RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 GNL3LQ9NVN8 582 aaKnown RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 CRIM1Q9NZV1 1036 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 CGGBP1Q9UFW8 167 aaPredicted RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 RCAN3Q9UKA8 241 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 FBXL21Q9UKT6 434 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 INTUQ9ULD6 942 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 PPP1R9AQ9ULJ8 1098 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 ANKRD6Q9Y2G4 727 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 DIS3Q9Y2L1 958 aaKnown RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 TRAF6Q9Y4K3 522 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 ZNF891A8MT65 544 aaPredicted RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 K7ESF4 209 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 CBX4O00257 560 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 SHOXO15266 292 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 TMPRSS2O15393 492 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 DDX3YO15523 660 aaKnown RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 GAS7O60861 476 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 LILRB5O75023 590 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 ULK1O75385 1050 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 SCG5P05408 212 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 CENPBP07199 599 aaPredicted RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 PF4V1P10720 104 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 KCNA6P17658 529 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 CYP2C19P33261 490 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 NTF4P34130 210 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 CD68P34810 354 aaPredicted RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 CAP2P40123 477 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 ADCYAP1R1P41586 468 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 ECI1P42126 302 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 RECQLP46063 649 aaPredicted RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 DGKGP49619 791 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 NEK3P51956 506 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 ZNF445P59923 1031 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 RNF4P78317 190 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 GTF2H3Q13889 308 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 RGL3Q3MIN7 710 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 ATP13A4Q4VNC1 1196 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 ARHGAP29Q52LW3 1261 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 COBLL1Q53SF7 1204 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 SLC35F1Q5T1Q4 408 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 SPTY2D1Q68D10 685 aaPredicted RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 IL31Q6EBC2 164 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 STYK1Q6J9G0 422 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 PNMA8AQ86V59 439 aaPredicted RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 C11orf74Q86VG3 221 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 FCHSD1Q86WN1 690 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 IFNL3Q8IZI9 196 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 CRIPAKQ8N1N5 446 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 CBARPQ8N350 705 aaPredicted RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 PJA1Q8NG27 643 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 USP33Q8TEY7 942 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 XAGE3Q8WTP9 111 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 DCAF4Q8WV16 495 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 UBE2Q2Q8WVN8 375 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 PPM1EQ8WY54 764 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 TIFAQ96CG3 184 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 CLIP3Q96DZ5 547 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 AHCYL2Q96HN2 611 aaKnown RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 SCYL1Q96KG9 808 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 GPR101Q96P66 508 aaPredicted RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 FANCD2OSQ96PS1 177 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 NAP1L4Q99733 375 aaKnown RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 SARGQ9BW04 601 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 SLC13A1Q9BZW2 595 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 FOXQ1Q9C009 403 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 NKX2-4Q9H2Z4 354 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 ATXN3LQ9H3M9 355 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 NOL6Q9H6R4 1146 aaKnown RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 PPCSQ9HAB8 311 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 TCF7L1Q9HCS4 588 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 CYP26B1Q9NR63 512 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 ATG3Q9NT62 314 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 TERF2IPQ9NYB0 399 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 GGA1Q9UJY5 639 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 PNMA8BQ9ULN7 279 aaPredicted RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 NSFL1CQ9UNZ2 370 aaKnown RBP2.67□□□□□ -1.98
CHD3-217ENST00000574022 CEP131Q9UPN4 1083 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 ZKSCAN5Q9Y2L8 839 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 GIT1Q9Y2X7 761 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 STARD13Q9Y3M8 1113 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 DAAM1Q9Y4D1 1078 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 PCDHB12Q9Y5F1 795 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 PCDHA8Q9Y5H6 950 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 ASXL2Q76L83 1435 aa2.67□□□□□ -1.98
CHD3-217ENST00000574022 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 ANO9A1A5B4 782 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 NPHP1O15259 732 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 NRDCO43847 1150 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 RNGTTO60942 597 aaKnown RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 ADAM11O75078 769 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 VAMP4O75379 141 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 GLRX3O76003 335 aaKnown RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 MT-CO1P00395 513 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 CFBP00751 764 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 FGAP02671 866 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 LTFP02788 710 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 ITIH2P19823 946 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 GRIK1P39086 918 aa2.66□□□□□ -1.98
CHD3-217ENST00000574022 IARSP41252 1262 aaKnown RBP2.66□□□□□ -1.98
CHD3-217ENST00000574022 MAP2K3P46734 347 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms