RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 C1orf141Q5JVX7 400 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 ALYREFQ86V81 257 aaKnown RBP7.49□□□□□ -1.21
GDE1-204ENST00000569773 GPBAR1Q8TDU6 330 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 LENG1Q96BZ8 264 aaPredicted RBP7.49□□□□□ -1.21
GDE1-204ENST00000569773 WDR89Q96FK6 387 aaPredicted RBP7.49□□□□□ -1.21
GDE1-204ENST00000569773 NACC1Q96RE7 527 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 SRP68Q9UHB9 627 aaKnown RBP7.49□□□□□ -1.21
GDE1-204ENST00000569773 DDX41Q9UJV9 622 aaKnown RBP7.49□□□□□ -1.21
GDE1-204ENST00000569773 TIAM2Q8IVF5 1701 aa7.49□□□□□ -1.21
GDE1-204ENST00000569773 SOS1Q07889 1333 aaPredicted RBP7.49□□□□□ -1.21
GDE1-204ENST00000569773 KRBA1A5PL33 1030 aa7.48□□□□□ -1.21
GDE1-204ENST00000569773 C9orf172C9J069 976 aa7.48□□□□□ -1.21
GDE1-204ENST00000569773 F8W735 103 aaPredicted RBP7.48□□□□□ -1.21
GDE1-204ENST00000569773 ZNF862O60290 1169 aa7.48□□□□□ -1.21
GDE1-204ENST00000569773 CYP19A1P11511 503 aaPredicted RBP7.48□□□□□ -1.21
GDE1-204ENST00000569773 RFC4P35249 363 aa7.48□□□□□ -1.21
GDE1-204ENST00000569773 PTPN11Q06124 597 aaPredicted RBP7.48□□□□□ -1.21
GDE1-204ENST00000569773 CAMK2GQ13555 558 aaPredicted RBP7.48□□□□□ -1.21
GDE1-204ENST00000569773 MTHFSDQ2M296 383 aaKnown RBP7.48□□□□□ -1.21
GDE1-204ENST00000569773 EXOSC6Q5RKV6 272 aaKnown RBP7.48□□□□□ -1.21
GDE1-204ENST00000569773 HP1BP3Q5SSJ5 553 aaPredicted RBP7.48□□□□□ -1.21
GDE1-204ENST00000569773 DNAJC10Q8IXB1 793 aa7.48□□□□□ -1.21
GDE1-204ENST00000569773 DNAJC5GQ8N7S2 189 aa7.48□□□□□ -1.21
GDE1-204ENST00000569773 GAL3ST3Q96A11 431 aa7.48□□□□□ -1.21
GDE1-204ENST00000569773 WDR90Q96KV7 1748 aa7.48□□□□□ -1.21
GDE1-204ENST00000569773 RNF208Q9H0X6 261 aa7.48□□□□□ -1.21
GDE1-204ENST00000569773 MIR1-1HGQ9H1L0 117 aa7.48□□□□□ -1.21
GDE1-204ENST00000569773 KRT82Q9NSB4 513 aa7.48□□□□□ -1.21
GDE1-204ENST00000569773 POLRMTO00411 1230 aaKnown RBP7.47□□□□□ -1.21
GDE1-204ENST00000569773 HMOX1P09601 288 aa7.47□□□□□ -1.21
GDE1-204ENST00000569773 EIF4A3P38919 411 aaKnown RBP7.47□□□□□ -1.21
GDE1-204ENST00000569773 NRG1Q02297 640 aaPredicted RBP7.47□□□□□ -1.21
GDE1-204ENST00000569773 LMNB2Q03252 620 aa7.47□□□□□ -1.21
GDE1-204ENST00000569773 SLC39A6Q13433 755 aa7.47□□□□□ -1.21
GDE1-204ENST00000569773 TRIM42Q8IWZ5 723 aa7.47□□□□□ -1.21
GDE1-204ENST00000569773 TMEM130Q8N3G9 435 aa7.47□□□□□ -1.21
GDE1-204ENST00000569773 JARID2Q92833 1246 aaPredicted RBP7.47□□□□□ -1.21
GDE1-204ENST00000569773 WDR18Q9BV38 432 aa7.47□□□□□ -1.21
GDE1-204ENST00000569773 TMPRSS13Q9BYE2 586 aa7.47□□□□□ -1.21
GDE1-204ENST00000569773 AKTIPQ9H8T0 292 aa7.47□□□□□ -1.21
GDE1-204ENST00000569773 RAD18Q9NS91 495 aa7.47□□□□□ -1.21
GDE1-204ENST00000569773 CACNA2D2Q9NY47 1150 aa7.47□□□□□ -1.21
GDE1-204ENST00000569773 ADAMTS1Q9UHI8 967 aa7.47□□□□□ -1.21
GDE1-204ENST00000569773 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.47□□□□□ -1.21
GDE1-204ENST00000569773 COL15A1P39059 1388 aa7.46□□□□□ -1.21
GDE1-204ENST00000569773 CEMIPQ8WUJ3 1361 aa7.46□□□□□ -1.21
GDE1-204ENST00000569773 MSTNO14793 375 aa7.46□□□□□ -1.22
GDE1-204ENST00000569773 DIAPH1O60610 1272 aaKnown RBP7.46□□□□□ -1.22
GDE1-204ENST00000569773 AOC2O75106 756 aa7.46□□□□□ -1.22
GDE1-204ENST00000569773 GARTP22102 1010 aa7.46□□□□□ -1.22
GDE1-204ENST00000569773 CHRNA4P43681 627 aa7.46□□□□□ -1.22
GDE1-204ENST00000569773 IREB2P48200 963 aaKnown RBP7.46□□□□□ -1.22
GDE1-204ENST00000569773 MBTPS1Q14703 1052 aa7.46□□□□□ -1.22
GDE1-204ENST00000569773 SNAP47Q5SQN1 464 aa7.46□□□□□ -1.22
GDE1-204ENST00000569773 FBXL19Q6PCT2 694 aa7.46□□□□□ -1.22
GDE1-204ENST00000569773 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.46□□□□□ -1.22
GDE1-204ENST00000569773 BNC2Q6ZN30 1099 aaPredicted RBP7.46□□□□□ -1.22
GDE1-204ENST00000569773 ZNF654Q8IZM8 581 aa7.46□□□□□ -1.22
GDE1-204ENST00000569773 GOLM1Q8NBJ4 401 aa7.46□□□□□ -1.22
GDE1-204ENST00000569773 ZNF526Q8TF50 670 aaPredicted RBP7.46□□□□□ -1.22
GDE1-204ENST00000569773 TGIF2Q9GZN2 237 aa7.46□□□□□ -1.22
GDE1-204ENST00000569773 LAMB4A4D0S4 1761 aa7.46□□□□□ -1.22
GDE1-204ENST00000569773 SLX4Q8IY92 1834 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 MEGF11A6BM72 1044 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 NOS3P29474 1203 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 HTRA3P83110 453 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 ADGRE1Q14246 886 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 KIF4BQ2VIQ3 1234 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 CC2D1BQ5T0F9 858 aaKnown RBP7.45□□□□□ -1.22
GDE1-204ENST00000569773 IL17REQ8NFR9 667 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 ZNF296Q8WUU4 475 aaPredicted RBP7.45□□□□□ -1.22
GDE1-204ENST00000569773 WFDC12Q8WWY7 111 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 SPON2Q9BUD6 331 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 ACBD3Q9H3P7 528 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 CCSER2Q9H7U1 834 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 CYP4F12Q9HCS2 524 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 NARFQ9UHQ1 456 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 PCDHA4Q9UN74 947 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 ZBTB1Q9Y2K1 713 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 KDM3BQ7LBC6 1761 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 CARMIL3Q8ND23 1372 aa7.45□□□□□ -1.22
GDE1-204ENST00000569773 NUP98P52948 1817 aa7.44□□□□□ -1.22
GDE1-204ENST00000569773 F13A1P00488 732 aa7.44□□□□□ -1.22
GDE1-204ENST00000569773 GLB1P16278 677 aa7.44□□□□□ -1.22
GDE1-204ENST00000569773 CHRNA5P30532 468 aa7.44□□□□□ -1.22
GDE1-204ENST00000569773 EIF5P55010 431 aaKnown RBP7.44□□□□□ -1.22
GDE1-204ENST00000569773 HNRNPUQ00839 825 aaKnown RBP eCLIP7.44□□□□□ -1.22
GDE1-204ENST00000569773 NFIXQ14938 502 aa7.44□□□□□ -1.22
GDE1-204ENST00000569773 SCARA3Q6AZY7 606 aa7.44□□□□□ -1.22
GDE1-204ENST00000569773 FDX2Q6P4F2 183 aa7.44□□□□□ -1.22
GDE1-204ENST00000569773 CD163Q86VB7 1156 aa7.44□□□□□ -1.22
GDE1-204ENST00000569773 KIAA0825Q8IV33 1275 aa7.44□□□□□ -1.22
GDE1-204ENST00000569773 SMG8Q8ND04 991 aaKnown RBP7.44□□□□□ -1.22
GDE1-204ENST00000569773 PIM2Q9P1W9 311 aa7.44□□□□□ -1.22
GDE1-204ENST00000569773 SUPT16HQ9Y5B9 1047 aaKnown RBP7.44□□□□□ -1.22
GDE1-204ENST00000569773 HEG1Q9ULI3 1381 aa7.44□□□□□ -1.22
GDE1-204ENST00000569773 C1QTNF9BB2RNN3 333 aa7.43□□□□□ -1.22
GDE1-204ENST00000569773 SLFN14P0C7P3 912 aa7.43□□□□□ -1.22
GDE1-204ENST00000569773 ADH5P11766 374 aa7.43□□□□□ -1.22
GDE1-204ENST00000569773 DRD2P14416 443 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms