RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 CHD2O14647 1828 aaKnown RBP17.13■□□□□ 0.33
USP43-202ENST00000570475 FAM237AA0A1B0GTK4 181 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 H7C1D1 291 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 USO1O60763 962 aaKnown RBP17.13■□□□□ 0.33
USP43-202ENST00000570475 MB21D1Q8N884 522 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 LRWD1Q9UFC0 647 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 ERVV-1B6SEH8 477 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 TNNI2P48788 182 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 RPS8P62241 208 aaKnown RBP17.13■□□□□ 0.33
USP43-202ENST00000570475 BEND6Q5SZJ8 279 aaPredicted RBP17.13■□□□□ 0.33
USP43-202ENST00000570475 RRAGAQ7L523 313 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 CCDC51Q96ER9 411 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 CALML4Q96GE6 196 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 SLIT3O75094 1523 aa17.13■□□□□ 0.33
USP43-202ENST00000570475 PNPLA7Q6ZV29 1317 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 RNF40O75150 1001 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 PLCG1P19174 1290 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 FOXR1Q6PIV2 292 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 USP17L2Q6R6M4 530 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 CNOT6LQ96LI5 555 aaKnown RBP17.12■□□□□ 0.33
USP43-202ENST00000570475 RASSF4Q9H2L5 321 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 DISC1Q9NRI5 854 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 LCMT1Q9UIC8 334 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 MINPP1Q9UNW1 487 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 NT5DC1Q5TFE4 455 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 SRP68Q9UHB9 627 aaKnown RBP17.12■□□□□ 0.33
USP43-202ENST00000570475 FAM205AQ6ZU69 1335 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 ACTN2P35609 894 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 CDKAL1Q5VV42 579 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 SETDB2Q96T68 719 aa17.12■□□□□ 0.33
USP43-202ENST00000570475 FRMPD2Q68DX3 1309 aaPredicted RBP17.11■□□□□ 0.33
USP43-202ENST00000570475 MARF1Q9Y4F3 1742 aaKnown RBP17.11■□□□□ 0.33
USP43-202ENST00000570475 ATP8B1O43520 1251 aa17.11■□□□□ 0.33
USP43-202ENST00000570475 ZEB2O60315 1214 aa17.11■□□□□ 0.33
USP43-202ENST00000570475 LDHBP07195 334 aaKnown RBP17.11■□□□□ 0.33
USP43-202ENST00000570475 PPP2R5BQ15173 497 aa17.11■□□□□ 0.33
USP43-202ENST00000570475 SMCO2A6NFE2 343 aa17.11■□□□□ 0.33
USP43-202ENST00000570475 KLRF2D3W0D1 207 aa17.11■□□□□ 0.33
USP43-202ENST00000570475 PLEKP08567 350 aaPredicted RBP17.11■□□□□ 0.33
USP43-202ENST00000570475 NELFCDQ8IXH7 590 aa17.11■□□□□ 0.33
USP43-202ENST00000570475 AFAP1L1Q8TED9 768 aa17.11■□□□□ 0.33
USP43-202ENST00000570475 SECISBP2LQ93073 1101 aaKnown RBP17.11■□□□□ 0.33
USP43-202ENST00000570475 MTRQ99707 1265 aa17.11■□□□□ 0.33
USP43-202ENST00000570475 IFIH1Q9BYX4 1025 aaKnown RBP17.11■□□□□ 0.33
USP43-202ENST00000570475 LACRTQ9GZZ8 138 aa17.11■□□□□ 0.33
USP43-202ENST00000570475 NHEJ1Q9H9Q4 299 aaPredicted RBP17.11■□□□□ 0.33
USP43-202ENST00000570475 GPCPD1Q9NPB8 672 aa17.11■□□□□ 0.33
USP43-202ENST00000570475 LRRIQ3A6PVS8 624 aaPredicted RBP17.1■□□□□ 0.33
USP43-202ENST00000570475 MPHOSPH10O00566 681 aaKnown RBP17.1■□□□□ 0.33
USP43-202ENST00000570475 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
USP43-202ENST00000570475 IL17AQ16552 155 aa17.1■□□□□ 0.33
USP43-202ENST00000570475 HAUS4Q9H6D7 363 aa17.1■□□□□ 0.33
USP43-202ENST00000570475 MLXIPQ9HAP2 919 aa17.1■□□□□ 0.33
USP43-202ENST00000570475 EHD2Q9NZN4 543 aa17.1■□□□□ 0.33
USP43-202ENST00000570475 MYO1CO00159 1063 aa17.1■□□□□ 0.33
USP43-202ENST00000570475 MOCS3O95396 460 aa17.1■□□□□ 0.33
USP43-202ENST00000570475 PAFAH1B1P43034 410 aa17.1■□□□□ 0.33
USP43-202ENST00000570475 RIOK1Q9BRS2 568 aaKnown RBP17.1■□□□□ 0.33
USP43-202ENST00000570475 RRP15Q9Y3B9 282 aaKnown RBP17.1■□□□□ 0.33
USP43-202ENST00000570475 CNTNAP5Q8WYK1 1306 aa17.1■□□□□ 0.33
USP43-202ENST00000570475 TACC1O75410 805 aa17.1■□□□□ 0.33
USP43-202ENST00000570475 DDAH1O94760 285 aa17.1■□□□□ 0.33
USP43-202ENST00000570475 TRIM14Q14142 442 aa17.1■□□□□ 0.33
USP43-202ENST00000570475 PFKFB3Q16875 520 aaPredicted RBP17.1■□□□□ 0.33
USP43-202ENST00000570475 AEBP2Q6ZN18 517 aaPredicted RBP17.1■□□□□ 0.33
USP43-202ENST00000570475 PYM1Q9BRP8 204 aaKnown RBP17.1■□□□□ 0.33
USP43-202ENST00000570475 CAMTA1Q9Y6Y1 1673 aa17.1■□□□□ 0.33
USP43-202ENST00000570475 ITPK1Q13572 414 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 TXNRD1Q16881 649 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 KCTD16Q68DU8 428 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 CERS3Q8IU89 383 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 GJA10Q969M2 543 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 EXOC4Q96A65 974 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 NCK2O43639 380 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 LONP1P36776 959 aaKnown RBP17.09■□□□□ 0.33
USP43-202ENST00000570475 STK4Q13043 487 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 IKQ13123 557 aaPredicted RBP17.09■□□□□ 0.33
USP43-202ENST00000570475 TXNRD3Q86VQ6 643 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 PCDHA4Q9UN74 947 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 LAMA4Q16363 1823 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 DNM2P50570 870 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 SF3A3Q12874 501 aaKnown RBP eCLIP17.09■□□□□ 0.33
USP43-202ENST00000570475 GOLGA5Q8TBA6 731 aa17.09■□□□□ 0.33
USP43-202ENST00000570475 CKAP4Q07065 602 aaKnown RBP17.08■□□□□ 0.33
USP43-202ENST00000570475 TRMT1LQ7Z2T5 733 aaKnown RBP17.08■□□□□ 0.33
USP43-202ENST00000570475 LIMA1Q9UHB6 759 aaKnown RBP17.08■□□□□ 0.33
USP43-202ENST00000570475 MAGEA1P43355 309 aa17.08■□□□□ 0.32
USP43-202ENST00000570475 UBE4AQ14139 1066 aa17.08■□□□□ 0.32
USP43-202ENST00000570475 HLTFQ14527 1009 aaKnown RBP eCLIP17.08■□□□□ 0.32
USP43-202ENST00000570475 SPTY2D1Q68D10 685 aaPredicted RBP17.08■□□□□ 0.32
USP43-202ENST00000570475 ANKRD40Q6AI12 368 aa17.08■□□□□ 0.32
USP43-202ENST00000570475 L1RE1Q9UN81 338 aa17.08■□□□□ 0.32
USP43-202ENST00000570475 GOLGA6BA6NDN3 693 aa17.08■□□□□ 0.32
USP43-202ENST00000570475 LGALS16A8MUM7 142 aa17.08■□□□□ 0.32
USP43-202ENST00000570475 TRAF5O00463 557 aa17.08■□□□□ 0.32
USP43-202ENST00000570475 ATP1A2P50993 1020 aa17.08■□□□□ 0.32
USP43-202ENST00000570475 PDXDC2PQ6P474 469 aa17.08■□□□□ 0.32
USP43-202ENST00000570475 APTXQ7Z2E3 356 aaKnown RBP17.08■□□□□ 0.32
USP43-202ENST00000570475 TMC4Q7Z404 712 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms