RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 NUP88Q99567 741 aaPredicted RBP15.98■□□□□ 0.15
COPS3-214ENST00000577246 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
COPS3-214ENST00000577246 FEM1BQ9UK73 627 aa15.98■□□□□ 0.15
COPS3-214ENST00000577246 RIPK3Q9Y572 518 aa15.98■□□□□ 0.15
COPS3-214ENST00000577246 MUC3AQ02505 3323 aa15.98■□□□□ 0.15
COPS3-214ENST00000577246 MYH8P13535 1937 aa15.98■□□□□ 0.15
COPS3-214ENST00000577246 PLXNA1Q9UIW2 1896 aa15.97■□□□□ 0.15
COPS3-214ENST00000577246 ZEB2O60315 1214 aa15.97■□□□□ 0.15
COPS3-214ENST00000577246 FGBP02675 491 aa15.97■□□□□ 0.15
COPS3-214ENST00000577246 ACRP10323 421 aa15.97■□□□□ 0.15
COPS3-214ENST00000577246 NKX3-2P78367 333 aa15.97■□□□□ 0.15
COPS3-214ENST00000577246 SBK1Q52WX2 424 aa15.97■□□□□ 0.15
COPS3-214ENST00000577246 GIMAP6Q6P9H5 292 aa15.97■□□□□ 0.15
COPS3-214ENST00000577246 NOL8Q76FK4 1167 aaKnown RBP15.97■□□□□ 0.15
COPS3-214ENST00000577246 KIFC2Q96AC6 838 aa15.97■□□□□ 0.15
COPS3-214ENST00000577246 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.97■□□□□ 0.15
COPS3-214ENST00000577246 HIPK3Q9H422 1215 aa15.97■□□□□ 0.15
COPS3-214ENST00000577246 SLC38A10Q9HBR0 1119 aa15.97■□□□□ 0.15
COPS3-214ENST00000577246 COL11A1P12107 1806 aaPredicted RBP15.96■□□□□ 0.15
COPS3-214ENST00000577246 SMIM22K7EJ46 135 aa15.96■□□□□ 0.15
COPS3-214ENST00000577246 CD4P01730 458 aa15.96■□□□□ 0.15
COPS3-214ENST00000577246 RASA1P20936 1047 aa15.96■□□□□ 0.15
COPS3-214ENST00000577246 TNFAIP2Q03169 654 aa15.96■□□□□ 0.15
COPS3-214ENST00000577246 AAK1Q2M2I8 961 aa15.96■□□□□ 0.15
COPS3-214ENST00000577246 SLFNL1Q499Z3 407 aa15.96■□□□□ 0.15
COPS3-214ENST00000577246 CCDC144CPQ8IYA2 1237 aa15.96■□□□□ 0.15
COPS3-214ENST00000577246 CHMP4BQ9H444 224 aaKnown RBP15.96■□□□□ 0.15
COPS3-214ENST00000577246 RAVER2Q9HCJ3 691 aaKnown RBP15.96■□□□□ 0.15
COPS3-214ENST00000577246 CLIP2Q9UDT6 1046 aa15.96■□□□□ 0.15
COPS3-214ENST00000577246 SMCHD1A6NHR9 2005 aa15.95■□□□□ 0.14
COPS3-214ENST00000577246 ASB14A6NK59 587 aa15.95■□□□□ 0.14
COPS3-214ENST00000577246 ADCY6O43306 1168 aa15.95■□□□□ 0.14
COPS3-214ENST00000577246 CYP2C18P33260 490 aa15.95■□□□□ 0.14
COPS3-214ENST00000577246 CCDC85BQ15834 202 aaPredicted RBP15.95■□□□□ 0.14
COPS3-214ENST00000577246 RPUSD2Q8IZ73 545 aaKnown RBP15.95■□□□□ 0.14
COPS3-214ENST00000577246 ZNF444Q8N0Y2 327 aaPredicted RBP15.95■□□□□ 0.14
COPS3-214ENST00000577246 GMCL1P1Q8NEA9 526 aa15.95■□□□□ 0.14
COPS3-214ENST00000577246 PANK1Q8TE04 598 aa15.95■□□□□ 0.14
COPS3-214ENST00000577246 PUS7LQ9H0K6 701 aaKnown RBP15.95■□□□□ 0.14
COPS3-214ENST00000577246 AP5M1Q9H0R1 490 aa15.95■□□□□ 0.14
COPS3-214ENST00000577246 NKX2-4Q9H2Z4 354 aa15.95■□□□□ 0.14
COPS3-214ENST00000577246 ZNFX1Q9P2E3 1918 aaKnown RBP15.95■□□□□ 0.14
COPS3-214ENST00000577246 ADGRE1Q14246 886 aa15.94■□□□□ 0.14
COPS3-214ENST00000577246 TLK2Q86UE8 772 aa15.94■□□□□ 0.14
COPS3-214ENST00000577246 SLC43A3Q8NBI5 491 aa15.94■□□□□ 0.14
COPS3-214ENST00000577246 ACAD9Q9H845 621 aa15.94■□□□□ 0.14
COPS3-214ENST00000577246 CXXC1Q9P0U4 656 aaPredicted RBP15.94■□□□□ 0.14
COPS3-214ENST00000577246 DDX19BQ9UMR2 479 aa15.94■□□□□ 0.14
COPS3-214ENST00000577246 MINDY4BA8MYZ0 360 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 TTLL1O95922 423 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 GNAT2P19087 354 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 IRX5P78411 483 aaPredicted RBP15.93■□□□□ 0.14
COPS3-214ENST00000577246 ITGA7Q13683 1181 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 FSCN1Q16658 493 aaKnown RBP15.93■□□□□ 0.14
COPS3-214ENST00000577246 TKFCQ3LXA3 575 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 PPP2R2DQ66LE6 453 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 CXCL17Q6UXB2 119 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 OTOP2Q7RTS6 562 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 MKL1Q969V6 931 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 FGD4Q96M96 766 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 STRBPQ96SI9 672 aaKnown RBP15.93■□□□□ 0.14
COPS3-214ENST00000577246 C1QTNF1Q9BXJ1 281 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 HOMER2Q9NSB8 354 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 COG6Q9Y2V7 657 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 SLC4A7Q9Y6M7 1214 aa15.93■□□□□ 0.14
COPS3-214ENST00000577246 IGKV6D-41A0A0C4DH26 115 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 CTAGE5O15320 804 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 PFKMP08237 780 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 BMP3P12645 472 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 PLA2G5P39877 138 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 STAT2P52630 851 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 BEX3Q00994 111 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 PPP4R3BQ5MIZ7 849 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 FAM160B2Q86V87 743 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 FAM133AQ8N9E0 248 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 CHURC1Q8WUH1 139 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 FAM122AQ96E09 287 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 KATNBL1Q9H079 304 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 MTMR4Q9NYA4 1195 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 ISY1Q9ULR0 285 aaKnown RBP15.92■□□□□ 0.14
COPS3-214ENST00000577246 Q9Y3F1 56 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 PCDHA11Q9Y5I1 949 aa15.92■□□□□ 0.14
COPS3-214ENST00000577246 BAZ2AQ9UIF9 1905 aaKnown RBP15.92■□□□□ 0.14
COPS3-214ENST00000577246 GSG1L2A8MUP6 293 aa15.91■□□□□ 0.14
COPS3-214ENST00000577246 SUPT20HL2P0C7V6 817 aa15.91■□□□□ 0.14
COPS3-214ENST00000577246 TDO2P48775 406 aa15.91■□□□□ 0.14
COPS3-214ENST00000577246 HNRNPUQ00839 825 aaKnown RBP eCLIP15.91■□□□□ 0.14
COPS3-214ENST00000577246 IKQ13123 557 aaPredicted RBP15.91■□□□□ 0.14
COPS3-214ENST00000577246 STK11IPQ8N1F8 1099 aa15.91■□□□□ 0.14
COPS3-214ENST00000577246 CEP95Q96GE4 821 aa15.91■□□□□ 0.14
COPS3-214ENST00000577246 NOC4LQ9BVI4 516 aaKnown RBP15.91■□□□□ 0.14
COPS3-214ENST00000577246 LRRCC1Q9C099 1032 aa15.91■□□□□ 0.14
COPS3-214ENST00000577246 GNEQ9Y223 722 aaKnown RBP15.91■□□□□ 0.14
COPS3-214ENST00000577246 YBX2Q9Y2T7 364 aaKnown RBP15.91■□□□□ 0.14
COPS3-214ENST00000577246 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.9■□□□□ 0.14
COPS3-214ENST00000577246 ZBBXA8MT70 800 aa15.9■□□□□ 0.14
COPS3-214ENST00000577246 GTPBP6O43824 516 aaPredicted RBP15.9■□□□□ 0.14
COPS3-214ENST00000577246 CHGBP05060 677 aa15.9■□□□□ 0.14
COPS3-214ENST00000577246 SLC3A2P08195 630 aaKnown RBP15.9■□□□□ 0.14
COPS3-214ENST00000577246 CCL23P55773 120 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms