RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 SLF1Q9BQI6 1058 aa15.44■□□□□ 0.06
SRSF1-202ENST00000578430 MYPNQ86TC9 1320 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 A0A0G2JLL6 359 aaPredicted RBP15.43■□□□□ 0.06
SRSF1-202ENST00000578430 USP17L15C9J2P7 530 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 USP17L13C9JLJ4 530 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 USP17L11C9JVI0 530 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 USP17L18D6R9N7 530 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 USP17L22D6RA61 530 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 USP17L17D6RBQ6 530 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 USP17L19D6RCP7 530 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 USP17L20D6RJB6 530 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 BAG4O95429 457 aaKnown RBP15.43■□□□□ 0.06
SRSF1-202ENST00000578430 KRT2P35908 639 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 NAPAP54920 295 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 USP17L24Q0WX57 530 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 QRICH1Q2TAL8 776 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 PRRT2Q7Z6L0 340 aaPredicted RBP15.43■□□□□ 0.06
SRSF1-202ENST00000578430 FERMT3Q86UX7 667 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 DIS3L2Q8IYB7 885 aaKnown RBP15.43■□□□□ 0.06
SRSF1-202ENST00000578430 BICD2Q8TD16 824 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 GPKOWQ92917 476 aaPredicted RBP eCLIP15.43■□□□□ 0.06
SRSF1-202ENST00000578430 OPTNQ96CV9 577 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 OTUD5Q96G74 571 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 AMNQ9BXJ7 453 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 TANGO6Q9C0B7 1094 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 ZMYND12Q9H0C1 365 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 RANBP17Q9H2T7 1088 aaKnown RBP15.43■□□□□ 0.06
SRSF1-202ENST00000578430 RPAP3Q9H6T3 665 aaPredicted RBP15.43■□□□□ 0.06
SRSF1-202ENST00000578430 C6orf50Q9HD87 102 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 GJB4Q9NTQ9 266 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 KCNJ14Q9UNX9 436 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 TRPM7Q96QT4 1865 aa15.43■□□□□ 0.06
SRSF1-202ENST00000578430 GOLGA6L22H0YM25 854 aa15.42■□□□□ 0.06
SRSF1-202ENST00000578430 IRF6O14896 467 aa15.42■□□□□ 0.06
SRSF1-202ENST00000578430 PTMSP20962 102 aa15.42■□□□□ 0.06
SRSF1-202ENST00000578430 FASTKD5Q7L8L6 764 aaKnown RBP15.42■□□□□ 0.06
SRSF1-202ENST00000578430 FBXO11Q86XK2 927 aa15.42■□□□□ 0.06
SRSF1-202ENST00000578430 KIFC2Q96AC6 838 aa15.42■□□□□ 0.06
SRSF1-202ENST00000578430 ZNF396Q96N95 335 aaPredicted RBP15.42■□□□□ 0.06
SRSF1-202ENST00000578430 PPP1R9AQ9ULJ8 1098 aa15.42■□□□□ 0.06
SRSF1-202ENST00000578430 PCDHA4Q9UN74 947 aa15.42■□□□□ 0.06
SRSF1-202ENST00000578430 PASKQ96RG2 1323 aa15.42■□□□□ 0.06
SRSF1-202ENST00000578430 FLOT1O75955 427 aa15.41■□□□□ 0.06
SRSF1-202ENST00000578430 FMR1Q06787 632 aaKnown RBP eCLIP15.41■□□□□ 0.06
SRSF1-202ENST00000578430 PABPC4Q13310 644 aaKnown RBP eCLIP15.41■□□□□ 0.06
SRSF1-202ENST00000578430 SNAPC2Q13487 334 aa15.41■□□□□ 0.06
SRSF1-202ENST00000578430 COG2Q14746 738 aa15.41■□□□□ 0.06
SRSF1-202ENST00000578430 CSPP1Q1MSJ5 1256 aa15.41■□□□□ 0.06
SRSF1-202ENST00000578430 CST9Q5W186 159 aa15.41■□□□□ 0.06
SRSF1-202ENST00000578430 MCTP2Q6DN12 878 aa15.41■□□□□ 0.06
SRSF1-202ENST00000578430 CATSPERGQ6ZRH7 1159 aa15.41■□□□□ 0.06
SRSF1-202ENST00000578430 NOSTRINQ8IVI9 506 aa15.41■□□□□ 0.06
SRSF1-202ENST00000578430 BLIDQ8IZY5 108 aa15.41■□□□□ 0.06
SRSF1-202ENST00000578430 SHISA4Q96DD7 197 aa15.41■□□□□ 0.06
SRSF1-202ENST00000578430 HOXC10Q9NYD6 342 aa15.41■□□□□ 0.06
SRSF1-202ENST00000578430 CFAP45Q9UL16 551 aa15.41■□□□□ 0.06
SRSF1-202ENST00000578430 LOC285556D6RIA3 1793 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 SMCO2A6NFE2 343 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 DDX11L8A8MPP1 907 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 BTBD18B2RXH4 712 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 FOXN1O15353 648 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 PPP1R11O60927 126 aaPredicted RBP15.4■□□□□ 0.06
SRSF1-202ENST00000578430 ZBED4O75132 1171 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 ZBTB48P10074 688 aaPredicted RBP15.4■□□□□ 0.06
SRSF1-202ENST00000578430 HOXA7P31268 230 aaPredicted RBP15.4■□□□□ 0.06
SRSF1-202ENST00000578430 MRPL12P52815 198 aaKnown RBP15.4■□□□□ 0.06
SRSF1-202ENST00000578430 KRT85P78386 507 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 NPY5RQ15761 445 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 TYW1BQ6NUM6 668 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 WNK4Q96J92 1243 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 SLC38A10Q9HBR0 1119 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 FBXO28Q9NVF7 368 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 CTDP1Q9Y5B0 961 aaPredicted RBP15.4■□□□□ 0.06
SRSF1-202ENST00000578430 PCDHA1Q9Y5I3 950 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 PTPRFP10586 1907 aa15.4■□□□□ 0.06
SRSF1-202ENST00000578430 KIF28PB7ZC32 967 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 ICAM1P05362 532 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 MCM4P33991 863 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 ADCY7P51828 1080 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 OAZ1P54368 228 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 MYSM1Q5VVJ2 828 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 CUL5Q93034 780 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 TNFRSF25Q93038 417 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 COA7Q96BR5 231 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 SCAND2PQ9GZW5 306 aaPredicted RBP15.39■□□□□ 0.05
SRSF1-202ENST00000578430 RIC8AQ9NPQ8 531 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 ADAMTS5Q9UNA0 930 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 AGTPBP1Q9UPW5 1226 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 ABCB11O95342 1321 aa15.39■□□□□ 0.05
SRSF1-202ENST00000578430 M0R2N6 131 aa15.38■□□□□ 0.05
SRSF1-202ENST00000578430 CETPP11597 493 aa15.38■□□□□ 0.05
SRSF1-202ENST00000578430 TRAPPC10P48553 1259 aa15.38■□□□□ 0.05
SRSF1-202ENST00000578430 GTF2A2P52657 109 aa15.38■□□□□ 0.05
SRSF1-202ENST00000578430 HUNKP57058 714 aa15.38■□□□□ 0.05
SRSF1-202ENST00000578430 DNM1Q05193 864 aaKnown RBP15.38■□□□□ 0.05
SRSF1-202ENST00000578430 DGKZQ13574 1117 aa15.38■□□□□ 0.05
SRSF1-202ENST00000578430 RILPL1Q5EBL4 403 aa15.38■□□□□ 0.05
SRSF1-202ENST00000578430 GADL1Q6ZQY3 521 aa15.38■□□□□ 0.05
SRSF1-202ENST00000578430 MAF1Q9H063 256 aa15.38■□□□□ 0.05
SRSF1-202ENST00000578430 PSTPIP2Q9H939 334 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms