RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 CACNB2Q08289 660 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-208ENST00000578501 TRDNQ13061 729 aa16.02■□□□□ 0.16
CSNK1D-208ENST00000578501 IKQ13123 557 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-208ENST00000578501 KCTD2Q14681 263 aa16.02■□□□□ 0.16
CSNK1D-208ENST00000578501 CPXCR1Q8N123 301 aa16.02■□□□□ 0.16
CSNK1D-208ENST00000578501 ENAHQ8N8S7 591 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-208ENST00000578501 CHST13Q8NET6 341 aa16.02■□□□□ 0.16
CSNK1D-208ENST00000578501 ZKSCAN3Q9BRR0 538 aa16.02■□□□□ 0.16
CSNK1D-208ENST00000578501 PRR12Q9ULL5 1215 aa16.02■□□□□ 0.16
CSNK1D-208ENST00000578501 ISY1Q9ULR0 285 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-208ENST00000578501 RIPK3Q9Y572 518 aa16.02■□□□□ 0.16
CSNK1D-208ENST00000578501 MAGEA10P43363 369 aaPredicted RBP16.01■□□□□ 0.15
CSNK1D-208ENST00000578501 CCDC96Q2M329 555 aa16.01■□□□□ 0.15
CSNK1D-208ENST00000578501 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.01■□□□□ 0.15
CSNK1D-208ENST00000578501 DIS3LQ8TF46 1054 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-208ENST00000578501 UBAC1Q9BSL1 405 aa16.01■□□□□ 0.15
CSNK1D-208ENST00000578501 UBE2OQ9C0C9 1292 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-208ENST00000578501 LSG1Q9H089 658 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-208ENST00000578501 RAVER2Q9HCJ3 691 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-208ENST00000578501 FBXO40Q9UH90 709 aa16.01■□□□□ 0.15
CSNK1D-208ENST00000578501 RBM8AQ9Y5S9 174 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-208ENST00000578501 COL6A3P12111 3177 aa16.01■□□□□ 0.15
CSNK1D-208ENST00000578501 ZNF536O15090 1300 aa16■□□□□ 0.15
CSNK1D-208ENST00000578501 TNKSO95271 1327 aa16■□□□□ 0.15
CSNK1D-208ENST00000578501 ZNF543Q08ER8 600 aa16■□□□□ 0.15
CSNK1D-208ENST00000578501 ZNF792Q3KQV3 632 aa16■□□□□ 0.15
CSNK1D-208ENST00000578501 TKFCQ3LXA3 575 aa16■□□□□ 0.15
CSNK1D-208ENST00000578501 GPATCH4Q5T3I0 446 aaKnown RBP16■□□□□ 0.15
CSNK1D-208ENST00000578501 CASC1Q6TDU7 716 aa16■□□□□ 0.15
CSNK1D-208ENST00000578501 RASGRP2Q7LDG7 609 aa16■□□□□ 0.15
CSNK1D-208ENST00000578501 PNMA1Q8ND90 353 aa16■□□□□ 0.15
CSNK1D-208ENST00000578501 MAML3Q96JK9 1138 aa16■□□□□ 0.15
CSNK1D-208ENST00000578501 RANBP17Q9H2T7 1088 aaKnown RBP16■□□□□ 0.15
CSNK1D-208ENST00000578501 C11orf49Q9H6J7 331 aa16■□□□□ 0.15
CSNK1D-208ENST00000578501 KAT14Q9H8E8 782 aa16■□□□□ 0.15
CSNK1D-208ENST00000578501 MTMR7Q9Y216 660 aa16■□□□□ 0.15
CSNK1D-208ENST00000578501 LAMA3Q16787 3333 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 DNAJC25-GNG10A0A024R161 153 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 E7EWF7 191 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 SYN1P17600 705 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 SEC23AQ15436 765 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 SYDE2Q5VT97 1194 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 TTBK2Q6IQ55 1244 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 MSL3Q8N5Y2 521 aaKnown RBP15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 NCOA7Q8NI08 942 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 CHMP4CQ96CF2 233 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 PPP4R2Q9NY27 417 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 NRBP1Q9UHY1 535 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 PNMA2Q9UL42 364 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 OGDHLQ9ULD0 1010 aa15.99■□□□□ 0.15
CSNK1D-208ENST00000578501 FRMPD2Q68DX3 1309 aaPredicted RBP15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 CDC45O75419 566 aa15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 CCND3P30281 292 aaPredicted RBP15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 CYP2C19P33261 490 aa15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 SLC16A2P36021 539 aa15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 NECTIN1Q15223 517 aa15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 IFIT1BQ5T764 474 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 FAM109BQ6ICB4 259 aaPredicted RBP15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 CYB5R4Q7L1T6 521 aa15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 RALYLQ86SE5 291 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 AGBL1Q96MI9 1066 aa15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 GPCPD1Q9NPB8 672 aa15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 TAF6LQ9Y6J9 622 aa15.98■□□□□ 0.15
CSNK1D-208ENST00000578501 MSCO60682 206 aa15.97■□□□□ 0.15
CSNK1D-208ENST00000578501 ICAM1P05362 532 aa15.97■□□□□ 0.15
CSNK1D-208ENST00000578501 PGK2P07205 417 aa15.97■□□□□ 0.15
CSNK1D-208ENST00000578501 CYBAP13498 195 aa15.97■□□□□ 0.15
CSNK1D-208ENST00000578501 ASPRV1Q53RT3 343 aa15.97■□□□□ 0.15
CSNK1D-208ENST00000578501 LHX8Q68G74 356 aa15.97■□□□□ 0.15
CSNK1D-208ENST00000578501 STOX1Q6ZVD7 989 aa15.97■□□□□ 0.15
CSNK1D-208ENST00000578501 ZNF467Q7Z7K2 595 aaPredicted RBP15.97■□□□□ 0.15
CSNK1D-208ENST00000578501 DDX11Q96FC9 970 aa15.97■□□□□ 0.15
CSNK1D-208ENST00000578501 MTA3Q9BTC8 594 aa15.97■□□□□ 0.15
CSNK1D-208ENST00000578501 ACAD9Q9H845 621 aa15.97■□□□□ 0.15
CSNK1D-208ENST00000578501 ANO2Q9NQ90 1003 aa15.97■□□□□ 0.15
CSNK1D-208ENST00000578501 A0A0C4DFX4 3053 aa15.96■□□□□ 0.15
CSNK1D-208ENST00000578501 ZNFX1Q9P2E3 1918 aaKnown RBP15.96■□□□□ 0.15
CSNK1D-208ENST00000578501 SLC4A3P48751 1232 aa15.96■□□□□ 0.15
CSNK1D-208ENST00000578501 SART3Q15020 963 aaKnown RBP15.96■□□□□ 0.15
CSNK1D-208ENST00000578501 CCDC174Q6PII3 467 aa15.96■□□□□ 0.15
CSNK1D-208ENST00000578501 MAMDC4Q6UXC1 1216 aa15.96■□□□□ 0.15
CSNK1D-208ENST00000578501 MB21D2Q8IYB1 491 aaPredicted RBP15.96■□□□□ 0.15
CSNK1D-208ENST00000578501 ANKRD35Q8N283 1001 aa15.96■□□□□ 0.15
CSNK1D-208ENST00000578501 TRPV1Q8NER1 839 aa15.96■□□□□ 0.15
CSNK1D-208ENST00000578501 TRERF1Q96PN7 1200 aa15.96■□□□□ 0.15
CSNK1D-208ENST00000578501 TINF2Q9BSI4 451 aa15.96■□□□□ 0.15
CSNK1D-208ENST00000578501 RNF146Q9NTX7 359 aa15.96■□□□□ 0.15
CSNK1D-208ENST00000578501 ALPK3Q96L96 1907 aa15.96■□□□□ 0.14
CSNK1D-208ENST00000578501 ERICH2A1L162 156 aa15.95■□□□□ 0.14
CSNK1D-208ENST00000578501 SLC27A2O14975 620 aa15.95■□□□□ 0.14
CSNK1D-208ENST00000578501 PARP1P09874 1014 aaKnown RBP15.95■□□□□ 0.14
CSNK1D-208ENST00000578501 ALAS1P13196 640 aa15.95■□□□□ 0.14
CSNK1D-208ENST00000578501 SNAP25P60880 206 aa15.95■□□□□ 0.14
CSNK1D-208ENST00000578501 CREB3L3Q68CJ9 461 aa15.95■□□□□ 0.14
CSNK1D-208ENST00000578501 HOMER2Q9NSB8 354 aa15.95■□□□□ 0.14
CSNK1D-208ENST00000578501 DDX20Q9UHI6 824 aaKnown RBP15.95■□□□□ 0.14
CSNK1D-208ENST00000578501 CCPG1Q9ULG6 757 aa15.95■□□□□ 0.14
CSNK1D-208ENST00000578501 PFASO15067 1338 aa15.94■□□□□ 0.14
CSNK1D-208ENST00000578501 WDR19Q8NEZ3 1342 aa15.94■□□□□ 0.14
CSNK1D-208ENST00000578501 SYNGAP1Q96PV0 1343 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms