RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 KAT14Q9H8E8 782 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 TCP11L1Q9NUJ3 509 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.71□□□□□ -0.53
CRLF3-202ENST00000577725 THEGQ9P2T0 379 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 STX8Q9UNK0 236 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 ZDHHC9Q9Y397 364 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 SNCAIPQ9Y6H5 919 aa11.71□□□□□ -0.53
CRLF3-202ENST00000577725 CACNA1AO00555 2505 aa11.7□□□□□ -0.54
CRLF3-202ENST00000577725 PIEZO1Q92508 2521 aa11.7□□□□□ -0.54
CRLF3-202ENST00000577725 CPLX1O14810 134 aa11.7□□□□□ -0.54
CRLF3-202ENST00000577725 PLEKHA8P1O95397 391 aa11.7□□□□□ -0.54
CRLF3-202ENST00000577725 MRPS5P82675 430 aaKnown RBP11.7□□□□□ -0.54
CRLF3-202ENST00000577725 SEPT2Q15019 361 aa11.7□□□□□ -0.54
CRLF3-202ENST00000577725 TATDN1Q6P1N9 297 aa11.7□□□□□ -0.54
CRLF3-202ENST00000577725 METTL16Q86W50 562 aaKnown RBP11.7□□□□□ -0.54
CRLF3-202ENST00000577725 HOMEZQ8IX15 550 aa11.7□□□□□ -0.54
CRLF3-202ENST00000577725 TMTC2Q8N394 836 aa11.7□□□□□ -0.54
CRLF3-202ENST00000577725 SMARCC2Q8TAQ2 1214 aa11.7□□□□□ -0.54
CRLF3-202ENST00000577725 ANKS1AQ92625 1134 aa11.7□□□□□ -0.54
CRLF3-202ENST00000577725 PHKBQ93100 1093 aa11.7□□□□□ -0.54
CRLF3-202ENST00000577725 TEPSINQ96N21 525 aa11.7□□□□□ -0.54
CRLF3-202ENST00000577725 PARK7Q99497 189 aaKnown RBP11.7□□□□□ -0.54
CRLF3-202ENST00000577725 BAZ2BQ9UIF8 2168 aaKnown RBP11.69□□□□□ -0.54
CRLF3-202ENST00000577725 NID2Q14112 1375 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 MYH6P13533 1939 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 TNPO2O14787 897 aaKnown RBP11.69□□□□□ -0.54
CRLF3-202ENST00000577725 DDAH1O94760 285 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 GH2P01242 217 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 FDPSP14324 419 aaKnown RBP11.69□□□□□ -0.54
CRLF3-202ENST00000577725 GUCY1A2P33402 732 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 RAB3GAP1Q15042 981 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 TMEM132AQ24JP5 1023 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 ABCB5Q2M3G0 1257 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 CCDC178Q5BJE1 867 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 DGKHQ86XP1 1220 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 CCDC82Q8N4S0 544 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 FANCBQ8NB91 859 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 PNMA1Q8ND90 353 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 CHAMP1Q96JM3 812 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 AIFM3Q96NN9 605 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 LLPHQ9BRT6 129 aaKnown RBP11.69□□□□□ -0.54
CRLF3-202ENST00000577725 SLC26A6Q9BXS9 759 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 MTMR4Q9NYA4 1195 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 CLIP2Q9UDT6 1046 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 OGDHLQ9ULD0 1010 aa11.69□□□□□ -0.54
CRLF3-202ENST00000577725 ATAD5Q96QE3 1844 aa11.68□□□□□ -0.54
CRLF3-202ENST00000577725 hCG_1642624A0A1W2PR95 340 aa11.68□□□□□ -0.54
CRLF3-202ENST00000577725 VPS37CA5D8V6 355 aaPredicted RBP11.68□□□□□ -0.54
CRLF3-202ENST00000577725 TOP1P11387 765 aaKnown RBP11.68□□□□□ -0.54
CRLF3-202ENST00000577725 SYT1P21579 422 aa11.68□□□□□ -0.54
CRLF3-202ENST00000577725 NT5C2P49902 561 aa11.68□□□□□ -0.54
CRLF3-202ENST00000577725 MRE11P49959 708 aa11.68□□□□□ -0.54
CRLF3-202ENST00000577725 GUCY1B3Q02153 619 aa11.68□□□□□ -0.54
CRLF3-202ENST00000577725 TROAPQ12815 778 aa11.68□□□□□ -0.54
CRLF3-202ENST00000577725 GRM4Q14833 912 aa11.68□□□□□ -0.54
CRLF3-202ENST00000577725 NTRK3Q16288 839 aa11.68□□□□□ -0.54
CRLF3-202ENST00000577725 LARP1BQ659C4 914 aaKnown RBP11.68□□□□□ -0.54
CRLF3-202ENST00000577725 CCDC84Q86UT8 332 aaPredicted RBP11.68□□□□□ -0.54
CRLF3-202ENST00000577725 FAM184AQ8NB25 1140 aa11.68□□□□□ -0.54
CRLF3-202ENST00000577725 PIBF1Q8WXW3 757 aa11.68□□□□□ -0.54
CRLF3-202ENST00000577725 TNPO1Q92973 898 aaKnown RBP11.68□□□□□ -0.54
CRLF3-202ENST00000577725 CCDC17Q96LX7 622 aa11.68□□□□□ -0.54
CRLF3-202ENST00000577725 HMX1Q9NP08 348 aaPredicted RBP11.68□□□□□ -0.54
CRLF3-202ENST00000577725 ORC3Q9UBD5 711 aaPredicted RBP11.68□□□□□ -0.54
CRLF3-202ENST00000577725 HERC5Q9UII4 1024 aaKnown RBP11.68□□□□□ -0.54
CRLF3-202ENST00000577725 USP17L5A8MUK1 530 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 STX6O43752 255 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 BRD1O95696 1058 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 GOLGA8HP0CJ92 632 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 COL6A1P12109 1028 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 NUCB2P80303 420 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 HMGN5P82970 282 aaKnown RBP11.67□□□□□ -0.54
CRLF3-202ENST00000577725 PPATQ06203 517 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 SSRP1Q08945 709 aaKnown RBP11.67□□□□□ -0.54
CRLF3-202ENST00000577725 SHHQ15465 462 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 LRRC26Q2I0M4 334 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 FOXD4L6Q3SYB3 417 aaPredicted RBP11.67□□□□□ -0.54
CRLF3-202ENST00000577725 TMEM31Q5JXX7 168 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 FOXD4L3Q6VB84 417 aaPredicted RBP11.67□□□□□ -0.54
CRLF3-202ENST00000577725 TMTC3Q6ZXV5 915 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 STAG2Q8N3U4 1231 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 MTMR6Q9Y217 621 aa11.67□□□□□ -0.54
CRLF3-202ENST00000577725 FRMPD2Q68DX3 1309 aaPredicted RBP11.66□□□□□ -0.54
CRLF3-202ENST00000577725 RAD21O60216 631 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 DHX16O60231 1041 aaKnown RBP11.66□□□□□ -0.54
CRLF3-202ENST00000577725 TBC1D12O60347 775 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 TTLL1O95922 423 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 HMGCRP04035 888 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 CALM1P0DP23 149 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 CALM2P0DP24 149 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 CALM3P0DP25 149 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 EEF2P13639 858 aaKnown RBP11.66□□□□□ -0.54
CRLF3-202ENST00000577725 IFNAR1P17181 557 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 NOVP48745 357 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 RCAN1P53805 252 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 ICA1Q05084 483 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 SLC35G1Q2M3R5 365 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 CPLX2Q6PUV4 134 aaKnown RBP11.66□□□□□ -0.54
CRLF3-202ENST00000577725 USP17L2Q6R6M4 530 aa11.66□□□□□ -0.54
CRLF3-202ENST00000577725 TMEM179Q6ZVK1 233 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms