RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 JAKMIP1Q96N16 626 aaKnown RBP11.71□□□□□ -0.53
MKS1-208ENST00000579358 MMP19Q99542 508 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 SLC5A4Q9NY91 659 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 MAD2L2Q9UI95 211 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 RIPK3Q9Y572 518 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 ZNF236Q9UL36 1845 aa11.7□□□□□ -0.54
MKS1-208ENST00000579358 PALM3A6NDB9 673 aaPredicted RBP11.7□□□□□ -0.54
MKS1-208ENST00000579358 KLRF2D3W0D1 207 aa11.7□□□□□ -0.54
MKS1-208ENST00000579358 HMGCRP04035 888 aa11.7□□□□□ -0.54
MKS1-208ENST00000579358 CYP2B6P20813 491 aa11.7□□□□□ -0.54
MKS1-208ENST00000579358 CCDC174Q6PII3 467 aa11.7□□□□□ -0.54
MKS1-208ENST00000579358 BLOC1S2Q6QNY1 142 aa11.7□□□□□ -0.54
MKS1-208ENST00000579358 NFXL1Q6ZNB6 911 aa11.7□□□□□ -0.54
MKS1-208ENST00000579358 ADGRF4Q8IZF3 695 aa11.7□□□□□ -0.54
MKS1-208ENST00000579358 TRIB2Q92519 343 aa11.7□□□□□ -0.54
MKS1-208ENST00000579358 UBA5Q9GZZ9 404 aa11.7□□□□□ -0.54
MKS1-208ENST00000579358 ACAD9Q9H845 621 aa11.7□□□□□ -0.54
MKS1-208ENST00000579358 GPHNQ9NQX3 736 aaPredicted RBP11.7□□□□□ -0.54
MKS1-208ENST00000579358 CCPG1Q9ULG6 757 aa11.7□□□□□ -0.54
MKS1-208ENST00000579358 CCDC85CA6NKD9 419 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 INHAP05111 366 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 ELNP15502 786 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 RPS6KB1P23443 525 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 KIF5BP33176 963 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 RCAN1P53805 252 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 ANAPC15P60006 121 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 SNAP25P60880 206 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 CDC37Q16543 378 aaPredicted RBP11.69□□□□□ -0.54
MKS1-208ENST00000579358 OLFML2BQ68BL8 750 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 DPP9Q86TI2 863 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 STAG2Q8N3U4 1231 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 FBXL16Q8N461 479 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 CTCFLQ8NI51 663 aaPredicted RBP11.69□□□□□ -0.54
MKS1-208ENST00000579358 MTMR8Q96EF0 704 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 AGBL1Q96MI9 1066 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 LRRC2Q9BYS8 371 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 TM6SF1Q9BZW5 370 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 RNF146Q9NTX7 359 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 DIS3Q9Y2L1 958 aaKnown RBP11.69□□□□□ -0.54
MKS1-208ENST00000579358 SLC12A7Q9Y666 1083 aa11.69□□□□□ -0.54
MKS1-208ENST00000579358 MGAMO43451 1857 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 DNAJC25-GNG10A0A024R161 153 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 COBLO75128 1261 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 IGHA2P01877 340 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 ALAS1P13196 640 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 CASTP20810 708 aaKnown RBP11.68□□□□□ -0.54
MKS1-208ENST00000579358 SMARCA1P28370 1054 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 GNAQP50148 359 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 C8orf34Q49A92 452 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 MAP3K21Q5TCX8 1036 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 APOA5Q6Q788 366 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 SYNE3Q6ZMZ3 975 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 NPLOC4Q8TAT6 608 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 NUP133Q8WUM0 1156 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 IL17RAQ96F46 866 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 TCEANC2Q96MN5 208 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 TRERF1Q96PN7 1200 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 AGXT2Q9BYV1 514 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 MAF1Q9H063 256 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 CPVLQ9H3G5 476 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 RIOX1Q9H6W3 641 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 JMJD4Q9H9V9 463 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 ZSWIM6Q9HCJ5 1215 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 HOMER2Q9NSB8 354 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 BIN2Q9UBW5 565 aaPredicted RBP11.68□□□□□ -0.54
MKS1-208ENST00000579358 GTF3C3Q9Y5Q9 886 aa11.68□□□□□ -0.54
MKS1-208ENST00000579358 PFASO15067 1338 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 DHX16O60231 1041 aaKnown RBP11.67□□□□□ -0.54
MKS1-208ENST00000579358 SLC4A3P48751 1232 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 CCL14Q16627 93 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 QRICH1Q2TAL8 776 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 ZNF792Q3KQV3 632 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 MFSD14CQ5VZR4 134 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 RUFY3Q7L099 469 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 ZNF467Q7Z7K2 595 aaPredicted RBP11.67□□□□□ -0.54
MKS1-208ENST00000579358 ANKRD35Q8N283 1001 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 MSL3Q8N5Y2 521 aaKnown RBP11.67□□□□□ -0.54
MKS1-208ENST00000579358 DDX11Q96FC9 970 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 MAML3Q96JK9 1138 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 LZTS2Q9BRK4 669 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 MYL10Q9BUA6 226 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 SPZ1Q9BXG8 430 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 A1CFQ9NQ94 594 aaKnown RBP11.67□□□□□ -0.54
MKS1-208ENST00000579358 HTTP42858 3142 aa11.67□□□□□ -0.54
MKS1-208ENST00000579358 ABCB11O95342 1321 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 RPTORQ8N122 1335 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 PLXNB2O15031 1838 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 ZBTB5O15062 677 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 ZBTB43O43298 467 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 CYTH3O43739 400 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 PGK2P07205 417 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 CPA1P15085 419 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 CAPN2P17655 700 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 FGD1P98174 961 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 TRAF1Q13077 416 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 MTFR1Q15390 333 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 SLC35G1Q2M3R5 365 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 MUM1L1Q5H9M0 696 aa11.66□□□□□ -0.54
MKS1-208ENST00000579358 Q6ZUG5 572 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms