RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 MSL3Q8N5Y2 521 aaKnown RBP16.28■□□□□ 0.2
RPAIN-211ENST00000572174 TRIB2Q92519 343 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 DDX11Q96FC9 970 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 NEK1Q96PY6 1258 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 MAP3K14Q99558 947 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 MAF1Q9H063 256 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 HMX1Q9NP08 348 aaPredicted RBP16.28■□□□□ 0.2
RPAIN-211ENST00000572174 GPCPD1Q9NPB8 672 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 CCPG1Q9ULG6 757 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 CENPFP49454 3210 aa16.28■□□□□ 0.2
RPAIN-211ENST00000572174 PRC1O43663 620 aa16.27■□□□□ 0.2
RPAIN-211ENST00000572174 DHX16O60231 1041 aaKnown RBP16.27■□□□□ 0.2
RPAIN-211ENST00000572174 GJB1P08034 283 aa16.27■□□□□ 0.2
RPAIN-211ENST00000572174 KIF5BP33176 963 aa16.27■□□□□ 0.2
RPAIN-211ENST00000572174 LIFRP42702 1097 aa16.27■□□□□ 0.2
RPAIN-211ENST00000572174 RGS19P49795 217 aa16.27■□□□□ 0.2
RPAIN-211ENST00000572174 SOX10P56693 466 aa16.27■□□□□ 0.2
RPAIN-211ENST00000572174 ANKRD35Q8N283 1001 aa16.27■□□□□ 0.2
RPAIN-211ENST00000572174 RNF146Q9NTX7 359 aa16.27■□□□□ 0.2
RPAIN-211ENST00000572174 NRBP1Q9UHY1 535 aa16.27■□□□□ 0.2
RPAIN-211ENST00000572174 BAZ2BQ9UIF8 2168 aaKnown RBP16.27■□□□□ 0.19
RPAIN-211ENST00000572174 CCDC69A6NI79 296 aa16.26■□□□□ 0.19
RPAIN-211ENST00000572174 MSCO60682 206 aa16.26■□□□□ 0.19
RPAIN-211ENST00000572174 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
RPAIN-211ENST00000572174 PSMA5P28066 241 aa16.26■□□□□ 0.19
RPAIN-211ENST00000572174 HSPA4P34932 840 aa16.26■□□□□ 0.19
RPAIN-211ENST00000572174 SLC4A3P48751 1232 aa16.26■□□□□ 0.19
RPAIN-211ENST00000572174 CCDC174Q6PII3 467 aa16.26■□□□□ 0.19
RPAIN-211ENST00000572174 SYNE3Q6ZMZ3 975 aa16.26■□□□□ 0.19
RPAIN-211ENST00000572174 NFXL1Q6ZNB6 911 aa16.26■□□□□ 0.19
RPAIN-211ENST00000572174 CTCFLQ8NI51 663 aaPredicted RBP16.26■□□□□ 0.19
RPAIN-211ENST00000572174 ALAS1P13196 640 aa16.25■□□□□ 0.19
RPAIN-211ENST00000572174 SLC16A2P36021 539 aa16.25■□□□□ 0.19
RPAIN-211ENST00000572174 GJA8P48165 433 aa16.25■□□□□ 0.19
RPAIN-211ENST00000572174 GNAQP50148 359 aa16.25■□□□□ 0.19
RPAIN-211ENST00000572174 GRM4Q14833 912 aa16.25■□□□□ 0.19
RPAIN-211ENST00000572174 MAP3K21Q5TCX8 1036 aa16.25■□□□□ 0.19
RPAIN-211ENST00000572174 TTBK2Q6IQ55 1244 aa16.25■□□□□ 0.19
RPAIN-211ENST00000572174 RASGRP2Q7LDG7 609 aa16.25■□□□□ 0.19
RPAIN-211ENST00000572174 ZNF467Q7Z7K2 595 aaPredicted RBP16.25■□□□□ 0.19
RPAIN-211ENST00000572174 IGDCC4Q8TDY8 1250 aa16.25■□□□□ 0.19
RPAIN-211ENST00000572174 CHMP4CQ96CF2 233 aa16.25■□□□□ 0.19
RPAIN-211ENST00000572174 TRERF1Q96PN7 1200 aa16.25■□□□□ 0.19
RPAIN-211ENST00000572174 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.25■□□□□ 0.19
RPAIN-211ENST00000572174 PAK6Q9NQU5 681 aaPredicted RBP16.25■□□□□ 0.19
RPAIN-211ENST00000572174 ZNF536O15090 1300 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 ANTXR2P58335 489 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 FGD1P98174 961 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 MLLT1Q03111 559 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-211ENST00000572174 MTFR1Q15390 333 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 DHX32Q7L7V1 743 aaKnown RBP16.24■□□□□ 0.19
RPAIN-211ENST00000572174 ZNF654Q8IZM8 581 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 MAML3Q96JK9 1138 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 MPHOSPH6Q99547 160 aaKnown RBP16.24■□□□□ 0.19
RPAIN-211ENST00000572174 LZTS2Q9BRK4 669 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 UNC93B1Q9H1C4 597 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 LY9Q9HBG7 655 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 HOMER2Q9NSB8 354 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 RIPK3Q9Y572 518 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 SLC12A7Q9Y666 1083 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 TAF6LQ9Y6J9 622 aa16.24■□□□□ 0.19
RPAIN-211ENST00000572174 LCTP09848 1927 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 ABCB11O95342 1321 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 SYNGAP1Q96PV0 1343 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 LOC102724159A0A0B4J2E5 919 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 KLRF2D3W0D1 207 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 SH2B2O14492 632 aaPredicted RBP16.23■□□□□ 0.19
RPAIN-211ENST00000572174 MYCP01106 439 aaPredicted RBP16.23■□□□□ 0.19
RPAIN-211ENST00000572174 GOLGA8HP0CJ92 632 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 PWP2Q15269 919 aaKnown RBP16.23■□□□□ 0.19
RPAIN-211ENST00000572174 CDC37Q16543 378 aaPredicted RBP16.23■□□□□ 0.19
RPAIN-211ENST00000572174 ZNF792Q3KQV3 632 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 CHST3Q7LGC8 479 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 SGMS1Q86VZ5 419 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 NPLOC4Q8TAT6 608 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 U2AF1L4Q8WU68 220 aaKnown RBP16.23■□□□□ 0.19
RPAIN-211ENST00000572174 KCNB2Q92953 911 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 AGBL1Q96MI9 1066 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 CNPY2Q9Y2B0 182 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 PDE4DIPQ5VU43 2346 aa16.23■□□□□ 0.19
RPAIN-211ENST00000572174 DNAJC25-GNG10A0A024R161 153 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 PALM3A6NDB9 673 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-211ENST00000572174 B4DLN1 442 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 COBLO75128 1261 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 SGPL1O95470 568 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 SMARCA1P28370 1054 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 MRPL12P52815 198 aaKnown RBP16.22■□□□□ 0.19
RPAIN-211ENST00000572174 RCAN1P53805 252 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 CACNB2Q08289 660 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-211ENST00000572174 TROAPQ12815 778 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 CCL14Q16627 93 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 BLOC1S2Q6QNY1 142 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 MCF2L2Q86YR7 1114 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 ADGRF4Q8IZF3 695 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 ANKLE1Q8NAG6 615 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 NUP133Q8WUM0 1156 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 ADD3Q9UEY8 706 aaKnown RBP16.22■□□□□ 0.19
RPAIN-211ENST00000572174 MAD2L2Q9UI95 211 aa16.22■□□□□ 0.19
RPAIN-211ENST00000572174 POTEFA5A3E0 1075 aa16.21■□□□□ 0.19
RPAIN-211ENST00000572174 ASB14A6NK59 587 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms