RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ENAHQ8N8S7 591 aaPredicted RBP17.09■□□□□ 0.33
LITAF-208ENST00000571627 ANKLE1Q8NAG6 615 aa17.09■□□□□ 0.33
LITAF-208ENST00000571627 DPF3Q92784 378 aa17.09■□□□□ 0.33
LITAF-208ENST00000571627 DDX11Q96FC9 970 aa17.09■□□□□ 0.33
LITAF-208ENST00000571627 CNNM2Q9H8M5 875 aa17.09■□□□□ 0.33
LITAF-208ENST00000571627 RNF146Q9NTX7 359 aa17.09■□□□□ 0.33
LITAF-208ENST00000571627 DDX20Q9UHI6 824 aaKnown RBP17.09■□□□□ 0.33
LITAF-208ENST00000571627 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
LITAF-208ENST00000571627 LCTP09848 1927 aa17.09■□□□□ 0.33
LITAF-208ENST00000571627 DNAJC25-GNG10A0A024R161 153 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 GOLGA8HP0CJ92 632 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 SNHG28P0DPA3 235 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 ALAS1P13196 640 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 NT5C2P49902 561 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 BTNL9Q6UXG8 535 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 NECAB2Q7Z6G3 386 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 ANKRD35Q8N283 1001 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 PNMA1Q8ND90 353 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 CHST13Q8NET6 341 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 TINF2Q9BSI4 451 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 HTATIP2Q9BUP3 242 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 CPVLQ9H3G5 476 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 FBXO40Q9UH90 709 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 MYH6P13533 1939 aa17.08■□□□□ 0.32
LITAF-208ENST00000571627 DNAH12Q6ZR08 3092 aa17.07■□□□□ 0.32
LITAF-208ENST00000571627 CAPN2P17655 700 aa17.07■□□□□ 0.32
LITAF-208ENST00000571627 MUM1L1Q5H9M0 696 aa17.07■□□□□ 0.32
LITAF-208ENST00000571627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.07■□□□□ 0.32
LITAF-208ENST00000571627 MAP4K1Q92918 833 aa17.07■□□□□ 0.32
LITAF-208ENST00000571627 TRERF1Q96PN7 1200 aa17.07■□□□□ 0.32
LITAF-208ENST00000571627 ESYT1Q9BSJ8 1104 aa17.07■□□□□ 0.32
LITAF-208ENST00000571627 UBAC1Q9BSL1 405 aa17.07■□□□□ 0.32
LITAF-208ENST00000571627 RANBP17Q9H2T7 1088 aaKnown RBP17.07■□□□□ 0.32
LITAF-208ENST00000571627 ACAD9Q9H845 621 aa17.07■□□□□ 0.32
LITAF-208ENST00000571627 KAT14Q9H8E8 782 aa17.07■□□□□ 0.32
LITAF-208ENST00000571627 CCPG1Q9ULG6 757 aa17.07■□□□□ 0.32
LITAF-208ENST00000571627 DIS3Q9Y2L1 958 aaKnown RBP17.07■□□□□ 0.32
LITAF-208ENST00000571627 RBM8AQ9Y5S9 174 aaKnown RBP17.07■□□□□ 0.32
LITAF-208ENST00000571627 E7EWF7 191 aa17.06■□□□□ 0.32
LITAF-208ENST00000571627 H0YGN5 161 aa17.06■□□□□ 0.32
LITAF-208ENST00000571627 CNTN2Q02246 1040 aa17.06■□□□□ 0.32
LITAF-208ENST00000571627 CCDC178Q5BJE1 867 aa17.06■□□□□ 0.32
LITAF-208ENST00000571627 STOX1Q6ZVD7 989 aa17.06■□□□□ 0.32
LITAF-208ENST00000571627 ANKS1AQ92625 1134 aa17.06■□□□□ 0.32
LITAF-208ENST00000571627 FGD4Q96M96 766 aa17.06■□□□□ 0.32
LITAF-208ENST00000571627 C11orf49Q9H6J7 331 aa17.06■□□□□ 0.32
LITAF-208ENST00000571627 A1CFQ9NQ94 594 aaKnown RBP17.06■□□□□ 0.32
LITAF-208ENST00000571627 LRRC37A2A6NM11 1700 aa17.05■□□□□ 0.32
LITAF-208ENST00000571627 PFASO15067 1338 aa17.05■□□□□ 0.32
LITAF-208ENST00000571627 SEPT4O43236 478 aa17.05■□□□□ 0.32
LITAF-208ENST00000571627 MSCO60682 206 aa17.05■□□□□ 0.32
LITAF-208ENST00000571627 ICAM1P05362 532 aa17.05■□□□□ 0.32
LITAF-208ENST00000571627 TRDNQ13061 729 aa17.05■□□□□ 0.32
LITAF-208ENST00000571627 KIAA1211Q6ZU35 1233 aa17.05■□□□□ 0.32
LITAF-208ENST00000571627 UBA5Q9GZZ9 404 aa17.05■□□□□ 0.32
LITAF-208ENST00000571627 LSG1Q9H089 658 aaKnown RBP17.05■□□□□ 0.32
LITAF-208ENST00000571627 SEC23AQ15436 765 aa17.04■□□□□ 0.32
LITAF-208ENST00000571627 TKFCQ3LXA3 575 aa17.04■□□□□ 0.32
LITAF-208ENST00000571627 GPATCH4Q5T3I0 446 aaKnown RBP17.04■□□□□ 0.32
LITAF-208ENST00000571627 IFIT1BQ5T764 474 aaKnown RBP17.04■□□□□ 0.32
LITAF-208ENST00000571627 CASC1Q6TDU7 716 aa17.04■□□□□ 0.32
LITAF-208ENST00000571627 CHST3Q7LGC8 479 aa17.04■□□□□ 0.32
LITAF-208ENST00000571627 RALYLQ86SE5 291 aaKnown RBP17.04■□□□□ 0.32
LITAF-208ENST00000571627 LENG1Q96BZ8 264 aaPredicted RBP17.04■□□□□ 0.32
LITAF-208ENST00000571627 POTEB2H3BUK9 544 aa17.03■□□□□ 0.32
LITAF-208ENST00000571627 EVI5O60447 810 aa17.03■□□□□ 0.32
LITAF-208ENST00000571627 SNAI1O95863 264 aaPredicted RBP17.03■□□□□ 0.32
LITAF-208ENST00000571627 MYCNP04198 464 aaPredicted RBP17.03■□□□□ 0.32
LITAF-208ENST00000571627 ZNF865P0CJ78 1059 aaPredicted RBP17.03■□□□□ 0.32
LITAF-208ENST00000571627 COL6A1P12109 1028 aa17.03■□□□□ 0.32
LITAF-208ENST00000571627 NSMFQ6X4W1 530 aa17.03■□□□□ 0.32
LITAF-208ENST00000571627 FAM133AQ8N9E0 248 aa17.03■□□□□ 0.32
LITAF-208ENST00000571627 SENP2Q9HC62 589 aa17.03■□□□□ 0.32
LITAF-208ENST00000571627 ANO2Q9NQ90 1003 aa17.03■□□□□ 0.32
LITAF-208ENST00000571627 ZHX1Q9UKY1 873 aaPredicted RBP17.03■□□□□ 0.32
LITAF-208ENST00000571627 CNPY2Q9Y2B0 182 aa17.03■□□□□ 0.32
LITAF-208ENST00000571627 DDX49Q9Y6V7 483 aaKnown RBP17.03■□□□□ 0.32
LITAF-208ENST00000571627 SYNGAP1Q96PV0 1343 aa17.02■□□□□ 0.32
LITAF-208ENST00000571627 SOWAHBA6NEL2 793 aa17.02■□□□□ 0.32
LITAF-208ENST00000571627 NFIBO00712 420 aa17.02■□□□□ 0.32
LITAF-208ENST00000571627 GJC2Q5T442 439 aaPredicted RBP17.02■□□□□ 0.32
LITAF-208ENST00000571627 MAMDC4Q6UXC1 1216 aa17.02■□□□□ 0.32
LITAF-208ENST00000571627 ZNF467Q7Z7K2 595 aaPredicted RBP17.02■□□□□ 0.32
LITAF-208ENST00000571627 NCOA7Q8NI08 942 aa17.02■□□□□ 0.32
LITAF-208ENST00000571627 PURBQ96QR8 312 aaKnown RBP17.02■□□□□ 0.32
LITAF-208ENST00000571627 CYP39A1Q9NYL5 469 aa17.02■□□□□ 0.32
LITAF-208ENST00000571627 NRBP1Q9UHY1 535 aa17.02■□□□□ 0.32
LITAF-208ENST00000571627 ASTN1O14525 1302 aa17.01■□□□□ 0.31
LITAF-208ENST00000571627 IFIT3O14879 490 aaKnown RBP17.01■□□□□ 0.31
LITAF-208ENST00000571627 CDC45O75419 566 aa17.01■□□□□ 0.31
LITAF-208ENST00000571627 PARP1P09874 1014 aaKnown RBP17.01■□□□□ 0.31
LITAF-208ENST00000571627 ANTXR2P58335 489 aa17.01■□□□□ 0.31
LITAF-208ENST00000571627 COL9A3Q14050 684 aaPredicted RBP17.01■□□□□ 0.31
LITAF-208ENST00000571627 ASPRV1Q53RT3 343 aa17.01■□□□□ 0.31
LITAF-208ENST00000571627 ARMCX2Q7L311 632 aa17.01■□□□□ 0.31
LITAF-208ENST00000571627 CCDC144CPQ8IYA2 1237 aa17.01■□□□□ 0.31
LITAF-208ENST00000571627 MB21D2Q8IYB1 491 aaPredicted RBP17.01■□□□□ 0.31
LITAF-208ENST00000571627 C7orf61Q8IZ16 206 aa17.01■□□□□ 0.31
LITAF-208ENST00000571627 MSL3Q8N5Y2 521 aaKnown RBP17.01■□□□□ 0.31
LITAF-208ENST00000571627 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms