RNA–Protein interactions for RNA: ENST00000577589.1

CUEDC1-205, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-205ENST00000577589 ZNF467Q7Z7K2 595 aaPredicted RBP15.24■□□□□ 0.03
CUEDC1-205ENST00000577589 VTI1AQ96AJ9 217 aa15.24■□□□□ 0.03
CUEDC1-205ENST00000577589 DYNLL2Q96FJ2 89 aa15.24■□□□□ 0.03
CUEDC1-205ENST00000577589 API5Q9BZZ5 524 aaKnown RBP15.24■□□□□ 0.03
CUEDC1-205ENST00000577589 ZBBXA8MT70 800 aa15.23■□□□□ 0.03
CUEDC1-205ENST00000577589 POLR3DP05423 398 aaPredicted RBP15.23■□□□□ 0.03
CUEDC1-205ENST00000577589 GNAI3P08754 354 aa15.23■□□□□ 0.03
CUEDC1-205ENST00000577589 TMEM67Q5HYA8 995 aa15.23■□□□□ 0.03
CUEDC1-205ENST00000577589 CCDC158Q5M9N0 1113 aa15.23■□□□□ 0.03
CUEDC1-205ENST00000577589 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.23■□□□□ 0.03
CUEDC1-205ENST00000577589 ARNTL2Q8WYA1 636 aa15.23■□□□□ 0.03
CUEDC1-205ENST00000577589 ANKS1AQ92625 1134 aa15.23■□□□□ 0.03
CUEDC1-205ENST00000577589 POLA2Q14181 598 aa15.22■□□□□ 0.03
CUEDC1-205ENST00000577589 ARMCX2Q7L311 632 aa15.22■□□□□ 0.03
CUEDC1-205ENST00000577589 FBXL18Q96ME1 805 aa15.22■□□□□ 0.03
CUEDC1-205ENST00000577589 ARHGEF10LQ9HCE6 1279 aa15.22■□□□□ 0.03
CUEDC1-205ENST00000577589 DCP1AQ9NPI6 582 aaPredicted RBP15.22■□□□□ 0.03
CUEDC1-205ENST00000577589 MCM9Q9NXL9 1143 aa15.22■□□□□ 0.03
CUEDC1-205ENST00000577589 TNNQ9UQP3 1299 aa15.22■□□□□ 0.03
CUEDC1-205ENST00000577589 MYO15AQ9UKN7 3530 aa15.22■□□□□ 0.03
CUEDC1-205ENST00000577589 ZFHX2Q9C0A1 2572 aaPredicted RBP15.21■□□□□ 0.03
CUEDC1-205ENST00000577589 DCHS1Q96JQ0 3298 aa15.21■□□□□ 0.03
CUEDC1-205ENST00000577589 COPB2P35606 906 aa15.21■□□□□ 0.03
CUEDC1-205ENST00000577589 ITGA7Q13683 1181 aa15.21■□□□□ 0.03
CUEDC1-205ENST00000577589 FAM83BQ5T0W9 1011 aa15.21■□□□□ 0.03
CUEDC1-205ENST00000577589 FAM178BQ8IXR5 827 aa15.21■□□□□ 0.03
CUEDC1-205ENST00000577589 FAM9BQ8IZU0 186 aa15.21■□□□□ 0.03
CUEDC1-205ENST00000577589 SDR42E1Q8WUS8 393 aa15.21■□□□□ 0.03
CUEDC1-205ENST00000577589 ABHD16BQ9H3Z7 469 aa15.21■□□□□ 0.03
CUEDC1-205ENST00000577589 GNEQ9Y223 722 aaKnown RBP15.21■□□□□ 0.03
CUEDC1-205ENST00000577589 SIP14410 1827 aa15.21■□□□□ 0.03
CUEDC1-205ENST00000577589 VPS13AQ96RL7 3174 aa15.21■□□□□ 0.03
CUEDC1-205ENST00000577589 EEF2P13639 858 aaKnown RBP15.2■□□□□ 0.02
CUEDC1-205ENST00000577589 PSMC6P62333 389 aa15.2■□□□□ 0.02
CUEDC1-205ENST00000577589 SNRNP48Q6IEG0 339 aaKnown RBP15.2■□□□□ 0.02
CUEDC1-205ENST00000577589 TRMT2AQ8IZ69 625 aaKnown RBP15.2■□□□□ 0.02
CUEDC1-205ENST00000577589 EAF2Q96CJ1 260 aaPredicted RBP15.2■□□□□ 0.02
CUEDC1-205ENST00000577589 PHOX2BQ99453 314 aa15.2■□□□□ 0.02
CUEDC1-205ENST00000577589 NUP88Q99567 741 aaPredicted RBP15.2■□□□□ 0.02
CUEDC1-205ENST00000577589 TEX13BQ9BXU2 312 aa15.2■□□□□ 0.02
CUEDC1-205ENST00000577589 SH2D4AQ9H788 454 aa15.2■□□□□ 0.02
CUEDC1-205ENST00000577589 SPC25Q9HBM1 224 aa15.2■□□□□ 0.02
CUEDC1-205ENST00000577589 DDX49Q9Y6V7 483 aaKnown RBP15.2■□□□□ 0.02
CUEDC1-205ENST00000577589 SCN10AQ9Y5Y9 1956 aa15.2■□□□□ 0.02
CUEDC1-205ENST00000577589 CACNA1HO95180 2353 aa15.19■□□□□ 0.02
CUEDC1-205ENST00000577589 CYP2D7A0A087X1C5 515 aa15.19■□□□□ 0.02
CUEDC1-205ENST00000577589 MAGEB6P1A0A0J9YX57 407 aa15.19■□□□□ 0.02
CUEDC1-205ENST00000577589 LCHNA4D1U4 455 aa15.19■□□□□ 0.02
CUEDC1-205ENST00000577589 RBAK-RBAKDNI3L0D1 243 aa15.19■□□□□ 0.02
CUEDC1-205ENST00000577589 TMEM63BQ5T3F8 832 aa15.19■□□□□ 0.02
CUEDC1-205ENST00000577589 CCDC144CPQ8IYA2 1237 aa15.19■□□□□ 0.02
CUEDC1-205ENST00000577589 LCORLQ8N3X6 602 aa15.19■□□□□ 0.02
CUEDC1-205ENST00000577589 GDPD5Q8WTR4 605 aa15.19■□□□□ 0.02
CUEDC1-205ENST00000577589 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.19■□□□□ 0.02
CUEDC1-205ENST00000577589 CCDC8Q9H0W5 538 aaPredicted RBP15.19■□□□□ 0.02
CUEDC1-205ENST00000577589 MYH4Q9Y623 1939 aa15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 TCRBV5S4A2TA0A5A2 114 aa15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 GNAI2P04899 355 aa15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 PDE6AP16499 860 aa15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 FSCN1Q16658 493 aaKnown RBP15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 RPUSD2Q8IZ73 545 aaKnown RBP15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 GJD3Q8N144 294 aa15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 DDX11Q96FC9 970 aa15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 ALDH8A1Q9H2A2 487 aaPredicted RBP15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 TRMT13Q9NUP7 481 aaKnown RBP15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 SWAP70Q9UH65 585 aa15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 TECTAO75443 2155 aa15.18■□□□□ 0.02
CUEDC1-205ENST00000577589 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 ATP2A1O14983 1001 aa15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 CYP2C9P11712 490 aa15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 IL9P15248 144 aa15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 CNTN2Q02246 1040 aa15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 DEFB128Q7Z7B8 93 aa15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 TLK2Q86UE8 772 aa15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 HERC6Q8IVU3 1022 aa15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 SSH3Q8TE77 659 aa15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 UIMC1Q96RL1 719 aa15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 SLC9A7Q96T83 725 aa15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 SLF1Q9BQI6 1058 aa15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 CRNKL1Q9BZJ0 848 aaKnown RBP15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 UBE2ZQ9H832 354 aaPredicted RBP15.17■□□□□ 0.02
CUEDC1-205ENST00000577589 DMDP11532 3685 aa15.16■□□□□ 0.02
CUEDC1-205ENST00000577589 ATG2AQ2TAZ0 1938 aa15.16■□□□□ 0.02
CUEDC1-205ENST00000577589 CABYRO75952 493 aa15.16■□□□□ 0.02
CUEDC1-205ENST00000577589 PFKMP08237 780 aa15.16■□□□□ 0.02
CUEDC1-205ENST00000577589 TNFAIP2Q03169 654 aa15.16■□□□□ 0.02
CUEDC1-205ENST00000577589 LEXMQ3ZCV2 418 aa15.16■□□□□ 0.02
CUEDC1-205ENST00000577589 TMED8Q6PL24 325 aaPredicted RBP15.16■□□□□ 0.02
CUEDC1-205ENST00000577589 FAM133AQ8N9E0 248 aa15.16■□□□□ 0.02
CUEDC1-205ENST00000577589 TRIP12Q14669 1992 aaPredicted RBP15.16■□□□□ 0.02
CUEDC1-205ENST00000577589 POTEB3A0JP26 581 aa15.15■□□□□ 0.02
CUEDC1-205ENST00000577589 PRKAB2O43741 272 aa15.15■□□□□ 0.02
CUEDC1-205ENST00000577589 SMPD1P17405 629 aa15.15■□□□□ 0.02
CUEDC1-205ENST00000577589 CDK8P49336 464 aa15.15■□□□□ 0.02
CUEDC1-205ENST00000577589 SLFNL1Q499Z3 407 aa15.15■□□□□ 0.02
CUEDC1-205ENST00000577589 POTEBQ6S5H4 581 aa15.15■□□□□ 0.02
CUEDC1-205ENST00000577589 SOWAHBA6NEL2 793 aa15.14■□□□□ 0.01
CUEDC1-205ENST00000577589 RARSP54136 660 aaKnown RBP15.14■□□□□ 0.01
CUEDC1-205ENST00000577589 C16orf86Q6ZW13 317 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms