RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 TMEM259Q4ZIN3 620 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 STRIP1Q5VSL9 837 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 CDC42EP5Q6NZY7 148 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 OLFM4Q6UX06 510 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 C2CD5Q86YS7 1000 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 AOPEPQ8N6M6 819 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 ZNF713Q8N859 430 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-213ENST00000569687 IQUBQ8NA54 791 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 SLC44A5Q8NCS7 719 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 CCDC148Q8NFR7 591 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 CCDC12Q8WUD4 166 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-213ENST00000569687 CNKSR1Q969H4 720 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 MKL1Q969V6 931 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 PAGE5Q96GU1 130 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 CCDC17Q96LX7 622 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 GSDMAQ96QA5 445 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 IDI2Q9BXS1 227 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 ZMYND12Q9H0C1 365 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 EHD4Q9H223 541 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 HSD3B7Q9H2F3 369 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 USP40Q9NVE5 1235 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 CLIP2Q9UDT6 1046 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 LIMD1Q9UGP4 676 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 SERTAD1Q9UHV2 236 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 DACH1Q9UI36 760 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 MAN1B1Q9UKM7 699 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 PCDHA6Q9UN73 950 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 TTF2Q9UNY4 1162 aaKnown RBP6.13□□□□□ -1.43
SF3B3-213ENST00000569687 MTMR7Q9Y216 660 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 PCDHGA10Q9Y5H3 936 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 PCDHA8Q9Y5H6 950 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 BAZ2AQ9UIF9 1905 aaKnown RBP6.13□□□□□ -1.43
SF3B3-213ENST00000569687 MYH13Q9UKX3 1938 aa6.13□□□□□ -1.43
SF3B3-213ENST00000569687 FAM205CA6NFA0 338 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 ATMINO43313 823 aaPredicted RBP6.12□□□□□ -1.43
SF3B3-213ENST00000569687 ATP2B1P20020 1258 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 PTGS1P23219 599 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 GNA11P29992 359 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 PRPHP41219 470 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 GSDMDP57764 484 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 FANCCQ00597 558 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 MYL5Q02045 173 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 IL17AQ16552 155 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 DACT2Q5SW24 774 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 PPP2R2DQ66LE6 453 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 WWC2Q6AWC2 1192 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 TYW1BQ6NUM6 668 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 PIK3AP1Q6ZUJ8 805 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 USP49Q70CQ1 688 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 KRT25Q7Z3Z0 450 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 LRRC8AQ8IWT6 810 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 DRC7Q8IY82 874 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 SPC24Q8NBT2 197 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 MTMR14Q8NCE2 650 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 SLAIN1Q8ND83 568 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 SUPT20HQ8NEM7 779 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 PXYLP1Q8TE99 480 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 CACTINQ8WUQ7 758 aaKnown RBP6.12□□□□□ -1.43
SF3B3-213ENST00000569687 ERCC4Q92889 916 aaPredicted RBP6.12□□□□□ -1.43
SF3B3-213ENST00000569687 SMARCE1Q969G3 411 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 TEKT1Q969V4 418 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 CEP95Q96GE4 821 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 EPSTI1Q96J88 318 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 CALR3Q96L12 384 aaKnown RBP6.12□□□□□ -1.43
SF3B3-213ENST00000569687 CCSER1Q9C0I3 900 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 DHX36Q9H2U1 1008 aaKnown RBP6.12□□□□□ -1.43
SF3B3-213ENST00000569687 NRBP1Q9UHY1 535 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 SERPINB13Q9UIV8 391 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 STX8Q9UNK0 236 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 ADGRG1Q9Y653 693 aa6.12□□□□□ -1.43
SF3B3-213ENST00000569687 SNED1Q8TER0 1413 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 A0A087WWV3 80 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 A0A087X0B3 334 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 CCDC194A0A1B0GVG4 234 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 USP17L5A8MUK1 530 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 BIN1O00499 593 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 WNT7AO00755 349 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 ADAMTS3O15072 1205 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 FOXN1O15353 648 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 CBFA2T2O43439 604 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 ZBTB7AO95365 584 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 TTLL1O95922 423 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 MYL1P05976 194 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 PDHBP11177 359 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 ZNF18P17022 549 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 SHMT1P34896 483 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 ABL2P42684 1182 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 CRKP46108 304 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 KCNJ6P48051 423 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 DPYDQ12882 1025 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 DOK7Q18PE1 504 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 CCDC144BQ3MJ40 725 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 ASPRV1Q53RT3 343 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 NOM1Q5C9Z4 860 aaKnown RBP6.11□□□□□ -1.43
SF3B3-213ENST00000569687 SPECC1Q5M775 1068 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 PDXDC2PQ6P474 469 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 PADI6Q6TGC4 694 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 TEX2Q8IWB9 1127 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 SYMPKQ92797 1274 aaKnown RBP6.11□□□□□ -1.43
SF3B3-213ENST00000569687 ZNF622Q969S3 477 aaKnown RBP eCLIP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms