RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 SYNPO2Q9UMS6 1093 aa9.37□□□□□ -0.91
SKA2-203ENST00000578105 DAGLAQ9Y4D2 1042 aa9.37□□□□□ -0.91
SKA2-203ENST00000578105 COL2A1P02458 1487 aaPredicted RBP9.36□□□□□ -0.91
SKA2-203ENST00000578105 KLRF2D3W0D1 207 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 UBE2Q2LH0YL09 131 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 STXBP3O00186 592 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 BIN1O00499 593 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 NMT2O60551 498 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 SNHG28P0DPA3 235 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 ZNF18P17022 549 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 CCZ1BP86790 482 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 CCZ1P86791 482 aaPredicted RBP9.36□□□□□ -0.91
SKA2-203ENST00000578105 DPYDQ12882 1025 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 KCNB1Q14721 858 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 NONOQ15233 471 aaKnown RBP eCLIP9.36□□□□□ -0.91
SKA2-203ENST00000578105 CCDC144BQ3MJ40 725 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 FILIP1LQ4L180 1135 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 GPATCH4Q5T3I0 446 aaKnown RBP9.36□□□□□ -0.91
SKA2-203ENST00000578105 SPATA1Q5VX52 437 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 DTHD1Q6ZMT9 781 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 FOXP4Q8IVH2 680 aaPredicted RBP9.36□□□□□ -0.91
SKA2-203ENST00000578105 VSTM4Q8IW00 320 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 SUPT20HQ8NEM7 779 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 ANKRD20A12PQ8NF67 263 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 TEKT1Q969V4 418 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 SHISA4Q96DD7 197 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 DYNLL2Q96FJ2 89 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 PAGE5Q96GU1 130 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 SERPINB13Q9UIV8 391 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 STX8Q9UNK0 236 aa9.36□□□□□ -0.91
SKA2-203ENST00000578105 IGKV6D-41A0A0C4DH26 115 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 TTLL1O95922 423 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 GTF2IP78347 998 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 ZNF174Q15697 407 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 E2F4Q16254 413 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 TPD52L1Q16890 204 aaPredicted RBP9.35□□□□□ -0.91
SKA2-203ENST00000578105 CFAP100Q494V2 611 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 STRIP1Q5VSL9 837 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 TMC6Q7Z403 805 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 FILIP1Q7Z7B0 1213 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 C4orf32Q8N8J7 132 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 NOC3LQ8WTT2 800 aaKnown RBP9.35□□□□□ -0.91
SKA2-203ENST00000578105 CNKSR1Q969H4 720 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 DHX58Q96C10 678 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 NAA15Q9BXJ9 866 aaKnown RBP9.35□□□□□ -0.91
SKA2-203ENST00000578105 RAB34Q9BZG1 259 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 LRRC27Q9C0I9 530 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 HSD3B7Q9H2F3 369 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 MTMR4Q9NYA4 1195 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 NRBP1Q9UHY1 535 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 PCDHA6Q9UN73 950 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 PCDHA8Q9Y5H6 950 aa9.35□□□□□ -0.91
SKA2-203ENST00000578105 VWA3AA6NCI4 1184 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 USP17L3A6NCW0 530 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 USP17L4A6NCW7 530 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 SMIM22K7EJ46 135 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 ARHGAP6O43182 974 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 ZSCAN12O43309 604 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 CHRM1P11229 460 aaPredicted RBP9.34□□□□□ -0.91
SKA2-203ENST00000578105 TNNT1P13805 278 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 PRKCSHP14314 528 aaPredicted RBP9.34□□□□□ -0.91
SKA2-203ENST00000578105 ATP2B1P20020 1258 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 CDK11BP21127 795 aaKnown RBP9.34□□□□□ -0.91
SKA2-203ENST00000578105 LMOD1P29536 600 aaPredicted RBP9.34□□□□□ -0.91
SKA2-203ENST00000578105 PSEN2P49810 448 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 NAPAP54920 295 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 AMPD3Q01432 767 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 GRIN1Q05586 938 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 TRAF1Q13077 416 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 STIM1Q13586 685 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 TRIM14Q14142 442 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 PTPN14Q15678 1187 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 COBLL1Q53SF7 1204 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 EARS2Q5JPH6 523 aaKnown RBP9.34□□□□□ -0.91
SKA2-203ENST00000578105 ZNF658Q5TYW1 1059 aaPredicted RBP9.34□□□□□ -0.91
SKA2-203ENST00000578105 WWC2Q6AWC2 1192 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 NYAP1Q6ZVC0 841 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 USP17L1Q7RTZ2 530 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 NEK8Q86SG6 692 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 CCDC51Q96ER9 411 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 ZDHHC15Q96MV8 337 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 IDI2Q9BXS1 227 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 VPS33BQ9H267 617 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 TMX1Q9H3N1 280 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 DISC1Q9NRI5 854 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 RWDD2AQ9UIY3 292 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 NFE2L3Q9Y4A8 694 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 MYH8P13535 1937 aa9.34□□□□□ -0.91
SKA2-203ENST00000578105 GREB1LQ9C091 1923 aaPredicted RBP9.34□□□□□ -0.91
SKA2-203ENST00000578105 ITIH6Q6UXX5 1313 aa9.33□□□□□ -0.92
SKA2-203ENST00000578105 A0A1B0GTH6 734 aa9.33□□□□□ -0.92
SKA2-203ENST00000578105 H0YIN7 160 aa9.33□□□□□ -0.92
SKA2-203ENST00000578105 CYTH3O43739 400 aa9.33□□□□□ -0.92
SKA2-203ENST00000578105 STX10O60499 249 aa9.33□□□□□ -0.92
SKA2-203ENST00000578105 OR52Z1P0C646 297 aa9.33□□□□□ -0.92
SKA2-203ENST00000578105 PDHBP11177 359 aa9.33□□□□□ -0.92
SKA2-203ENST00000578105 GCFC2P16383 781 aaKnown RBP9.33□□□□□ -0.92
SKA2-203ENST00000578105 BMP6P22004 513 aa9.33□□□□□ -0.92
SKA2-203ENST00000578105 MCM7P33993 719 aa9.33□□□□□ -0.92
SKA2-203ENST00000578105 UBA7P41226 1012 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms