RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 TOP1P11387 765 aaKnown RBP17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 CCDC129Q6ZRS4 1044 aa17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 PLEKHM2Q8IWE5 1019 aa17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 CPXCR1Q8N123 301 aa17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 ANKRD35Q8N283 1001 aa17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 KLHDC9Q8NEP7 349 aa17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 FAM227BQ96M60 508 aa17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 LBHD1Q9BQE6 289 aaPredicted RBP17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 LNPKQ9C0E8 428 aa17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 RNF41Q9H4P4 317 aaPredicted RBP17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 RAVER2Q9HCJ3 691 aaKnown RBP17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 PRKAG2Q9UGJ0 569 aa17.13■□□□□ 0.33
SMARCE1-213ENST00000578044 LAMA4Q16363 1823 aa17.12■□□□□ 0.33
SMARCE1-213ENST00000578044 RANBP6O60518 1105 aaKnown RBP17.12■□□□□ 0.33
SMARCE1-213ENST00000578044 SYN1P17600 705 aa17.12■□□□□ 0.33
SMARCE1-213ENST00000578044 MCCP23508 829 aa17.12■□□□□ 0.33
SMARCE1-213ENST00000578044 CTDSPL2Q05D32 466 aa17.12■□□□□ 0.33
SMARCE1-213ENST00000578044 CCDC178Q5BJE1 867 aa17.12■□□□□ 0.33
SMARCE1-213ENST00000578044 CCSAPQ6IQ19 270 aaPredicted RBP17.12■□□□□ 0.33
SMARCE1-213ENST00000578044 FGD4Q96M96 766 aa17.12■□□□□ 0.33
SMARCE1-213ENST00000578044 UPF3AQ9H1J1 476 aaKnown RBP17.12■□□□□ 0.33
SMARCE1-213ENST00000578044 ASB14A6NK59 587 aa17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 SDSP20132 328 aa17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 ADCYAP1R1P41586 468 aa17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 ACVR2BQ13705 512 aa17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 AKNAD1Q5T1N1 836 aa17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 FAM109BQ6ICB4 259 aaPredicted RBP17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 ANKRD33Q7Z3H0 272 aa17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 NUP133Q8WUM0 1156 aa17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 SEZ6LQ9BYH1 1024 aa17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 PRR12Q9ULL5 1215 aa17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 ELP1O95163 1332 aa17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 A0A0C4DFX4 3053 aa17.11■□□□□ 0.33
SMARCE1-213ENST00000578044 SOX1O00570 391 aaPredicted RBP17.1■□□□□ 0.33
SMARCE1-213ENST00000578044 ICAM1P05362 532 aa17.1■□□□□ 0.33
SMARCE1-213ENST00000578044 SNHG28P0DPA3 235 aa17.1■□□□□ 0.33
SMARCE1-213ENST00000578044 TAL1P17542 331 aaPredicted RBP17.1■□□□□ 0.33
SMARCE1-213ENST00000578044 GJA9P57773 515 aa17.1■□□□□ 0.33
SMARCE1-213ENST00000578044 NMIQ13287 307 aaPredicted RBP17.1■□□□□ 0.33
SMARCE1-213ENST00000578044 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
SMARCE1-213ENST00000578044 PCSK9Q8NBP7 692 aaKnown RBP17.1■□□□□ 0.33
SMARCE1-213ENST00000578044 MORC4Q8TE76 937 aa17.1■□□□□ 0.33
SMARCE1-213ENST00000578044 KATNBL1Q9H079 304 aa17.1■□□□□ 0.33
SMARCE1-213ENST00000578044 RANBP17Q9H2T7 1088 aaKnown RBP17.1■□□□□ 0.33
SMARCE1-213ENST00000578044 A1CFQ9NQ94 594 aaKnown RBP17.1■□□□□ 0.33
SMARCE1-213ENST00000578044 TRIM6-TRIM34B2RNG4 842 aa17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 POTEB2H3BUK9 544 aa17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 ATN1P54259 1190 aaPredicted RBP17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 MFSD6Q6ZSS7 791 aa17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 ARMCX2Q7L311 632 aa17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 DGKHQ86XP1 1220 aa17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 ANKS1AQ92625 1134 aa17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 DSCC1Q9BVC3 393 aa17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 SPC25Q9HBM1 224 aa17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 RNF146Q9NTX7 359 aa17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 Q9Y3F1 56 aa17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 MROH7Q68CQ1 1323 aa17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 SYNRGQ9UMZ2 1314 aa17.09■□□□□ 0.33
SMARCE1-213ENST00000578044 WDR19Q8NEZ3 1342 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 A0A1W2PQ45 241 aaPredicted RBP17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 A0A1W2PQY0 241 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 KIAA0355O15063 1070 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 NMT2O60551 498 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 PGK1P00558 417 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 IGHDP01880 384 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 ACLYP53396 1101 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 IKQ13123 557 aaPredicted RBP17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 GPATCH4Q5T3I0 446 aaKnown RBP17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 ANO1Q5XXA6 986 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 CCDC144CPQ8IYA2 1237 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 ESR2Q92731 530 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 TRERF1Q96PN7 1200 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 TMEM47Q9BQJ4 181 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 PDLIM7Q9NR12 457 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 ATP11BQ9Y2G3 1177 aa17.08■□□□□ 0.32
SMARCE1-213ENST00000578044 PDHBP11177 359 aa17.07■□□□□ 0.32
SMARCE1-213ENST00000578044 CCDC144BQ3MJ40 725 aa17.07■□□□□ 0.32
SMARCE1-213ENST00000578044 TRIM60Q495X7 471 aa17.07■□□□□ 0.32
SMARCE1-213ENST00000578044 KCTD1Q719H9 257 aa17.07■□□□□ 0.32
SMARCE1-213ENST00000578044 RILPL2Q969X0 211 aa17.07■□□□□ 0.32
SMARCE1-213ENST00000578044 LRCH3Q96II8 777 aa17.07■□□□□ 0.32
SMARCE1-213ENST00000578044 AGBL1Q96MI9 1066 aa17.07■□□□□ 0.32
SMARCE1-213ENST00000578044 INCENPQ9NQS7 918 aa17.07■□□□□ 0.32
SMARCE1-213ENST00000578044 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
SMARCE1-213ENST00000578044 CTNNA3Q9UI47 895 aa17.07■□□□□ 0.32
SMARCE1-213ENST00000578044 LCTP09848 1927 aa17.06■□□□□ 0.32
SMARCE1-213ENST00000578044 ZNF213O14771 459 aa17.06■□□□□ 0.32
SMARCE1-213ENST00000578044 MDM2Q00987 491 aaPredicted RBP17.06■□□□□ 0.32
SMARCE1-213ENST00000578044 TLE2Q04725 743 aa17.06■□□□□ 0.32
SMARCE1-213ENST00000578044 ZNF543Q08ER8 600 aa17.06■□□□□ 0.32
SMARCE1-213ENST00000578044 SYDE2Q5VT97 1194 aa17.06■□□□□ 0.32
SMARCE1-213ENST00000578044 IQSEC1Q6DN90 963 aa17.06■□□□□ 0.32
SMARCE1-213ENST00000578044 RGS22Q8NE09 1264 aa17.06■□□□□ 0.32
SMARCE1-213ENST00000578044 DIAPH3Q9NSV4 1193 aa17.06■□□□□ 0.32
SMARCE1-213ENST00000578044 ADD3Q9UEY8 706 aaKnown RBP17.06■□□□□ 0.32
SMARCE1-213ENST00000578044 LRRC37A2A6NM11 1700 aa17.05■□□□□ 0.32
SMARCE1-213ENST00000578044 CABYRO75952 493 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms