RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 GJA8P48165 433 aa16.93■□□□□ 0.3
MKS1-207ENST00000578789 KCTD2Q14681 263 aa16.93■□□□□ 0.3
MKS1-207ENST00000578789 TKFCQ3LXA3 575 aa16.93■□□□□ 0.3
MKS1-207ENST00000578789 ASPRV1Q53RT3 343 aa16.93■□□□□ 0.3
MKS1-207ENST00000578789 RNF20Q5VTR2 975 aa16.93■□□□□ 0.3
MKS1-207ENST00000578789 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.93■□□□□ 0.3
MKS1-207ENST00000578789 IFIT3O14879 490 aaKnown RBP16.92■□□□□ 0.3
MKS1-207ENST00000578789 ICAM1P05362 532 aa16.92■□□□□ 0.3
MKS1-207ENST00000578789 CAPN2P17655 700 aa16.92■□□□□ 0.3
MKS1-207ENST00000578789 MLLT1Q03111 559 aaPredicted RBP16.92■□□□□ 0.3
MKS1-207ENST00000578789 CACNB2Q08289 660 aaPredicted RBP16.92■□□□□ 0.3
MKS1-207ENST00000578789 SART3Q15020 963 aaKnown RBP16.92■□□□□ 0.3
MKS1-207ENST00000578789 AGBL1Q96MI9 1066 aa16.92■□□□□ 0.3
MKS1-207ENST00000578789 HMX1Q9NP08 348 aaPredicted RBP16.92■□□□□ 0.3
MKS1-207ENST00000578789 DIS3Q9Y2L1 958 aaKnown RBP16.92■□□□□ 0.3
MKS1-207ENST00000578789 DNAJC25-GNG10A0A024R161 153 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 ERICH2A1L162 156 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 GOLGA8HP0CJ92 632 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 SNAP25P60880 206 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 WTAPQ15007 396 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 ZNF792Q3KQV3 632 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 TSGA10IPQ3SY00 556 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 MFSD14CQ5VZR4 134 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 CCDC174Q6PII3 467 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 IGDCC4Q8TDY8 1250 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 U2AF1L4Q8WU68 220 aaKnown RBP16.91■□□□□ 0.3
MKS1-207ENST00000578789 MAML3Q96JK9 1138 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 ACAD9Q9H845 621 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 RNF146Q9NTX7 359 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 WDR19Q8NEZ3 1342 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 SMCHD1A6NHR9 2005 aa16.91■□□□□ 0.3
MKS1-207ENST00000578789 LCTP09848 1927 aa16.9■□□□□ 0.3
MKS1-207ENST00000578789 SGPL1O95470 568 aa16.9■□□□□ 0.3
MKS1-207ENST00000578789 PGK2P07205 417 aa16.9■□□□□ 0.3
MKS1-207ENST00000578789 PARP1P09874 1014 aaKnown RBP16.9■□□□□ 0.3
MKS1-207ENST00000578789 MCM5P33992 734 aa16.9■□□□□ 0.3
MKS1-207ENST00000578789 TMEM67Q5HYA8 995 aa16.9■□□□□ 0.3
MKS1-207ENST00000578789 CHST3Q7LGC8 479 aa16.9■□□□□ 0.3
MKS1-207ENST00000578789 KCNB2Q92953 911 aa16.9■□□□□ 0.3
MKS1-207ENST00000578789 CRISPLD2Q9H0B8 497 aa16.9■□□□□ 0.3
MKS1-207ENST00000578789 SENP2Q9HC62 589 aa16.9■□□□□ 0.3
MKS1-207ENST00000578789 PNMA2Q9UL42 364 aa16.9■□□□□ 0.3
MKS1-207ENST00000578789 CCPG1Q9ULG6 757 aa16.9■□□□□ 0.3
MKS1-207ENST00000578789 EPB41L2O43491 1005 aaKnown RBP16.89■□□□□ 0.29
MKS1-207ENST00000578789 PRC1O43663 620 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 REC8O95072 547 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 ALAS1P13196 640 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 CYBAP13498 195 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 SLC4A3P48751 1232 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 COL9A3Q14050 684 aaPredicted RBP16.89■□□□□ 0.29
MKS1-207ENST00000578789 GRM4Q14833 912 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 TMEM87BQ96K49 555 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 DEFB118Q96PH6 123 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 UBA5Q9GZZ9 404 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 LY9Q9HBG7 655 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 HOMER2Q9NSB8 354 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 MYH6P13533 1939 aa16.89■□□□□ 0.29
MKS1-207ENST00000578789 SH2B2O14492 632 aaPredicted RBP16.88■□□□□ 0.29
MKS1-207ENST00000578789 CCND3P30281 292 aaPredicted RBP16.88■□□□□ 0.29
MKS1-207ENST00000578789 CYP2C19P33261 490 aa16.88■□□□□ 0.29
MKS1-207ENST00000578789 HSPA4P34932 840 aa16.88■□□□□ 0.29
MKS1-207ENST00000578789 TROAPQ12815 778 aa16.88■□□□□ 0.29
MKS1-207ENST00000578789 ZNF467Q7Z7K2 595 aaPredicted RBP16.88■□□□□ 0.29
MKS1-207ENST00000578789 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
MKS1-207ENST00000578789 ANKRD35Q8N283 1001 aa16.88■□□□□ 0.29
MKS1-207ENST00000578789 MSL3Q8N5Y2 521 aaKnown RBP16.88■□□□□ 0.29
MKS1-207ENST00000578789 DDX11Q96FC9 970 aa16.88■□□□□ 0.29
MKS1-207ENST00000578789 TRERF1Q96PN7 1200 aa16.88■□□□□ 0.29
MKS1-207ENST00000578789 CPVLQ9H3G5 476 aa16.88■□□□□ 0.29
MKS1-207ENST00000578789 A1CFQ9NQ94 594 aaKnown RBP16.88■□□□□ 0.29
MKS1-207ENST00000578789 NRBP1Q9UHY1 535 aa16.88■□□□□ 0.29
MKS1-207ENST00000578789 MAD2L2Q9UI95 211 aa16.88■□□□□ 0.29
MKS1-207ENST00000578789 PALM3A6NDB9 673 aaPredicted RBP16.87■□□□□ 0.29
MKS1-207ENST00000578789 LIFRP42702 1097 aa16.87■□□□□ 0.29
MKS1-207ENST00000578789 KRT32Q14532 448 aa16.87■□□□□ 0.29
MKS1-207ENST00000578789 CDC37Q16543 378 aaPredicted RBP16.87■□□□□ 0.29
MKS1-207ENST00000578789 MUM1L1Q5H9M0 696 aa16.87■□□□□ 0.29
MKS1-207ENST00000578789 UBE2Q1Q7Z7E8 422 aa16.87■□□□□ 0.29
MKS1-207ENST00000578789 ADGRF4Q8IZF3 695 aa16.87■□□□□ 0.29
MKS1-207ENST00000578789 STAG2Q8N3U4 1231 aa16.87■□□□□ 0.29
MKS1-207ENST00000578789 TRPV1Q8NER1 839 aa16.87■□□□□ 0.29
MKS1-207ENST00000578789 FGD4Q96M96 766 aa16.87■□□□□ 0.29
MKS1-207ENST00000578789 PFASO15067 1338 aa16.87■□□□□ 0.29
MKS1-207ENST00000578789 LRRC37A2A6NM11 1700 aa16.87■□□□□ 0.29
MKS1-207ENST00000578789 DDAH1O94760 285 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 TAL1P17542 331 aaPredicted RBP16.86■□□□□ 0.29
MKS1-207ENST00000578789 ADCK5Q3MIX3 580 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 MAMDC4Q6UXC1 1216 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 CATIPQ7Z7H3 387 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 ZNF654Q8IZM8 581 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 FAM133AQ8N9E0 248 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 MTMR8Q96EF0 704 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 NEK1Q96PY6 1258 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 MAP3K14Q99558 947 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 TINF2Q9BSI4 451 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 GPHNQ9NQX3 736 aaPredicted RBP16.86■□□□□ 0.29
MKS1-207ENST00000578789 OGDHLQ9ULD0 1010 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 SYNGAP1Q96PV0 1343 aa16.86■□□□□ 0.29
MKS1-207ENST00000578789 BRCA2P51587 3418 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms