RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 AGBL1Q96MI9 1066 aa16.09■□□□□ 0.17
PRPF8-202ENST00000571346 RNF41Q9H4P4 317 aaPredicted RBP16.09■□□□□ 0.17
PRPF8-202ENST00000571346 PRR12Q9ULL5 1215 aa16.09■□□□□ 0.17
PRPF8-202ENST00000571346 ATP11BQ9Y2G3 1177 aa16.09■□□□□ 0.17
PRPF8-202ENST00000571346 FRMPD2Q68DX3 1309 aaPredicted RBP16.09■□□□□ 0.17
PRPF8-202ENST00000571346 SYNGAP1Q96PV0 1343 aa16.09■□□□□ 0.17
PRPF8-202ENST00000571346 LAMA2P24043 3122 aaKnown RBP16.09■□□□□ 0.17
PRPF8-202ENST00000571346 MCM3APO60318 1980 aa16.08■□□□□ 0.16
PRPF8-202ENST00000571346 DNAJC25-GNG10A0A024R161 153 aa16.08■□□□□ 0.16
PRPF8-202ENST00000571346 ZNF213O14771 459 aa16.08■□□□□ 0.16
PRPF8-202ENST00000571346 TOP1P11387 765 aaKnown RBP16.08■□□□□ 0.16
PRPF8-202ENST00000571346 RTP1P59025 263 aa16.08■□□□□ 0.16
PRPF8-202ENST00000571346 LRRC41Q15345 812 aa16.08■□□□□ 0.16
PRPF8-202ENST00000571346 RCSD1Q6JBY9 416 aa16.08■□□□□ 0.16
PRPF8-202ENST00000571346 FERMT2Q96AC1 680 aa16.08■□□□□ 0.16
PRPF8-202ENST00000571346 TMEM47Q9BQJ4 181 aa16.08■□□□□ 0.16
PRPF8-202ENST00000571346 CCPG1Q9ULG6 757 aa16.08■□□□□ 0.16
PRPF8-202ENST00000571346 ZNF536O15090 1300 aa16.08■□□□□ 0.16
PRPF8-202ENST00000571346 LRRC37A2A6NM11 1700 aa16.08■□□□□ 0.16
PRPF8-202ENST00000571346 A0A1W2PPC1 479 aa16.07■□□□□ 0.16
PRPF8-202ENST00000571346 PGK1P00558 417 aa16.07■□□□□ 0.16
PRPF8-202ENST00000571346 ZNF865P0CJ78 1059 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-202ENST00000571346 PCP11498 1178 aaKnown RBP16.07■□□□□ 0.16
PRPF8-202ENST00000571346 PDE4AP27815 886 aa16.07■□□□□ 0.16
PRPF8-202ENST00000571346 SLC16A2P36021 539 aa16.07■□□□□ 0.16
PRPF8-202ENST00000571346 RNF180Q86T96 592 aa16.07■□□□□ 0.16
PRPF8-202ENST00000571346 MSL3Q8N5Y2 521 aaKnown RBP16.07■□□□□ 0.16
PRPF8-202ENST00000571346 ESR2Q92731 530 aa16.07■□□□□ 0.16
PRPF8-202ENST00000571346 TRERF1Q96PN7 1200 aa16.07■□□□□ 0.16
PRPF8-202ENST00000571346 GDF15Q99988 308 aa16.07■□□□□ 0.16
PRPF8-202ENST00000571346 ZKSCAN3Q9BRR0 538 aa16.07■□□□□ 0.16
PRPF8-202ENST00000571346 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
PRPF8-202ENST00000571346 PRDM5Q9NQX1 630 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-202ENST00000571346 PRKAG2Q9UGJ0 569 aa16.07■□□□□ 0.16
PRPF8-202ENST00000571346 POTEB2H3BUK9 544 aa16.06■□□□□ 0.16
PRPF8-202ENST00000571346 PLA2G6O60733 806 aa16.06■□□□□ 0.16
PRPF8-202ENST00000571346 GSPT1P15170 499 aaKnown RBP16.06■□□□□ 0.16
PRPF8-202ENST00000571346 ADCYAP1R1P41586 468 aa16.06■□□□□ 0.16
PRPF8-202ENST00000571346 NOVP48745 357 aa16.06■□□□□ 0.16
PRPF8-202ENST00000571346 MDM2Q00987 491 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-202ENST00000571346 TTC22Q5TAA0 569 aa16.06■□□□□ 0.16
PRPF8-202ENST00000571346 SYDE2Q5VT97 1194 aa16.06■□□□□ 0.16
PRPF8-202ENST00000571346 TTBK2Q6IQ55 1244 aa16.06■□□□□ 0.16
PRPF8-202ENST00000571346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.06■□□□□ 0.16
PRPF8-202ENST00000571346 ARMCX2Q7L311 632 aa16.06■□□□□ 0.16
PRPF8-202ENST00000571346 ZNF467Q7Z7K2 595 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-202ENST00000571346 UBE2OQ9C0C9 1292 aaKnown RBP16.06■□□□□ 0.16
PRPF8-202ENST00000571346 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
PRPF8-202ENST00000571346 TCP11L1Q9NUJ3 509 aa16.06■□□□□ 0.16
PRPF8-202ENST00000571346 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-202ENST00000571346 SMCHD1A6NHR9 2005 aa16.06■□□□□ 0.16
PRPF8-202ENST00000571346 LTBP2Q14767 1821 aa16.05■□□□□ 0.16
PRPF8-202ENST00000571346 SYNRGQ9UMZ2 1314 aa16.05■□□□□ 0.16
PRPF8-202ENST00000571346 SNAI1O95863 264 aaPredicted RBP16.05■□□□□ 0.16
PRPF8-202ENST00000571346 PDHBP11177 359 aa16.05■□□□□ 0.16
PRPF8-202ENST00000571346 CNTN2Q02246 1040 aa16.05■□□□□ 0.16
PRPF8-202ENST00000571346 IMMTQ16891 758 aaKnown RBP16.05■□□□□ 0.16
PRPF8-202ENST00000571346 TKFCQ3LXA3 575 aa16.05■□□□□ 0.16
PRPF8-202ENST00000571346 TRIM60Q495X7 471 aa16.05■□□□□ 0.16
PRPF8-202ENST00000571346 MAMDC4Q6UXC1 1216 aa16.05■□□□□ 0.16
PRPF8-202ENST00000571346 NSMFQ6X4W1 530 aa16.05■□□□□ 0.16
PRPF8-202ENST00000571346 CCDC144CPQ8IYA2 1237 aa16.05■□□□□ 0.16
PRPF8-202ENST00000571346 FGD4Q96M96 766 aa16.05■□□□□ 0.16
PRPF8-202ENST00000571346 DSCC1Q9BVC3 393 aa16.05■□□□□ 0.16
PRPF8-202ENST00000571346 KDM4AO75164 1064 aa16.04■□□□□ 0.16
PRPF8-202ENST00000571346 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
PRPF8-202ENST00000571346 MUM1L1Q5H9M0 696 aa16.04■□□□□ 0.16
PRPF8-202ENST00000571346 SLC39A5Q6ZMH5 540 aa16.04■□□□□ 0.16
PRPF8-202ENST00000571346 IQCA1Q86XH1 822 aa16.04■□□□□ 0.16
PRPF8-202ENST00000571346 LBHD1Q9BQE6 289 aaPredicted RBP16.04■□□□□ 0.16
PRPF8-202ENST00000571346 IL25Q9H293 177 aa16.04■□□□□ 0.16
PRPF8-202ENST00000571346 RANBP17Q9H2T7 1088 aaKnown RBP16.04■□□□□ 0.16
PRPF8-202ENST00000571346 FAM184BQ9ULE4 1060 aa16.04■□□□□ 0.16
PRPF8-202ENST00000571346 LCTP09848 1927 aa16.04■□□□□ 0.16
PRPF8-202ENST00000571346 RAD50Q92878 1312 aa16.03■□□□□ 0.16
PRPF8-202ENST00000571346 A0A1W2PQ45 241 aaPredicted RBP16.03■□□□□ 0.16
PRPF8-202ENST00000571346 A0A1W2PQY0 241 aa16.03■□□□□ 0.16
PRPF8-202ENST00000571346 B4E1Z4 1266 aa16.03■□□□□ 0.16
PRPF8-202ENST00000571346 SOX1O00570 391 aaPredicted RBP16.03■□□□□ 0.16
PRPF8-202ENST00000571346 ICAM1P05362 532 aa16.03■□□□□ 0.16
PRPF8-202ENST00000571346 BMP8BP34820 402 aa16.03■□□□□ 0.16
PRPF8-202ENST00000571346 TDHQ8IZJ6 230 aa16.03■□□□□ 0.16
PRPF8-202ENST00000571346 FAM133AQ8N9E0 248 aa16.03■□□□□ 0.16
PRPF8-202ENST00000571346 ABHD16BQ9H3Z7 469 aa16.03■□□□□ 0.16
PRPF8-202ENST00000571346 CTNNA3Q9UI47 895 aa16.03■□□□□ 0.16
PRPF8-202ENST00000571346 PHF24Q9UPV7 400 aa16.03■□□□□ 0.16
PRPF8-202ENST00000571346 ADCY6O43306 1168 aa16.02■□□□□ 0.16
PRPF8-202ENST00000571346 ADAMTS4O75173 837 aa16.02■□□□□ 0.16
PRPF8-202ENST00000571346 GOLGA8HP0CJ92 632 aa16.02■□□□□ 0.16
PRPF8-202ENST00000571346 ZNF543Q08ER8 600 aa16.02■□□□□ 0.16
PRPF8-202ENST00000571346 SNX17Q15036 470 aa16.02■□□□□ 0.16
PRPF8-202ENST00000571346 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
PRPF8-202ENST00000571346 LRCH3Q96II8 777 aa16.02■□□□□ 0.16
PRPF8-202ENST00000571346 TTC14Q96N46 770 aa16.02■□□□□ 0.16
PRPF8-202ENST00000571346 KAT14Q9H8E8 782 aa16.02■□□□□ 0.16
PRPF8-202ENST00000571346 CYP39A1Q9NYL5 469 aa16.02■□□□□ 0.16
PRPF8-202ENST00000571346 DDX49Q9Y6V7 483 aaKnown RBP16.02■□□□□ 0.16
PRPF8-202ENST00000571346 TNKSO95271 1327 aa16.01■□□□□ 0.15
PRPF8-202ENST00000571346 PTPDC1A2A3K4 754 aa16.01■□□□□ 0.15
PRPF8-202ENST00000571346 MYADML2A6NDP7 307 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms