RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 ANKLE1Q8NAG6 615 aa16.38■□□□□ 0.21
GGA3-203ENST00000577435 NCOA7Q8NI08 942 aa16.38■□□□□ 0.21
GGA3-203ENST00000577435 OGDHLQ9ULD0 1010 aa16.38■□□□□ 0.21
GGA3-203ENST00000577435 CDC45O75419 566 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 PGK2P07205 417 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 CCND3P30281 292 aaPredicted RBP16.37■□□□□ 0.21
GGA3-203ENST00000577435 CYP2C19P33261 490 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 SLC16A2P36021 539 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 LHX8Q68G74 356 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 CASC1Q6TDU7 716 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 STOX1Q6ZVD7 989 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 MSL3Q8N5Y2 521 aaKnown RBP16.37■□□□□ 0.21
GGA3-203ENST00000577435 DDX11Q96FC9 970 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 AGBL1Q96MI9 1066 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 GPCPD1Q9NPB8 672 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 NRBP1Q9UHY1 535 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 PNMA2Q9UL42 364 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 TAF6LQ9Y6J9 622 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 CEP290O15078 2479 aa16.37■□□□□ 0.21
GGA3-203ENST00000577435 MSCO60682 206 aa16.36■□□□□ 0.21
GGA3-203ENST00000577435 ICAM1P05362 532 aa16.36■□□□□ 0.21
GGA3-203ENST00000577435 CYBAP13498 195 aa16.36■□□□□ 0.21
GGA3-203ENST00000577435 IFIT1BQ5T764 474 aaKnown RBP16.36■□□□□ 0.21
GGA3-203ENST00000577435 MAMDC4Q6UXC1 1216 aa16.36■□□□□ 0.21
GGA3-203ENST00000577435 ZNF467Q7Z7K2 595 aaPredicted RBP16.36■□□□□ 0.21
GGA3-203ENST00000577435 RALYLQ86SE5 291 aaKnown RBP16.36■□□□□ 0.21
GGA3-203ENST00000577435 TINF2Q9BSI4 451 aa16.36■□□□□ 0.21
GGA3-203ENST00000577435 MTA3Q9BTC8 594 aa16.36■□□□□ 0.21
GGA3-203ENST00000577435 ACAD9Q9H845 621 aa16.36■□□□□ 0.21
GGA3-203ENST00000577435 FRMPD2Q68DX3 1309 aaPredicted RBP16.36■□□□□ 0.21
GGA3-203ENST00000577435 SLC27A2O14975 620 aa16.35■□□□□ 0.21
GGA3-203ENST00000577435 FARP2O94887 1054 aaPredicted RBP16.35■□□□□ 0.21
GGA3-203ENST00000577435 SLC4A3P48751 1232 aa16.35■□□□□ 0.21
GGA3-203ENST00000577435 ASPRV1Q53RT3 343 aa16.35■□□□□ 0.21
GGA3-203ENST00000577435 MB21D2Q8IYB1 491 aaPredicted RBP16.35■□□□□ 0.21
GGA3-203ENST00000577435 ANKRD35Q8N283 1001 aa16.35■□□□□ 0.21
GGA3-203ENST00000577435 TRPV1Q8NER1 839 aa16.35■□□□□ 0.21
GGA3-203ENST00000577435 TRERF1Q96PN7 1200 aa16.35■□□□□ 0.21
GGA3-203ENST00000577435 ANO2Q9NQ90 1003 aa16.35■□□□□ 0.21
GGA3-203ENST00000577435 RNF146Q9NTX7 359 aa16.35■□□□□ 0.21
GGA3-203ENST00000577435 IFIT3O14879 490 aaKnown RBP16.34■□□□□ 0.21
GGA3-203ENST00000577435 MNX1P50219 401 aaPredicted RBP16.34■□□□□ 0.21
GGA3-203ENST00000577435 SNAP25P60880 206 aa16.34■□□□□ 0.21
GGA3-203ENST00000577435 CREB3L3Q68CJ9 461 aa16.34■□□□□ 0.21
GGA3-203ENST00000577435 CCDC174Q6PII3 467 aa16.34■□□□□ 0.21
GGA3-203ENST00000577435 IGDCC4Q8TDY8 1250 aa16.34■□□□□ 0.21
GGA3-203ENST00000577435 DDX20Q9UHI6 824 aaKnown RBP16.34■□□□□ 0.21
GGA3-203ENST00000577435 CCPG1Q9ULG6 757 aa16.34■□□□□ 0.21
GGA3-203ENST00000577435 ERICH2A1L162 156 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 SEPT4O43236 478 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 PARP1P09874 1014 aaKnown RBP16.33■□□□□ 0.2
GGA3-203ENST00000577435 GOLGA8HP0CJ92 632 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 ALAS1P13196 640 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 ANTXR2P58335 489 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 SART3Q15020 963 aaKnown RBP16.33■□□□□ 0.2
GGA3-203ENST00000577435 TSGA10IPQ3SY00 556 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 FAM133AQ8N9E0 248 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 UBA5Q9GZZ9 404 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 A1CFQ9NQ94 594 aaKnown RBP16.33■□□□□ 0.2
GGA3-203ENST00000577435 HOMER2Q9NSB8 354 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 PFASO15067 1338 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 SYNGAP1Q96PV0 1343 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 MCM3APO60318 1980 aa16.33■□□□□ 0.2
GGA3-203ENST00000577435 CNGA1P29973 690 aa16.32■□□□□ 0.2
GGA3-203ENST00000577435 WTAPQ15007 396 aa16.32■□□□□ 0.2
GGA3-203ENST00000577435 MUM1L1Q5H9M0 696 aa16.32■□□□□ 0.2
GGA3-203ENST00000577435 RNF20Q5VTR2 975 aa16.32■□□□□ 0.2
GGA3-203ENST00000577435 NECAB2Q7Z6G3 386 aa16.32■□□□□ 0.2
GGA3-203ENST00000577435 PAWRQ96IZ0 340 aaKnown RBP16.32■□□□□ 0.2
GGA3-203ENST00000577435 FGD4Q96M96 766 aa16.32■□□□□ 0.2
GGA3-203ENST00000577435 HTATIP2Q9BUP3 242 aa16.32■□□□□ 0.2
GGA3-203ENST00000577435 MAF1Q9H063 256 aa16.32■□□□□ 0.2
GGA3-203ENST00000577435 BAZ2BQ9UIF8 2168 aaKnown RBP16.32■□□□□ 0.2
GGA3-203ENST00000577435 MYH6P13533 1939 aa16.31■□□□□ 0.2
GGA3-203ENST00000577435 FRMPD3Q5JV73 1810 aa16.31■□□□□ 0.2
GGA3-203ENST00000577435 PALM3A6NDB9 673 aaPredicted RBP16.31■□□□□ 0.2
GGA3-203ENST00000577435 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
GGA3-203ENST00000577435 SNAI1O95863 264 aaPredicted RBP16.31■□□□□ 0.2
GGA3-203ENST00000577435 ZNF865P0CJ78 1059 aaPredicted RBP16.31■□□□□ 0.2
GGA3-203ENST00000577435 MCM5P33992 734 aa16.31■□□□□ 0.2
GGA3-203ENST00000577435 TROAPQ12815 778 aa16.31■□□□□ 0.2
GGA3-203ENST00000577435 PRAMEF19Q5SWL8 479 aa16.31■□□□□ 0.2
GGA3-203ENST00000577435 ADGRF4Q8IZF3 695 aa16.31■□□□□ 0.2
GGA3-203ENST00000577435 TMTC2Q8N394 836 aa16.31■□□□□ 0.2
GGA3-203ENST00000577435 SENP2Q9HC62 589 aa16.31■□□□□ 0.2
GGA3-203ENST00000577435 CYP39A1Q9NYL5 469 aa16.31■□□□□ 0.2
GGA3-203ENST00000577435 TMEM67Q5HYA8 995 aa16.3■□□□□ 0.2
GGA3-203ENST00000577435 PRPF38BQ5VTL8 546 aaKnown RBP16.3■□□□□ 0.2
GGA3-203ENST00000577435 CHST3Q7LGC8 479 aa16.3■□□□□ 0.2
GGA3-203ENST00000577435 STAG2Q8N3U4 1231 aa16.3■□□□□ 0.2
GGA3-203ENST00000577435 RGS22Q8NE09 1264 aa16.3■□□□□ 0.2
GGA3-203ENST00000577435 CLEC4DQ8WXI8 215 aa16.3■□□□□ 0.2
GGA3-203ENST00000577435 TMEM87BQ96K49 555 aa16.3■□□□□ 0.2
GGA3-203ENST00000577435 CPVLQ9H3G5 476 aa16.3■□□□□ 0.2
GGA3-203ENST00000577435 MAD2L2Q9UI95 211 aa16.3■□□□□ 0.2
GGA3-203ENST00000577435 CNPY2Q9Y2B0 182 aa16.3■□□□□ 0.2
GGA3-203ENST00000577435 SOWAHBA6NEL2 793 aa16.29■□□□□ 0.2
GGA3-203ENST00000577435 KLRF2D3W0D1 207 aa16.29■□□□□ 0.2
GGA3-203ENST00000577435 PRC1O43663 620 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms