RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 TEX13BQ9BXU2 312 aa17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 CRNKL1Q9BZJ0 848 aaKnown RBP17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 TRPV6Q9H1D0 765 aa17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 SWAP70Q9UH65 585 aa17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 DBNLQ9UJU6 430 aaKnown RBP17.08■□□□□ 0.32
PPP4R1-206ENST00000577779 RAD21O60216 631 aa17.07■□□□□ 0.32
PPP4R1-206ENST00000577779 CABYRO75952 493 aa17.07■□□□□ 0.32
PPP4R1-206ENST00000577779 CYP2D6P10635 497 aa17.07■□□□□ 0.32
PPP4R1-206ENST00000577779 NHLH1Q02575 133 aa17.07■□□□□ 0.32
PPP4R1-206ENST00000577779 ITGA7Q13683 1181 aa17.07■□□□□ 0.32
PPP4R1-206ENST00000577779 TTLL4Q14679 1199 aa17.07■□□□□ 0.32
PPP4R1-206ENST00000577779 DYNLL2Q96FJ2 89 aa17.07■□□□□ 0.32
PPP4R1-206ENST00000577779 TLR7Q9NYK1 1049 aaKnown RBP17.07■□□□□ 0.32
PPP4R1-206ENST00000577779 CACNA1AO00555 2505 aa17.06■□□□□ 0.32
PPP4R1-206ENST00000577779 SLC4A3P48751 1232 aa17.06■□□□□ 0.32
PPP4R1-206ENST00000577779 FAM83BQ5T0W9 1011 aa17.06■□□□□ 0.32
PPP4R1-206ENST00000577779 NOL8Q76FK4 1167 aaKnown RBP17.06■□□□□ 0.32
PPP4R1-206ENST00000577779 VWCEQ96DN2 955 aa17.06■□□□□ 0.32
PPP4R1-206ENST00000577779 ANTXR1Q9H6X2 564 aa17.06■□□□□ 0.32
PPP4R1-206ENST00000577779 GOPCQ9HD26 462 aa17.06■□□□□ 0.32
PPP4R1-206ENST00000577779 B4GALT4O60513 344 aa17.05■□□□□ 0.32
PPP4R1-206ENST00000577779 PFKMP08237 780 aa17.05■□□□□ 0.32
PPP4R1-206ENST00000577779 EEF2P13639 858 aaKnown RBP17.05■□□□□ 0.32
PPP4R1-206ENST00000577779 NKX3-2P78367 333 aa17.05■□□□□ 0.32
PPP4R1-206ENST00000577779 TAP1Q03518 808 aa17.05■□□□□ 0.32
PPP4R1-206ENST00000577779 GRB10Q13322 594 aa17.05■□□□□ 0.32
PPP4R1-206ENST00000577779 CSPP1Q1MSJ5 1256 aa17.05■□□□□ 0.32
PPP4R1-206ENST00000577779 ARMCX2Q7L311 632 aa17.05■□□□□ 0.32
PPP4R1-206ENST00000577779 SEZ6LQ9BYH1 1024 aa17.05■□□□□ 0.32
PPP4R1-206ENST00000577779 CCDC8Q9H0W5 538 aaPredicted RBP17.05■□□□□ 0.32
PPP4R1-206ENST00000577779 RIPK3Q9Y572 518 aa17.05■□□□□ 0.32
PPP4R1-206ENST00000577779 GRIN2DO15399 1336 aa17.04■□□□□ 0.32
PPP4R1-206ENST00000577779 ANP32CO43423 234 aa17.04■□□□□ 0.32
PPP4R1-206ENST00000577779 TNFAIP2Q03169 654 aa17.04■□□□□ 0.32
PPP4R1-206ENST00000577779 DEFB128Q7Z7B8 93 aa17.04■□□□□ 0.32
PPP4R1-206ENST00000577779 GJD3Q8N144 294 aa17.04■□□□□ 0.32
PPP4R1-206ENST00000577779 ANKRD35Q8N283 1001 aa17.04■□□□□ 0.32
PPP4R1-206ENST00000577779 SDR42E1Q8WUS8 393 aa17.04■□□□□ 0.32
PPP4R1-206ENST00000577779 AGBL1Q96MI9 1066 aa17.04■□□□□ 0.32
PPP4R1-206ENST00000577779 SLC9A7Q96T83 725 aa17.04■□□□□ 0.32
PPP4R1-206ENST00000577779 SLF1Q9BQI6 1058 aa17.04■□□□□ 0.32
PPP4R1-206ENST00000577779 DCP1AQ9NPI6 582 aaPredicted RBP17.04■□□□□ 0.32
PPP4R1-206ENST00000577779 ARHGEF15O94989 841 aa17.03■□□□□ 0.32
PPP4R1-206ENST00000577779 ACTN1P12814 892 aa17.03■□□□□ 0.32
PPP4R1-206ENST00000577779 ALADP13716 330 aa17.03■□□□□ 0.32
PPP4R1-206ENST00000577779 SSTR3P32745 418 aaPredicted RBP17.03■□□□□ 0.32
PPP4R1-206ENST00000577779 FSCN1Q16658 493 aaKnown RBP17.03■□□□□ 0.32
PPP4R1-206ENST00000577779 CCDC144CPQ8IYA2 1237 aa17.03■□□□□ 0.32
PPP4R1-206ENST00000577779 CCDC17Q96LX7 622 aa17.03■□□□□ 0.32
PPP4R1-206ENST00000577779 FGD4Q96M96 766 aa17.03■□□□□ 0.32
PPP4R1-206ENST00000577779 ASTN1O14525 1302 aa17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 COL4A4P53420 1690 aaPredicted RBP17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 KIF28PB7ZC32 967 aa17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 ZEB2O60315 1214 aa17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 SURF6O75683 361 aaKnown RBP17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 CT47B1P0C2W7 299 aaPredicted RBP17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 TLK2Q86UE8 772 aa17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 FAM178BQ8IXR5 827 aa17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 FBXL18Q96ME1 805 aa17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 KATNBL1Q9H079 304 aa17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 AP5M1Q9H0R1 490 aa17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 KANSL2Q9H9L4 492 aa17.02■□□□□ 0.32
PPP4R1-206ENST00000577779 SCN5AQ14524 2016 aa17.01■□□□□ 0.31
PPP4R1-206ENST00000577779 LPXNO60711 386 aa17.01■□□□□ 0.31
PPP4R1-206ENST00000577779 PSMC6P62333 389 aa17.01■□□□□ 0.31
PPP4R1-206ENST00000577779 POLA2Q14181 598 aa17.01■□□□□ 0.31
PPP4R1-206ENST00000577779 SLC9C2Q5TAH2 1124 aa17.01■□□□□ 0.31
PPP4R1-206ENST00000577779 HERC6Q8IVU3 1022 aa17.01■□□□□ 0.31
PPP4R1-206ENST00000577779 CPXCR1Q8N123 301 aa17.01■□□□□ 0.31
PPP4R1-206ENST00000577779 PHOSPHO2Q8TCD6 241 aa17.01■□□□□ 0.31
PPP4R1-206ENST00000577779 ARHGAP45Q92619 1136 aa17.01■□□□□ 0.31
PPP4R1-206ENST00000577779 NUP88Q99567 741 aaPredicted RBP17.01■□□□□ 0.31
PPP4R1-206ENST00000577779 KCNH6Q9H252 994 aa17.01■□□□□ 0.31
PPP4R1-206ENST00000577779 CTDP1Q9Y5B0 961 aaPredicted RBP17.01■□□□□ 0.31
PPP4R1-206ENST00000577779 ZBED4O75132 1171 aa17■□□□□ 0.31
PPP4R1-206ENST00000577779 PDE6AP16499 860 aa17■□□□□ 0.31
PPP4R1-206ENST00000577779 CDK8P49336 464 aa17■□□□□ 0.31
PPP4R1-206ENST00000577779 LCORLQ8N3X6 602 aa17■□□□□ 0.31
PPP4R1-206ENST00000577779 EAF2Q96CJ1 260 aaPredicted RBP17■□□□□ 0.31
PPP4R1-206ENST00000577779 ALDH8A1Q9H2A2 487 aaPredicted RBP17■□□□□ 0.31
PPP4R1-206ENST00000577779 UBE2ZQ9H832 354 aaPredicted RBP17■□□□□ 0.31
PPP4R1-206ENST00000577779 GNEQ9Y223 722 aaKnown RBP17■□□□□ 0.31
PPP4R1-206ENST00000577779 C5orf42Q9H799 3197 aa17■□□□□ 0.31
PPP4R1-206ENST00000577779 ZDBF2Q9HCK1 2354 aa17■□□□□ 0.31
PPP4R1-206ENST00000577779 SPTBN4Q9H254 2564 aa16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 ATP2A1O14983 1001 aa16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 DYNC1LI2O43237 492 aaPredicted RBP16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 SUPT20HL2P0C7V6 817 aa16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 CYP2C9P11712 490 aa16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 SPRED2Q7Z698 418 aa16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 PRPF38AQ8NAV1 312 aaKnown RBP16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 RAVER2Q9HCJ3 691 aaKnown RBP16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 TRMT13Q9NUP7 481 aaKnown RBP16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 LMCD1Q9NZU5 365 aa16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 FBXO40Q9UH90 709 aa16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 BAZ2AQ9UIF9 1905 aaKnown RBP16.99■□□□□ 0.31
PPP4R1-206ENST00000577779 ZNF532Q9HCE3 1301 aa16.98■□□□□ 0.31
PPP4R1-206ENST00000577779 ZNF318Q5VUA4 2279 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms