RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 FLRT1Q9NZU1 646 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 RIPK3Q9Y572 518 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 DDX60LQ5H9U9 1706 aaKnown RBP7.66□□□□□ -1.18
TRAF4-213ENST00000578917 CDK5RAP2Q96SN8 1893 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 PTPDC1A2A3K4 754 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 SLC27A2O14975 620 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 MSCO60682 206 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 ICAM1P05362 532 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 MCM5P33992 734 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 NOVP48745 357 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 USH1GQ495M9 461 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 ASPRV1Q53RT3 343 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 MAP3K21Q5TCX8 1036 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 CREB3L3Q68CJ9 461 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 BTNL9Q6UXG8 535 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 SYNE3Q6ZMZ3 975 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 NOL8Q76FK4 1167 aaKnown RBP7.65□□□□□ -1.18
TRAF4-213ENST00000578917 RASGRP2Q7LDG7 609 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 NECAB2Q7Z6G3 386 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 TMTC2Q8N394 836 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 NUP133Q8WUM0 1156 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 PHIPQ8WWQ0 1821 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 ANKS1AQ92625 1134 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 PAWRQ96IZ0 340 aaKnown RBP7.65□□□□□ -1.18
TRAF4-213ENST00000578917 TINF2Q9BSI4 451 aa7.65□□□□□ -1.18
TRAF4-213ENST00000578917 LSG1Q9H089 658 aaKnown RBP7.65□□□□□ -1.18
TRAF4-213ENST00000578917 PAK6Q9NQU5 681 aaPredicted RBP7.65□□□□□ -1.18
TRAF4-213ENST00000578917 DIS3Q9Y2L1 958 aaKnown RBP7.65□□□□□ -1.18
TRAF4-213ENST00000578917 MYH7P12883 1935 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 ATAD5Q96QE3 1844 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 PFASO15067 1338 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 CCDC69A6NI79 296 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 KLRF2D3W0D1 207 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 PRC1O43663 620 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 REC8O95072 547 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 ZNF792Q3KQV3 632 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 ANO1Q5XXA6 986 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 ADGRF4Q8IZF3 695 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 ANKLE1Q8NAG6 615 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 ARRDC4Q8NCT1 418 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 MPHOSPH6Q99547 160 aaKnown RBP7.64□□□□□ -1.19
TRAF4-213ENST00000578917 CRISPLD2Q9H0B8 497 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 RANBP17Q9H2T7 1088 aaKnown RBP7.64□□□□□ -1.19
TRAF4-213ENST00000578917 CPVLQ9H3G5 476 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 DDX20Q9UHI6 824 aaKnown RBP7.64□□□□□ -1.19
TRAF4-213ENST00000578917 ZHX1Q9UKY1 873 aaPredicted RBP7.64□□□□□ -1.19
TRAF4-213ENST00000578917 NAP1L2Q9ULW6 460 aaPredicted RBP7.64□□□□□ -1.19
TRAF4-213ENST00000578917 NR2E3Q9Y5X4 410 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 TAF6LQ9Y6J9 622 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 LOC285556D6RIA3 1793 aa7.64□□□□□ -1.19
TRAF4-213ENST00000578917 CEP290O15078 2479 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 ZNF536O15090 1300 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 ASB14A6NK59 587 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 B4DLN1 442 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 KBTBD13C9JR72 458 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 SEPT4O43236 478 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 EVI5O60447 810 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 SNHG28P0DPA3 235 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 RARBP10826 455 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 CALML3P27482 149 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 KIF5BP33176 963 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 MRPL12P52815 198 aaKnown RBP7.63□□□□□ -1.19
TRAF4-213ENST00000578917 CNTN2Q02246 1040 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 TRAF1Q13077 416 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 BAATQ14032 418 aaPredicted RBP7.63□□□□□ -1.19
TRAF4-213ENST00000578917 KRT32Q14532 448 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 NECTIN1Q15223 517 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 CDC37Q16543 378 aaPredicted RBP7.63□□□□□ -1.19
TRAF4-213ENST00000578917 MUM1L1Q5H9M0 696 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 RNF207Q6ZRF8 634 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 FBXO11Q86XK2 927 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 MSL3Q8N5Y2 521 aaKnown RBP7.63□□□□□ -1.19
TRAF4-213ENST00000578917 CTCFLQ8NI51 663 aaPredicted RBP7.63□□□□□ -1.19
TRAF4-213ENST00000578917 PIBF1Q8WXW3 757 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 SHISA4Q96DD7 197 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 NEK1Q96PY6 1258 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 SENP6Q9GZR1 1112 aaPredicted RBP7.63□□□□□ -1.19
TRAF4-213ENST00000578917 C11orf49Q9H6J7 331 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 A1CFQ9NQ94 594 aaKnown RBP7.63□□□□□ -1.19
TRAF4-213ENST00000578917 ADD3Q9UEY8 706 aaKnown RBP7.63□□□□□ -1.19
TRAF4-213ENST00000578917 NRBP1Q9UHY1 535 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 FAM184BQ9ULE4 1060 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 SLC12A7Q9Y666 1083 aa7.63□□□□□ -1.19
TRAF4-213ENST00000578917 LAMB1P07942 1786 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 HMGB1P09429 215 aaKnown RBP7.62□□□□□ -1.19
TRAF4-213ENST00000578917 CALM1P0DP23 149 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 CALM2P0DP24 149 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 CALM3P0DP25 149 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 CYBAP13498 195 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 TAL1P17542 331 aaPredicted RBP7.62□□□□□ -1.19
TRAF4-213ENST00000578917 ACVR2BQ13705 512 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 SEC23AQ15436 765 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 LHX8Q68G74 356 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 STOX1Q6ZVD7 989 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 ZNF467Q7Z7K2 595 aaPredicted RBP7.62□□□□□ -1.19
TRAF4-213ENST00000578917 RNF180Q86T96 592 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 HOMER1Q86YM7 354 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 MCF2L2Q86YR7 1114 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 CCDC144CPQ8IYA2 1237 aa7.62□□□□□ -1.19
TRAF4-213ENST00000578917 MB21D2Q8IYB1 491 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms