11.32□□□□□ -0.6
MSI2-209ENST00000579483 PLA2G12BQ9BX93 195 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 RIPOR2Q9Y4F9 1068 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 LRRIQ4A6NIV6 560 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 USP17L15C9J2P7 530 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 USP17L13C9JLJ4 530 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 USP17L11C9JVI0 530 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 USP17L18D6R9N7 530 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 USP17L22D6RA61 530 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 USP17L17D6RBQ6 530 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 USP17L19D6RCP7 530 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 USP17L20D6RJB6 530 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 CYP2E1P05181 493 aaPredicted RBP11.32□□□□□ -0.6
MSI2-209ENST00000579483 TMEM191BP0C7N4 346 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 USP17L24Q0WX57 530 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 KIAA1841Q6NSI8 718 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 RNF207Q6ZRF8 634 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 CCDC155Q8N6L0 562 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 NAP1L3Q99457 506 aaPredicted RBP11.32□□□□□ -0.6
MSI2-209ENST00000579483 CCDC113Q9H0I3 377 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 HESX1Q9UBX0 185 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 MYO3AQ8NEV4 1616 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 PNPLA6Q8IY17 1366 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 KIAA0754O94854 1291 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 LONP1P36776 959 aaKnown RBP11.32□□□□□ -0.6
MSI2-209ENST00000579483 KIF11P52732 1056 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 LCORLQ8N3X6 602 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 PDCL2Q8N4E4 241 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 AK8Q96MA6 479 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 SPATA31D1Q6ZQQ2 1576 aa11.32□□□□□ -0.6
MSI2-209ENST00000579483 CCDC175P0C221 793 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 TUBB4BP68371 445 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 RNASELQ05823 741 aaKnown RBP11.31□□□□□ -0.6
MSI2-209ENST00000579483 MTX1Q13505 466 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 NKX1-1Q15270 411 aaPredicted RBP11.31□□□□□ -0.6
MSI2-209ENST00000579483 STXBP2Q15833 593 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 INF2Q27J81 1249 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 KCTD1Q719H9 257 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 TXNDC16Q9P2K2 825 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 PNMA6FA0A0J9YX94 578 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 C19orf81C9J6K1 198 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 GAP43P17677 238 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 GJC1P36383 396 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 AP3B2Q13367 1082 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 SNAPC2Q13487 334 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 ZSCAN30Q86W11 494 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 MTA3Q9BTC8 594 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 METTL14Q9HCE5 456 aaKnown RBP11.31□□□□□ -0.6
MSI2-209ENST00000579483 GINM1Q9NU53 330 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 SEPT9Q9UHD8 586 aaPredicted RBP11.31□□□□□ -0.6
MSI2-209ENST00000579483 PCDHA4Q9UN74 947 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 FER1L4A9Z1Z3 1794 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 PIK3C2BO00750 1634 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 ASB14A6NK59 587 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 ADCY5O95622 1261 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 FAM193AP78312 1265 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 MAP4K1Q92918 833 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 PPRC1Q5VV67 1664 aaKnown RBP11.31□□□□□ -0.6
MSI2-209ENST00000579483 A0A1B0GVL5 298 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 TNPO2O14787 897 aaKnown RBP11.31□□□□□ -0.6
MSI2-209ENST00000579483 FCER1AP12319 257 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 ZNF157P51786 506 aaPredicted RBP11.31□□□□□ -0.6
MSI2-209ENST00000579483 TYRO3Q06418 890 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 TMCO3Q6UWJ1 677 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 DYMQ7RTS9 669 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 CCDC102AQ96A19 550 aa11.31□□□□□ -0.6
MSI2-209ENST00000579483 K7ENM7 598 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 TAF1CQ15572 869 aaPredicted RBP11.3□□□□□ -0.6
MSI2-209ENST00000579483 SEL1L2Q5TEA6 688 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 MYOCDQ8IZQ8 938 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 AGBL3Q8NEM8 1001 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 TBC1D16Q8TBP0 767 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 CACTINQ8WUQ7 758 aaKnown RBP11.3□□□□□ -0.6
MSI2-209ENST00000579483 OTUD5Q96G74 571 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 FAM81BQ96LP2 452 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 ABCB11O95342 1321 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 KIDINS220Q9ULH0 1771 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 NDC80O14777 642 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 ENTPD3O75355 529 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 SNW1Q13573 536 aaKnown RBP11.3□□□□□ -0.6
MSI2-209ENST00000579483 KCNV1Q6PIU1 500 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 TCP11Q8WWU5 503 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 SEC62Q99442 399 aaKnown RBP11.3□□□□□ -0.6
MSI2-209ENST00000579483 MED10Q9BTT4 135 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 IQCGQ9H095 443 aaKnown RBP11.3□□□□□ -0.6
MSI2-209ENST00000579483 TECPR2O15040 1411 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 PTPREP23469 700 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 CDC37Q16543 378 aaPredicted RBP11.3□□□□□ -0.6
MSI2-209ENST00000579483 MYSM1Q5VVJ2 828 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 RCSD1Q6JBY9 416 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 SND1Q7KZF4 910 aaKnown RBP eCLIP11.3□□□□□ -0.6
MSI2-209ENST00000579483 CCDC94Q9BW85 323 aaPredicted RBP11.3□□□□□ -0.6
MSI2-209ENST00000579483 DNAJC25Q9H1X3 360 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 AGTPBP1Q9UPW5 1226 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 CTNND2Q9UQB3 1225 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 UTYO14607 1347 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 USP42Q9H9J4 1324 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms