RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 RAVER2Q9HCJ3 691 aaKnown RBP12.45□□□□□ -0.42
LITAF-216ENST00000574848 REC8O95072 547 aa12.44□□□□□ -0.42
LITAF-216ENST00000574848 ZNF865P0CJ78 1059 aaPredicted RBP12.44□□□□□ -0.42
LITAF-216ENST00000574848 SNHG28P0DPA3 235 aa12.44□□□□□ -0.42
LITAF-216ENST00000574848 CNGA1P29973 690 aa12.44□□□□□ -0.42
LITAF-216ENST00000574848 RBM25P49756 843 aaKnown RBP12.44□□□□□ -0.42
LITAF-216ENST00000574848 HAND2P61296 217 aa12.44□□□□□ -0.42
LITAF-216ENST00000574848 TKFCQ3LXA3 575 aa12.44□□□□□ -0.42
LITAF-216ENST00000574848 CPXCR1Q8N123 301 aa12.44□□□□□ -0.42
LITAF-216ENST00000574848 TTC14Q96N46 770 aa12.44□□□□□ -0.42
LITAF-216ENST00000574848 TMEM47Q9BQJ4 181 aa12.44□□□□□ -0.42
LITAF-216ENST00000574848 IL25Q9H293 177 aa12.44□□□□□ -0.42
LITAF-216ENST00000574848 ACAD9Q9H845 621 aa12.44□□□□□ -0.42
LITAF-216ENST00000574848 CTDP1Q9Y5B0 961 aaPredicted RBP12.44□□□□□ -0.42
LITAF-216ENST00000574848 LTBP2Q14767 1821 aa12.44□□□□□ -0.42
LITAF-216ENST00000574848 ZNF213O14771 459 aa12.43□□□□□ -0.42
LITAF-216ENST00000574848 FXR1P51114 621 aaKnown RBP eCLIP12.43□□□□□ -0.42
LITAF-216ENST00000574848 LRRC26Q2I0M4 334 aa12.43□□□□□ -0.42
LITAF-216ENST00000574848 RRP12Q5JTH9 1297 aaKnown RBP12.43□□□□□ -0.42
LITAF-216ENST00000574848 KCTD1Q719H9 257 aa12.43□□□□□ -0.42
LITAF-216ENST00000574848 C7orf61Q8IZ16 206 aa12.43□□□□□ -0.42
LITAF-216ENST00000574848 ARRDC4Q8NCT1 418 aa12.43□□□□□ -0.42
LITAF-216ENST00000574848 ESR2Q92731 530 aa12.43□□□□□ -0.42
LITAF-216ENST00000574848 RANBP17Q9H2T7 1088 aaKnown RBP12.43□□□□□ -0.42
LITAF-216ENST00000574848 TOMM22Q9NS69 142 aa12.43□□□□□ -0.42
LITAF-216ENST00000574848 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
LITAF-216ENST00000574848 PRR12Q9ULL5 1215 aa12.43□□□□□ -0.42
LITAF-216ENST00000574848 TRIOBPQ9H2D6 2365 aa12.43□□□□□ -0.42
LITAF-216ENST00000574848 DNAH12Q6ZR08 3092 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 MCM3APO60318 1980 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 PDHBP11177 359 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 AKR1A1P14550 325 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 SNX17Q15036 470 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 PRAMEF19Q5SWL8 479 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 DGKHQ86XP1 1220 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 FAM133AQ8N9E0 248 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 DDX11Q96FC9 970 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 GDF15Q99988 308 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 A1CFQ9NQ94 594 aaKnown RBP12.42□□□□□ -0.42
LITAF-216ENST00000574848 RNF146Q9NTX7 359 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 CTNNA3Q9UI47 895 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 CNPY2Q9Y2B0 182 aa12.42□□□□□ -0.42
LITAF-216ENST00000574848 SMCHD1A6NHR9 2005 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 KBTBD13C9JR72 458 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 SNAI1O95863 264 aaPredicted RBP12.41□□□□□ -0.42
LITAF-216ENST00000574848 ICAM1P05362 532 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 RARBP10826 455 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 TAL1P17542 331 aaPredicted RBP12.41□□□□□ -0.42
LITAF-216ENST00000574848 BMP8BP34820 402 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 ZNF543Q08ER8 600 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 IKQ13123 557 aaPredicted RBP12.41□□□□□ -0.42
LITAF-216ENST00000574848 LRRC41Q15345 812 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 IMMTQ16891 758 aaKnown RBP12.41□□□□□ -0.42
LITAF-216ENST00000574848 CCDC96Q2M329 555 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 CCDC178Q5BJE1 867 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 C1orf53Q5VUE5 145 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 ANKRD35Q8N283 1001 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 ANKS1AQ92625 1134 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 AGBL1Q96MI9 1066 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 KATNBL1Q9H079 304 aa12.41□□□□□ -0.42
LITAF-216ENST00000574848 WDR19Q8NEZ3 1342 aa12.4□□□□□ -0.42
LITAF-216ENST00000574848 EPB41L2O43491 1005 aaKnown RBP12.4□□□□□ -0.42
LITAF-216ENST00000574848 ADAMTS4O75173 837 aa12.4□□□□□ -0.42
LITAF-216ENST00000574848 GPATCH4Q5T3I0 446 aaKnown RBP12.4□□□□□ -0.42
LITAF-216ENST00000574848 GJC2Q5T442 439 aaPredicted RBP12.4□□□□□ -0.42
LITAF-216ENST00000574848 SYDE2Q5VT97 1194 aa12.4□□□□□ -0.42
LITAF-216ENST00000574848 ANO1Q5XXA6 986 aa12.4□□□□□ -0.42
LITAF-216ENST00000574848 IQCA1Q86XH1 822 aa12.4□□□□□ -0.42
LITAF-216ENST00000574848 SENP6Q9GZR1 1112 aaPredicted RBP12.4□□□□□ -0.42
LITAF-216ENST00000574848 CNNM2Q9H8M5 875 aa12.4□□□□□ -0.42
LITAF-216ENST00000574848 XPNPEP3Q9NQH7 507 aa12.4□□□□□ -0.42
LITAF-216ENST00000574848 HOMER2Q9NSB8 354 aa12.4□□□□□ -0.42
LITAF-216ENST00000574848 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.4□□□□□ -0.42
LITAF-216ENST00000574848 PNMA2Q9UL42 364 aa12.4□□□□□ -0.42
LITAF-216ENST00000574848 ISY1Q9ULR0 285 aaKnown RBP12.4□□□□□ -0.42
LITAF-216ENST00000574848 PHF24Q9UPV7 400 aa12.4□□□□□ -0.42
LITAF-216ENST00000574848 ASTN1O14525 1302 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 KDM4AO75164 1064 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 CHMLP26374 656 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 CST5P28325 142 aaPredicted RBP12.39□□□□□ -0.43
LITAF-216ENST00000574848 NKX3-2P78367 333 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 TTBK2Q6IQ55 1244 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 ARMCX2Q7L311 632 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 HSCBQ8IWL3 235 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 IL27Q8NEV9 243 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 RUFY2Q8WXA3 655 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 TRERF1Q96PN7 1200 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 ANP32EQ9BTT0 268 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 KRT23Q9C075 422 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 ABHD16BQ9H3Z7 469 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 CYP39A1Q9NYL5 469 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 FAM184BQ9ULE4 1060 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 CCPG1Q9ULG6 757 aa12.39□□□□□ -0.43
LITAF-216ENST00000574848 ZMYND8Q9ULU4 1186 aaPredicted RBP12.39□□□□□ -0.43
LITAF-216ENST00000574848 FRMPD2Q68DX3 1309 aaPredicted RBP12.38□□□□□ -0.43
LITAF-216ENST00000574848 SYNRGQ9UMZ2 1314 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 LOC102724159A0A0B4J2E5 919 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 SOWAHBA6NEL2 793 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 B4E1Z4 1266 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms