RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ZNF713Q8N859 430 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 SMCR8Q8TEV9 937 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 CCDC12Q8WUD4 166 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 CHURC1Q8WUH1 139 aa16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 ASCC2Q9H1I8 757 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 BRMS1Q9HCU9 246 aa16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 PCDH10Q9P2E7 1040 aa16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 FEM1BQ9UK73 627 aa16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 V9GY48 417 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 CNTNAP5Q8WYK1 1306 aa16.07■□□□□ 0.16
CSNK1D-209ENST00000578904 GOLGA6L22H0YM25 854 aa16.06■□□□□ 0.16
CSNK1D-209ENST00000578904 CYP2C8P10632 490 aa16.06■□□□□ 0.16
CSNK1D-209ENST00000578904 FDPSP14324 419 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-209ENST00000578904 GNL2Q13823 731 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-209ENST00000578904 FAM160B2Q86V87 743 aa16.06■□□□□ 0.16
CSNK1D-209ENST00000578904 STAG2Q8N3U4 1231 aa16.06■□□□□ 0.16
CSNK1D-209ENST00000578904 KIFC2Q96AC6 838 aa16.06■□□□□ 0.16
CSNK1D-209ENST00000578904 SLF1Q9BQI6 1058 aa16.06■□□□□ 0.16
CSNK1D-209ENST00000578904 BEGAINQ9BUH8 593 aa16.06■□□□□ 0.16
CSNK1D-209ENST00000578904 SH3GLB2Q9NR46 395 aa16.06■□□□□ 0.16
CSNK1D-209ENST00000578904 FBXO28Q9NVF7 368 aa16.06■□□□□ 0.16
CSNK1D-209ENST00000578904 MYPNQ86TC9 1320 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 SPDYE16A6NNV3 312 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 SCG2P13521 617 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 HERVK_113P62684 666 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 FUT2Q10981 343 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 COG2Q14746 738 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 PFKFB3Q16875 520 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 TTBK2Q6IQ55 1244 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 CCDC148Q8NFR7 591 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 FBXO18Q8NFZ0 1043 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 GTF3C2Q8WUA4 911 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 RIOX1Q9H6W3 641 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 ZFYVE28Q9HCC9 887 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 RNF186Q9NXI6 227 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 PPP1R9AQ9ULJ8 1098 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 MTMR6Q9Y217 621 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 TCHHQ07283 1943 aa16.05■□□□□ 0.16
CSNK1D-209ENST00000578904 CA12O43570 354 aa16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 PLA2G6O60733 806 aa16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 F13A1P00488 732 aa16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 PTMSP20962 102 aa16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 CALML3P27482 149 aa16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 DSG3P32926 999 aa16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 SLC16A2P36021 539 aa16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 CTCFP49711 727 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 CRHR2Q13324 411 aa16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 SYDE2Q5VT97 1194 aa16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 MCTP1Q6DN14 999 aa16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 CMTR1Q8N1G2 835 aaKnown RBP16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 ATG4CQ96DT6 458 aa16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 P2RX7Q99572 595 aaKnown RBP16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 HOXC10Q9NYD6 342 aa16.04■□□□□ 0.16
CSNK1D-209ENST00000578904 PARP14Q460N5 1801 aa16.03■□□□□ 0.16
CSNK1D-209ENST00000578904 TRPA1O75762 1119 aa16.03■□□□□ 0.16
CSNK1D-209ENST00000578904 CSPP1Q1MSJ5 1256 aa16.03■□□□□ 0.16
CSNK1D-209ENST00000578904 GALNT17Q6IS24 598 aa16.03■□□□□ 0.16
CSNK1D-209ENST00000578904 PRPF38AQ8NAV1 312 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-209ENST00000578904 TNPO1Q92973 898 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-209ENST00000578904 UBA5Q9GZZ9 404 aa16.03■□□□□ 0.16
CSNK1D-209ENST00000578904 SAGE1Q9NXZ1 904 aa16.03■□□□□ 0.16
CSNK1D-209ENST00000578904 PNMA2Q9UL42 364 aa16.03■□□□□ 0.16
CSNK1D-209ENST00000578904 CTDP1Q9Y5B0 961 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-209ENST00000578904 MYH15Q9Y2K3 1946 aa16.03■□□□□ 0.16
CSNK1D-209ENST00000578904 A0A0G2JMZ2 1700 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 ADGRA2Q96PE1 1338 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 PNMA6FA0A0J9YX94 578 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 PPFIA3O75145 1194 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 TBC1D8O95759 1140 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 FDX1P10109 184 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 GCLCP48506 637 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 KRT40Q6A162 431 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 ATL3Q6DD88 541 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 BTNL9Q6UXG8 535 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 LBX2Q6XYB7 198 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 BRAPQ7Z569 592 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 PAGR1Q9BTK6 254 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 GLT8D2Q9H1C3 349 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 CPVLQ9H3G5 476 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 VAT1LQ9HCJ6 419 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 PRR12Q9ULL5 1215 aa16.02■□□□□ 0.16
CSNK1D-209ENST00000578904 RLFQ13129 1914 aa16.02■□□□□ 0.15
CSNK1D-209ENST00000578904 VWA5AO00534 786 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 TLR2O60603 784 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 GNA11P29992 359 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 FOSBP53539 338 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 NLRP5P59047 1200 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 PKP1Q13835 747 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 CLEC17AQ6ZS10 378 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 HOMER1Q86YM7 354 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 ADGRF4Q8IZF3 695 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 MB21D1Q8N884 522 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 BICD2Q8TD16 824 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 CFHR5Q9BXR6 569 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 WBP1LQ9NX94 342 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 CPA4Q9UI42 421 aa16.01■□□□□ 0.15
CSNK1D-209ENST00000578904 ZBTB5O15062 677 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 CYTH3O43739 400 aa16■□□□□ 0.15
CSNK1D-209ENST00000578904 ZBED4O75132 1171 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms