RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 SEZ6LQ9BYH1 1024 aa16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 MTIF3Q9H2K0 278 aaKnown RBP16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 DCTPP1Q9H773 170 aa16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 TTC41PQ6P2S7 1318 aa16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 PLIN4Q96Q06 1357 aa16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 ASB14A6NK59 587 aa16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 FAAP100Q0VG06 881 aa16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 MFSD5Q6N075 450 aa16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 CCDC129Q6ZRS4 1044 aa16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 ARMCX2Q7L311 632 aa16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 IFNL3Q8IZI9 196 aa16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 LRRC47Q8N1G4 583 aaKnown RBP16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 MYLIPQ8WY64 445 aa16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 LENG1Q96BZ8 264 aaPredicted RBP16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 RIPK3Q9Y572 518 aa16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 PLXNA1Q9UIW2 1896 aa16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 GREB1LQ9C091 1923 aaPredicted RBP16.88■□□□□ 0.29
SMARCD2-205ENST00000577686 ZEB2O60315 1214 aa16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 PRDM1O75626 825 aa16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 CABYRO75952 493 aa16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 SLC1A4P43007 532 aa16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 GJA9P57773 515 aa16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 CCDC144BQ3MJ40 725 aa16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 GNASQ5JWF2 1037 aa16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 PSRC1Q6PGN9 363 aaPredicted RBP16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 NOL8Q76FK4 1167 aaKnown RBP16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 GMCL1Q96IK5 515 aa16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 FSD1Q9BTV5 496 aa16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 UPF3AQ9H1J1 476 aaKnown RBP16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 EPB41L4AQ9HCS5 686 aaPredicted RBP16.87■□□□□ 0.29
SMARCD2-205ENST00000577686 TMEM232C9JQI7 657 aa16.86■□□□□ 0.29
SMARCD2-205ENST00000577686 ARVCFO00192 962 aa16.86■□□□□ 0.29
SMARCD2-205ENST00000577686 ASGR1P07306 291 aa16.86■□□□□ 0.29
SMARCD2-205ENST00000577686 DNAJB2P25686 324 aa16.86■□□□□ 0.29
SMARCD2-205ENST00000577686 AP5M1Q9H0R1 490 aa16.86■□□□□ 0.29
SMARCD2-205ENST00000577686 HOMER2Q9NSB8 354 aa16.86■□□□□ 0.29
SMARCD2-205ENST00000577686 RNF146Q9NTX7 359 aa16.86■□□□□ 0.29
SMARCD2-205ENST00000577686 TBX21Q9UL17 535 aa16.86■□□□□ 0.29
SMARCD2-205ENST00000577686 TSPY2A6NKD2 308 aa16.85■□□□□ 0.29
SMARCD2-205ENST00000577686 M0R2C6 588 aa16.85■□□□□ 0.29
SMARCD2-205ENST00000577686 TFAP4Q01664 338 aa16.85■□□□□ 0.29
SMARCD2-205ENST00000577686 PPARAQ07869 468 aa16.85■□□□□ 0.29
SMARCD2-205ENST00000577686 CCSAPQ6IQ19 270 aaPredicted RBP16.85■□□□□ 0.29
SMARCD2-205ENST00000577686 CCDC144CPQ8IYA2 1237 aa16.85■□□□□ 0.29
SMARCD2-205ENST00000577686 STAG1Q8WVM7 1258 aa16.85■□□□□ 0.29
SMARCD2-205ENST00000577686 TTYH1Q9H313 450 aaPredicted RBP16.85■□□□□ 0.29
SMARCD2-205ENST00000577686 ZNFX1Q9P2E3 1918 aaKnown RBP16.85■□□□□ 0.29
SMARCD2-205ENST00000577686 PLA2G6O60733 806 aa16.84■□□□□ 0.29
SMARCD2-205ENST00000577686 ITGB8P26012 769 aa16.84■□□□□ 0.29
SMARCD2-205ENST00000577686 TNFAIP2Q03169 654 aa16.84■□□□□ 0.29
SMARCD2-205ENST00000577686 TIFAQ96CG3 184 aa16.84■□□□□ 0.29
SMARCD2-205ENST00000577686 GAS2L1Q99501 681 aaPredicted RBP16.84■□□□□ 0.29
SMARCD2-205ENST00000577686 STX8Q9UNK0 236 aa16.84■□□□□ 0.29
SMARCD2-205ENST00000577686 COL6A3P12111 3177 aa16.83■□□□□ 0.28
SMARCD2-205ENST00000577686 CDK7P50613 346 aa16.83■□□□□ 0.28
SMARCD2-205ENST00000577686 EPHB4P54760 987 aa16.83■□□□□ 0.28
SMARCD2-205ENST00000577686 C20orf194Q5TEA3 1177 aa16.83■□□□□ 0.28
SMARCD2-205ENST00000577686 TSHZ3Q63HK5 1081 aa16.83■□□□□ 0.28
SMARCD2-205ENST00000577686 CUL9Q8IWT3 2517 aa16.83■□□□□ 0.28
SMARCD2-205ENST00000577686 PNMA2Q9UL42 364 aa16.83■□□□□ 0.28
SMARCD2-205ENST00000577686 MYADML2A6NDP7 307 aa16.82■□□□□ 0.28
SMARCD2-205ENST00000577686 ALAS1P13196 640 aa16.82■□□□□ 0.28
SMARCD2-205ENST00000577686 NKX3-2P78367 333 aa16.82■□□□□ 0.28
SMARCD2-205ENST00000577686 RAB30Q15771 203 aa16.82■□□□□ 0.28
SMARCD2-205ENST00000577686 FAM133AQ8N9E0 248 aa16.82■□□□□ 0.28
SMARCD2-205ENST00000577686 TRERF1Q96PN7 1200 aa16.82■□□□□ 0.28
SMARCD2-205ENST00000577686 MPHOSPH6Q99547 160 aaKnown RBP16.82■□□□□ 0.28
SMARCD2-205ENST00000577686 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.82■□□□□ 0.288e-10■■□□□ 14.1
SMARCD2-205ENST00000577686 ZNF576Q9H609 170 aa16.82■□□□□ 0.28
SMARCD2-205ENST00000577686 A1CFQ9NQ94 594 aaKnown RBP16.82■□□□□ 0.28
SMARCD2-205ENST00000577686 MSRAQ9UJ68 235 aa16.82■□□□□ 0.28
SMARCD2-205ENST00000577686 MX1P20591 662 aa16.81■□□□□ 0.28
SMARCD2-205ENST00000577686 FSCN1Q16658 493 aaKnown RBP16.81■□□□□ 0.28
SMARCD2-205ENST00000577686 CCDC96Q2M329 555 aa16.81■□□□□ 0.28
SMARCD2-205ENST00000577686 ZMYM1Q5SVZ6 1142 aa16.81■□□□□ 0.28
SMARCD2-205ENST00000577686 RCSD1Q6JBY9 416 aa16.81■□□□□ 0.28
SMARCD2-205ENST00000577686 TLK2Q86UE8 772 aa16.81■□□□□ 0.28
SMARCD2-205ENST00000577686 FAM126BQ8IXS8 530 aa16.81■□□□□ 0.28
SMARCD2-205ENST00000577686 FGD4Q96M96 766 aa16.81■□□□□ 0.28
SMARCD2-205ENST00000577686 PPP1R12CQ9BZL4 782 aa16.81■□□□□ 0.28
SMARCD2-205ENST00000577686 VTA1Q9NP79 307 aa16.81■□□□□ 0.28
SMARCD2-205ENST00000577686 ADD3Q9UEY8 706 aaKnown RBP16.81■□□□□ 0.28
SMARCD2-205ENST00000577686 Q9Y3F1 56 aa16.81■□□□□ 0.28
SMARCD2-205ENST00000577686 MYH4Q9Y623 1939 aa16.8■□□□□ 0.28
SMARCD2-205ENST00000577686 LOC102724159A0A0B4J2E5 919 aa16.8■□□□□ 0.28
SMARCD2-205ENST00000577686 MCCP23508 829 aa16.8■□□□□ 0.28
SMARCD2-205ENST00000577686 CNTN2Q02246 1040 aa16.8■□□□□ 0.28
SMARCD2-205ENST00000577686 PWP2Q15269 919 aaKnown RBP16.8■□□□□ 0.28
SMARCD2-205ENST00000577686 IQSEC1Q6DN90 963 aa16.8■□□□□ 0.28
SMARCD2-205ENST00000577686 DCAF4Q8WV16 495 aa16.8■□□□□ 0.28
SMARCD2-205ENST00000577686 HIPK3Q9H422 1215 aa16.8■□□□□ 0.28
SMARCD2-205ENST00000577686 IL23AQ9NPF7 189 aa16.8■□□□□ 0.28
SMARCD2-205ENST00000577686 CCPG1Q9ULG6 757 aa16.8■□□□□ 0.28
SMARCD2-205ENST00000577686 SMCHD1A6NHR9 2005 aa16.79■□□□□ 0.28
SMARCD2-205ENST00000577686 RANBP6O60518 1105 aaKnown RBP16.79■□□□□ 0.28
SMARCD2-205ENST00000577686 CSF2RAP15509 400 aa16.79■□□□□ 0.28
SMARCD2-205ENST00000577686 ITGA7Q13683 1181 aa16.79■□□□□ 0.28
SMARCD2-205ENST00000577686 BRDTQ58F21 947 aaPredicted RBP16.79■□□□□ 0.28
SMARCD2-205ENST00000577686 TMEM240Q5SV17 173 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms