RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 U2AF1L4Q8WU68 220 aaKnown RBP15.89■□□□□ 0.13
CIITA-210ENST00000575513 GPCPD1Q9NPB8 672 aa15.89■□□□□ 0.13
CIITA-210ENST00000575513 BRCA2P51587 3418 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 DNAJC25-GNG10A0A024R161 153 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 PARP1P09874 1014 aaKnown RBP15.88■□□□□ 0.13
CIITA-210ENST00000575513 MCM5P33992 734 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 SLC16A2P36021 539 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 TRIM32Q13049 653 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 ZNF792Q3KQV3 632 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 RASGRP2Q7LDG7 609 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 MAML3Q96JK9 1138 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 MAF1Q9H063 256 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 CRISPLD2Q9H0B8 497 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.88■□□□□ 0.13
CIITA-210ENST00000575513 ACAD9Q9H845 621 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 FLRT1Q9NZU1 646 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 NRBP1Q9UHY1 535 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 ZNF236Q9UL36 1845 aa15.88■□□□□ 0.13
CIITA-210ENST00000575513 FRMPD2Q68DX3 1309 aaPredicted RBP15.88■□□□□ 0.13
CIITA-210ENST00000575513 REC8O95072 547 aa15.87■□□□□ 0.13
CIITA-210ENST00000575513 ANTXR2P58335 489 aa15.87■□□□□ 0.13
CIITA-210ENST00000575513 WTAPQ15007 396 aa15.87■□□□□ 0.13
CIITA-210ENST00000575513 ZNF467Q7Z7K2 595 aaPredicted RBP15.87■□□□□ 0.13
CIITA-210ENST00000575513 CHMP4CQ96CF2 233 aa15.87■□□□□ 0.13
CIITA-210ENST00000575513 DDX11Q96FC9 970 aa15.87■□□□□ 0.13
CIITA-210ENST00000575513 TMEM87BQ96K49 555 aa15.87■□□□□ 0.13
CIITA-210ENST00000575513 AGBL1Q96MI9 1066 aa15.87■□□□□ 0.13
CIITA-210ENST00000575513 DEFB118Q96PH6 123 aa15.87■□□□□ 0.13
CIITA-210ENST00000575513 TRERF1Q96PN7 1200 aa15.87■□□□□ 0.13
CIITA-210ENST00000575513 WDR19Q8NEZ3 1342 aa15.87■□□□□ 0.13
CIITA-210ENST00000575513 RBBP6Q7Z6E9 1792 aaKnown RBP15.87■□□□□ 0.13
CIITA-210ENST00000575513 LIFRP42702 1097 aa15.86■□□□□ 0.13
CIITA-210ENST00000575513 KRT32Q14532 448 aa15.86■□□□□ 0.13
CIITA-210ENST00000575513 TMEM67Q5HYA8 995 aa15.86■□□□□ 0.13
CIITA-210ENST00000575513 ANKRD35Q8N283 1001 aa15.86■□□□□ 0.13
CIITA-210ENST00000575513 KCNB2Q92953 911 aa15.86■□□□□ 0.13
CIITA-210ENST00000575513 MAP3K14Q99558 947 aa15.86■□□□□ 0.13
CIITA-210ENST00000575513 CCPG1Q9ULG6 757 aa15.86■□□□□ 0.13
CIITA-210ENST00000575513 COL11A1P12107 1806 aaPredicted RBP15.85■□□□□ 0.13
CIITA-210ENST00000575513 PALM3A6NDB9 673 aaPredicted RBP15.85■□□□□ 0.13
CIITA-210ENST00000575513 MSCO60682 206 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 PGK2P07205 417 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 GOLGA8HP0CJ92 632 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 ALAS1P13196 640 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 TROAPQ12815 778 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 CCDC174Q6PII3 467 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 MAMDC4Q6UXC1 1216 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 CATIPQ7Z7H3 387 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 ANKLE1Q8NAG6 615 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 SHISA4Q96DD7 197 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 TINF2Q9BSI4 451 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 RNF146Q9NTX7 359 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 PFASO15067 1338 aa15.85■□□□□ 0.13
CIITA-210ENST00000575513 PRC1O43663 620 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 TFRCP02786 760 aaKnown RBP15.84■□□□□ 0.13
CIITA-210ENST00000575513 HMGB1P09429 215 aaKnown RBP15.84■□□□□ 0.13
CIITA-210ENST00000575513 CYBAP13498 195 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 CYP2C19P33261 490 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 SLC4A3P48751 1232 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 SNAP25P60880 206 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 CHST3Q7LGC8 479 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 UBE2Q1Q7Z7E8 422 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 ADGRF4Q8IZF3 695 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 NEK1Q96PY6 1258 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 UBA5Q9GZZ9 404 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 LY9Q9HBG7 655 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 HOMER2Q9NSB8 354 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 MAD2L2Q9UI95 211 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 OGDHLQ9ULD0 1010 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 SYNGAP1Q96PV0 1343 aa15.84■□□□□ 0.13
CIITA-210ENST00000575513 KLRF2D3W0D1 207 aa15.83■□□□□ 0.12
CIITA-210ENST00000575513 DDAH1O94760 285 aa15.83■□□□□ 0.12
CIITA-210ENST00000575513 CCND3P30281 292 aaPredicted RBP15.83■□□□□ 0.12
CIITA-210ENST00000575513 HSPA4P34932 840 aa15.83■□□□□ 0.12
CIITA-210ENST00000575513 GRM4Q14833 912 aa15.83■□□□□ 0.12
CIITA-210ENST00000575513 LHX8Q68G74 356 aa15.83■□□□□ 0.12
CIITA-210ENST00000575513 RASEFQ8IZ41 740 aa15.83■□□□□ 0.12
CIITA-210ENST00000575513 FAM133AQ8N9E0 248 aa15.83■□□□□ 0.12
CIITA-210ENST00000575513 RGS22Q8NE09 1264 aa15.83■□□□□ 0.12
CIITA-210ENST00000575513 A1CFQ9NQ94 594 aaKnown RBP15.83■□□□□ 0.12
CIITA-210ENST00000575513 LOC102724159A0A0B4J2E5 919 aa15.82■□□□□ 0.12
CIITA-210ENST00000575513 POTEB2H3BUK9 544 aa15.82■□□□□ 0.12
CIITA-210ENST00000575513 SH2B2O14492 632 aaPredicted RBP15.82■□□□□ 0.12
CIITA-210ENST00000575513 SMARCA1P28370 1054 aa15.82■□□□□ 0.12
CIITA-210ENST00000575513 EXOSC10Q01780 885 aaKnown RBP15.82■□□□□ 0.12
CIITA-210ENST00000575513 PWP2Q15269 919 aaKnown RBP15.82■□□□□ 0.12
CIITA-210ENST00000575513 DHX32Q7L7V1 743 aaKnown RBP15.82■□□□□ 0.12
CIITA-210ENST00000575513 SGMS1Q86VZ5 419 aa15.82■□□□□ 0.12
CIITA-210ENST00000575513 STAG2Q8N3U4 1231 aa15.82■□□□□ 0.12
CIITA-210ENST00000575513 MTMR8Q96EF0 704 aa15.82■□□□□ 0.12
CIITA-210ENST00000575513 JMJD4Q9H9V9 463 aa15.82■□□□□ 0.12
CIITA-210ENST00000575513 SENP2Q9HC62 589 aa15.82■□□□□ 0.12
CIITA-210ENST00000575513 CYP39A1Q9NYL5 469 aa15.82■□□□□ 0.12
CIITA-210ENST00000575513 DDX20Q9UHI6 824 aaKnown RBP15.82■□□□□ 0.12
CIITA-210ENST00000575513 GTF3C3Q9Y5Q9 886 aa15.82■□□□□ 0.12
CIITA-210ENST00000575513 SEPT4O43236 478 aa15.81■□□□□ 0.12
CIITA-210ENST00000575513 EIF5BO60841 1220 aaKnown RBP15.81■□□□□ 0.12
CIITA-210ENST00000575513 CALM1P0DP23 149 aa15.81■□□□□ 0.12
CIITA-210ENST00000575513 CALM2P0DP24 149 aa15.81■□□□□ 0.12
CIITA-210ENST00000575513 CALM3P0DP25 149 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms