RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 PI4KBQ9UBF8 816 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 BIN2Q9UBW5 565 aaPredicted RBP15.91■□□□□ 0.14
VPS33B-208ENST00000574755 FAM198AQ9UFP1 575 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 SFPQP23246 707 aaKnown RBP eCLIP15.91■□□□□ 0.14
VPS33B-208ENST00000574755 CCDC96Q2M329 555 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 JAKMIP3Q5VZ66 844 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 KLHL10Q6JEL2 608 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 TRIM34Q9BYJ4 488 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 DISC1Q9NRI5 854 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 PP2D1A8MPX8 630 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 PPIP5K2O43314 1243 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 C21orf2O43822 256 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 PRPHP41219 470 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 UBA7P41226 1012 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 CT47A1Q5JQC4 288 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-208ENST00000574755 PPP4R3BQ5MIZ7 849 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 GPATCH4Q5T3I0 446 aaKnown RBP15.9■□□□□ 0.14
VPS33B-208ENST00000574755 CC2D2BQ6DHV5 1058 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 POTEAQ6S8J7 498 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 ADGRF4Q8IZF3 695 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 SUPT20HQ8NEM7 779 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 TBCKQ8TEA7 893 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 PRIMPOLQ96LW4 560 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 C16orf45Q96MC5 204 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-208ENST00000574755 RGS17Q9UGC6 210 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-208ENST00000574755 RAD21O60216 631 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 ZNF18P17022 549 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 ADCY7P51828 1080 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 CUL4BQ13620 913 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 DHX8Q14562 1220 aaKnown RBP15.9■□□□□ 0.14
VPS33B-208ENST00000574755 CERKLQ49MI3 558 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-208ENST00000574755 ARMCX5Q6P1M9 558 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 SMYD4Q8IYR2 804 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-208ENST00000574755 MED15Q96RN5 788 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 MTRQ99707 1265 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 JMJD4Q9H9V9 463 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 SYNRGQ9UMZ2 1314 aa15.9■□□□□ 0.14
VPS33B-208ENST00000574755 GTPBP6O43824 516 aaPredicted RBP15.89■□□□□ 0.13
VPS33B-208ENST00000574755 OR52Z1P0C646 297 aa15.89■□□□□ 0.13
VPS33B-208ENST00000574755 CD44P16070 742 aaKnown RBP15.89■□□□□ 0.13
VPS33B-208ENST00000574755 TPD52L1Q16890 204 aaPredicted RBP15.89■□□□□ 0.13
VPS33B-208ENST00000574755 KCTD1Q719H9 257 aa15.89■□□□□ 0.13
VPS33B-208ENST00000574755 SAMSN1Q9NSI8 373 aaKnown RBP15.89■□□□□ 0.13
VPS33B-208ENST00000574755 TMEM260Q9NX78 707 aa15.89■□□□□ 0.13
VPS33B-208ENST00000574755 PNMA6FA0A0J9YX94 578 aa15.89■□□□□ 0.13
VPS33B-208ENST00000574755 SLC16A2P36021 539 aa15.89■□□□□ 0.13
VPS33B-208ENST00000574755 RRAGBQ5VZM2 374 aa15.89■□□□□ 0.13
VPS33B-208ENST00000574755 TTBK2Q6IQ55 1244 aa15.89■□□□□ 0.13
VPS33B-208ENST00000574755 SH3BP5LQ7L8J4 393 aa15.89■□□□□ 0.13
VPS33B-208ENST00000574755 TDRD3Q9H7E2 651 aaKnown RBP15.89■□□□□ 0.13
VPS33B-208ENST00000574755 TMEM232C9JQI7 657 aa15.88■□□□□ 0.13
VPS33B-208ENST00000574755 NRDCO43847 1150 aa15.88■□□□□ 0.13
VPS33B-208ENST00000574755 STX17P56962 302 aa15.88■□□□□ 0.13
VPS33B-208ENST00000574755 VSTM4Q8IW00 320 aa15.88■□□□□ 0.13
VPS33B-208ENST00000574755 PDGFDQ9GZP0 370 aaPredicted RBP15.88■□□□□ 0.13
VPS33B-208ENST00000574755 YDJCA8MPS7 323 aa15.87■□□□□ 0.13
VPS33B-208ENST00000574755 SPATA1Q5VX52 437 aa15.87■□□□□ 0.13
VPS33B-208ENST00000574755 CCSER1Q9C0I3 900 aa15.87■□□□□ 0.13
VPS33B-208ENST00000574755 PPP1R3GB7ZBB8 358 aa15.87■□□□□ 0.13
VPS33B-208ENST00000574755 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
VPS33B-208ENST00000574755 EEF2P13639 858 aaKnown RBP15.87■□□□□ 0.13
VPS33B-208ENST00000574755 PTPN21Q16825 1174 aa15.87■□□□□ 0.13
VPS33B-208ENST00000574755 SHROOM1Q2M3G4 852 aaPredicted RBP15.87■□□□□ 0.13
VPS33B-208ENST00000574755 AK8Q96MA6 479 aa15.87■□□□□ 0.13
VPS33B-208ENST00000574755 PLIN2Q99541 437 aa15.87■□□□□ 0.13
VPS33B-208ENST00000574755 KANSL2Q9H9L4 492 aa15.87■□□□□ 0.13
VPS33B-208ENST00000574755 INTS13Q9NVM9 706 aa15.87■□□□□ 0.13
VPS33B-208ENST00000574755 RMND1Q9NWS8 449 aa15.87■□□□□ 0.13
VPS33B-208ENST00000574755 RPN1P04843 607 aaKnown RBP15.86■□□□□ 0.13
VPS33B-208ENST00000574755 NAALADL2Q58DX5 795 aa15.86■□□□□ 0.13
VPS33B-208ENST00000574755 PPP1R18Q6NYC8 613 aa15.86■□□□□ 0.13
VPS33B-208ENST00000574755 USP27XA6NNY8 438 aa15.86■□□□□ 0.13
VPS33B-208ENST00000574755 USP17L10C9JJH3 530 aa15.86■□□□□ 0.13
VPS33B-208ENST00000574755 ZBTB5O15062 677 aa15.86■□□□□ 0.13
VPS33B-208ENST00000574755 PPP1R11O60927 126 aaPredicted RBP15.86■□□□□ 0.13
VPS33B-208ENST00000574755 ORC2Q13416 577 aaPredicted RBP15.86■□□□□ 0.13
VPS33B-208ENST00000574755 TATDN1Q6P1N9 297 aa15.86■□□□□ 0.13
VPS33B-208ENST00000574755 POTEDQ86YR6 584 aa15.86■□□□□ 0.13
VPS33B-208ENST00000574755 MYRIPQ8NFW9 859 aa15.86■□□□□ 0.13
VPS33B-208ENST00000574755 CTNND2Q9UQB3 1225 aa15.86■□□□□ 0.13
VPS33B-208ENST00000574755 TNNT1P13805 278 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 TECP42680 631 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 SLC1A4P43007 532 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 CABP7Q86V35 215 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 TTLL6Q8N841 843 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 PRMT6Q96LA8 375 aaPredicted RBP15.85■□□□□ 0.13
VPS33B-208ENST00000574755 RIC8AQ9NPQ8 531 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 NYAP2Q9P242 653 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 GDF11O95390 407 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 ICA1Q05084 483 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 SEPT2Q15019 361 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 CCDC93Q567U6 631 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 ZNF658Q5TYW1 1059 aaPredicted RBP15.85■□□□□ 0.13
VPS33B-208ENST00000574755 TMEM179Q6ZVK1 233 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 CUL5Q93034 780 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 MKL1Q969V6 931 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 TRMT1Q9NXH9 659 aaKnown RBP15.85■□□□□ 0.13
VPS33B-208ENST00000574755 PSME4Q14997 1843 aa15.85■□□□□ 0.13
VPS33B-208ENST00000574755 ENTPD3O75355 529 aa15.84■□□□□ 0.13
VPS33B-208ENST00000574755 TNNI2P48788 182 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms