RNA–Protein interactions for RNA: ENST00000570177.6

TCF4-245, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-245ENST00000570177 MIGA2Q7L4E1 593 aa11.25□□□□□ -0.61
TCF4-245ENST00000570177 ADGRF4Q8IZF3 695 aa11.25□□□□□ -0.61
TCF4-245ENST00000570177 BLIDQ8IZY5 108 aa11.25□□□□□ -0.61
TCF4-245ENST00000570177 FAM177A1Q8N128 213 aaPredicted RBP11.25□□□□□ -0.61
TCF4-245ENST00000570177 BANK1Q8NDB2 785 aa11.25□□□□□ -0.61
TCF4-245ENST00000570177 GMCL1P1Q8NEA9 526 aa11.25□□□□□ -0.61
TCF4-245ENST00000570177 RASGRP4Q8TDF6 673 aa11.25□□□□□ -0.61
TCF4-245ENST00000570177 ACER1Q8TDN7 264 aa11.25□□□□□ -0.61
TCF4-245ENST00000570177 VAT1LQ9HCJ6 419 aa11.25□□□□□ -0.61
TCF4-245ENST00000570177 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.25□□□□□ -0.61
TCF4-245ENST00000570177 PCDHA6Q9UN73 950 aa11.25□□□□□ -0.61
TCF4-245ENST00000570177 PCDHA4Q9UN74 947 aa11.25□□□□□ -0.61
TCF4-245ENST00000570177 PCDHA8Q9Y5H6 950 aa11.25□□□□□ -0.61
TCF4-245ENST00000570177 GJA3Q9Y6H8 435 aa11.25□□□□□ -0.61
TCF4-245ENST00000570177 UQCRHLA0A096LP55 91 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 F5H6K3 240 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 EDIL3O43854 480 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 NDUFB10O96000 172 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 UQCRHP07919 91 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 YBX3P16989 372 aaKnown RBP eCLIP11.24□□□□□ -0.61
TCF4-245ENST00000570177 SLC16A2P36021 539 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 HIRAP54198 1017 aaPredicted RBP11.24□□□□□ -0.61
TCF4-245ENST00000570177 ATP2B2Q01814 1243 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 FAM160A1Q05DH4 1040 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 KLRC3Q07444 240 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 TBC1D10BQ4KMP7 808 aaPredicted RBP11.24□□□□□ -0.61
TCF4-245ENST00000570177 SLFN13Q68D06 897 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 ARHGAP27Q6ZUM4 889 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 KCTD1Q719H9 257 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 HEATR3Q7Z4Q2 680 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 C4orf32Q8N8J7 132 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 MRPS27Q92552 414 aaKnown RBP11.24□□□□□ -0.61
TCF4-245ENST00000570177 RRP36Q96EU6 259 aaKnown RBP11.24□□□□□ -0.61
TCF4-245ENST00000570177 TIGD1Q96MW7 591 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 NUP62CLQ9H1M0 184 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 PRDM16Q9HAZ2 1276 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 SBF1O95248 1867 aa11.24□□□□□ -0.61
TCF4-245ENST00000570177 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 LMNB1P20700 586 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 CALML3P27482 149 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 ECE1P42892 770 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 GABPB1Q06547 395 aaPredicted RBP11.23□□□□□ -0.61
TCF4-245ENST00000570177 GPATCH4Q5T3I0 446 aaKnown RBP11.23□□□□□ -0.61
TCF4-245ENST00000570177 RESP18Q5W5W9 173 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 PIK3AP1Q6ZUJ8 805 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 HOMER1Q86YM7 354 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 TRPM4Q8TD43 1214 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 DCAF4Q8WV16 495 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 GMCL1Q96IK5 515 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 PPP1R9BQ96SB3 815 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 MYCBPQ99417 103 aaPredicted RBP11.23□□□□□ -0.61
TCF4-245ENST00000570177 TRIM34Q9BYJ4 488 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 ZBTB21Q9ULJ3 1066 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 CEP83Q9Y592 693 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 DICER1Q9UPY3 1922 aaKnown RBP11.23□□□□□ -0.61
TCF4-245ENST00000570177 PNMA6FA0A0J9YX94 578 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 ESYT2A0FGR8 921 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 TRIM75PA6NK02 468 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 MYO1BO43795 1136 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 CUTAO60888 179 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 PFKFB1P16118 471 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 ATP2B1P20020 1258 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 CAP2P40123 477 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 KIF4BQ2VIQ3 1234 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 GALNT17Q6IS24 598 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 COA7Q96BR5 231 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 NUP88Q99567 741 aaPredicted RBP11.23□□□□□ -0.61
TCF4-245ENST00000570177 TSPY26PQ9H489 355 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 GPRC5DQ9NZD1 345 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 HACL1Q9UJ83 578 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 SYNPO2Q9UMS6 1093 aa11.23□□□□□ -0.61
TCF4-245ENST00000570177 SRPRBQ9Y5M8 271 aaKnown RBP11.23□□□□□ -0.61
TCF4-245ENST00000570177 EPS15P42566 896 aa11.22□□□□□ -0.61
TCF4-245ENST00000570177 MAP2K1Q02750 393 aaPredicted RBP11.22□□□□□ -0.61
TCF4-245ENST00000570177 ZNF174Q15697 407 aa11.22□□□□□ -0.61
TCF4-245ENST00000570177 IL17AQ16552 155 aa11.22□□□□□ -0.61
TCF4-245ENST00000570177 SASS6Q6UVJ0 657 aa11.22□□□□□ -0.61
TCF4-245ENST00000570177 BTNL9Q6UXG8 535 aa11.22□□□□□ -0.61
TCF4-245ENST00000570177 USP49Q70CQ1 688 aa11.22□□□□□ -0.61
TCF4-245ENST00000570177 CKAP2LQ8IYA6 745 aa11.22□□□□□ -0.61
TCF4-245ENST00000570177 KRI1Q8N9T8 703 aaKnown RBP11.22□□□□□ -0.61
TCF4-245ENST00000570177 GLIS2Q9BZE0 524 aaPredicted RBP11.22□□□□□ -0.61
TCF4-245ENST00000570177 TMX2Q9Y320 296 aa11.22□□□□□ -0.61
TCF4-245ENST00000570177 SMCO2A6NFE2 343 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 ZNF202O95125 648 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 SLC1A4P43007 532 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 TRAPPC10P48553 1259 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 CCDC173Q0VFZ6 552 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 MAP3K11Q16584 847 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 CCDC96Q2M329 555 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 TTC38Q5R3I4 469 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 CCDC84Q86UT8 332 aaPredicted RBP11.21□□□□□ -0.61
TCF4-245ENST00000570177 CREBRFQ8IUR6 639 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 GPC2Q8N158 579 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 ZNF579Q8NAF0 562 aaKnown RBP11.21□□□□□ -0.61
TCF4-245ENST00000570177 NCAPGQ9BPX3 1015 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 TNMDQ9H2S6 317 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 BRMS1Q9HCU9 246 aa11.21□□□□□ -0.61
TCF4-245ENST00000570177 hCG_1984214I3L0E3 225 aa11.21□□□□□ -0.62
TCF4-245ENST00000570177 ZBTB5O15062 677 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms