RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 COL6A1P12109 1028 aa29.73■■■□□ 2.35
CCNF-205ENST00000569093 BTNL9Q6UXG8 535 aa29.73■■■□□ 2.35
CCNF-205ENST00000569093 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.73■■■□□ 2.35
CCNF-205ENST00000569093 DGKHQ86XP1 1220 aa29.73■■■□□ 2.35
CCNF-205ENST00000569093 NR2E3Q9Y5X4 410 aa29.73■■■□□ 2.35
CCNF-205ENST00000569093 SGSM2O43147 1006 aa29.72■■■□□ 2.35
CCNF-205ENST00000569093 ALAS1P13196 640 aa29.72■■■□□ 2.35
CCNF-205ENST00000569093 SYDE2Q5VT97 1194 aa29.72■■■□□ 2.35
CCNF-205ENST00000569093 IQCA1Q86XH1 822 aa29.72■■■□□ 2.35
CCNF-205ENST00000569093 TRERF1Q96PN7 1200 aa29.72■■■□□ 2.35
CCNF-205ENST00000569093 RNF146Q9NTX7 359 aa29.72■■■□□ 2.35
CCNF-205ENST00000569093 ZSCAN10Q96SZ4 725 aaPredicted RBP29.71■■■□□ 2.35
CCNF-205ENST00000569093 KRT23Q9C075 422 aa29.71■■■□□ 2.35
CCNF-205ENST00000569093 ACAD9Q9H845 621 aa29.71■■■□□ 2.35
CCNF-205ENST00000569093 SNHG28P0DPA3 235 aa29.7■■■□□ 2.35
CCNF-205ENST00000569093 ZNF543Q08ER8 600 aa29.7■■■□□ 2.35
CCNF-205ENST00000569093 GJC2Q5T442 439 aaPredicted RBP29.7■■■□□ 2.35
CCNF-205ENST00000569093 CENPQQ7L2Z9 268 aaPredicted RBP29.7■■■□□ 2.35
CCNF-205ENST00000569093 FGD4Q96M96 766 aa29.7■■■□□ 2.35
CCNF-205ENST00000569093 RANBP17Q9H2T7 1088 aaKnown RBP29.7■■■□□ 2.35
CCNF-205ENST00000569093 COLQQ9Y215 455 aaPredicted RBP29.7■■■□□ 2.35
CCNF-205ENST00000569093 SNAI1O95863 264 aaPredicted RBP29.69■■■□□ 2.34
CCNF-205ENST00000569093 ZNF865P0CJ78 1059 aaPredicted RBP29.69■■■□□ 2.34
CCNF-205ENST00000569093 GOLGA8HP0CJ92 632 aa29.69■■■□□ 2.34
CCNF-205ENST00000569093 NT5C2P49902 561 aa29.69■■■□□ 2.34
CCNF-205ENST00000569093 CNTN2Q02246 1040 aa29.69■■■□□ 2.34
CCNF-205ENST00000569093 TKFCQ3LXA3 575 aa29.69■■■□□ 2.34
CCNF-205ENST00000569093 CCDC178Q5BJE1 867 aa29.69■■■□□ 2.34
CCNF-205ENST00000569093 MUM1L1Q5H9M0 696 aa29.69■■■□□ 2.34
CCNF-205ENST00000569093 ENAHQ8N8S7 591 aaPredicted RBP29.69■■■□□ 2.34
CCNF-205ENST00000569093 ANKS1AQ92625 1134 aa29.69■■■□□ 2.34
CCNF-205ENST00000569093 CNNM2Q9H8M5 875 aa29.69■■■□□ 2.34
CCNF-205ENST00000569093 A1CFQ9NQ94 594 aaKnown RBP29.69■■■□□ 2.34
CCNF-205ENST00000569093 NRBP1Q9UHY1 535 aa29.69■■■□□ 2.34
CCNF-205ENST00000569093 CCPG1Q9ULG6 757 aa29.69■■■□□ 2.34
CCNF-205ENST00000569093 CYP21A2P08686 494 aa29.68■■■□□ 2.34
CCNF-205ENST00000569093 MAMDC4Q6UXC1 1216 aa29.68■■■□□ 2.34
CCNF-205ENST00000569093 C7orf61Q8IZ16 206 aa29.68■■■□□ 2.34
CCNF-205ENST00000569093 PNMA1Q8ND90 353 aa29.68■■■□□ 2.34
CCNF-205ENST00000569093 SENP6Q9GZR1 1112 aaPredicted RBP29.68■■■□□ 2.34
CCNF-205ENST00000569093 TAF6LQ9Y6J9 622 aa29.68■■■□□ 2.34
CCNF-205ENST00000569093 TNKSO95271 1327 aa29.68■■■□□ 2.34
CCNF-205ENST00000569093 MCM3APO60318 1980 aa29.67■■■□□ 2.34
CCNF-205ENST00000569093 MYCNP04198 464 aaPredicted RBP29.67■■■□□ 2.34
CCNF-205ENST00000569093 ICAM1P05362 532 aa29.67■■■□□ 2.34
CCNF-205ENST00000569093 CYB5R4Q7L1T6 521 aa29.67■■■□□ 2.34
CCNF-205ENST00000569093 CPVLQ9H3G5 476 aa29.67■■■□□ 2.34
CCNF-205ENST00000569093 KAT14Q9H8E8 782 aa29.67■■■□□ 2.34
CCNF-205ENST00000569093 U3KPZ7 1027 aaPredicted RBP29.67■■■□□ 2.34
CCNF-205ENST00000569093 POTEB2H3BUK9 544 aa29.66■■■□□ 2.34
CCNF-205ENST00000569093 DNM1LO00429 736 aa29.66■■■□□ 2.34
CCNF-205ENST00000569093 HABP4Q5JVS0 413 aaKnown RBP29.66■■■□□ 2.34
CCNF-205ENST00000569093 CHRDL2Q6WN34 429 aa29.66■■■□□ 2.34
CCNF-205ENST00000569093 ZNF467Q7Z7K2 595 aaPredicted RBP29.66■■■□□ 2.34
CCNF-205ENST00000569093 MSL3Q8N5Y2 521 aaKnown RBP29.66■■■□□ 2.34
CCNF-205ENST00000569093 ARRDC4Q8NCT1 418 aa29.66■■■□□ 2.34
CCNF-205ENST00000569093 CNPY2Q9Y2B0 182 aa29.66■■■□□ 2.34
CCNF-205ENST00000569093 SYNGAP1Q96PV0 1343 aa29.66■■■□□ 2.34
CCNF-205ENST00000569093 LRRC26Q2I0M4 334 aa29.65■■■□□ 2.34
CCNF-205ENST00000569093 FAM133AQ8N9E0 248 aa29.65■■■□□ 2.34
CCNF-205ENST00000569093 UBAC1Q9BSL1 405 aa29.65■■■□□ 2.34
CCNF-205ENST00000569093 UBA5Q9GZZ9 404 aa29.65■■■□□ 2.34
CCNF-205ENST00000569093 SOWAHBA6NEL2 793 aa29.64■■■□□ 2.34
CCNF-205ENST00000569093 MAP4K1Q92918 833 aa29.64■■■□□ 2.34
CCNF-205ENST00000569093 LENG1Q96BZ8 264 aaPredicted RBP29.64■■■□□ 2.34
CCNF-205ENST00000569093 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.64■■■□□ 2.34
CCNF-205ENST00000569093 DNAH12Q6ZR08 3092 aa29.64■■■□□ 2.34
CCNF-205ENST00000569093 XPNPEP3Q9NQH7 507 aa29.63■■■□□ 2.33
CCNF-205ENST00000569093 ZHX1Q9UKY1 873 aaPredicted RBP29.63■■■□□ 2.33
CCNF-205ENST00000569093 ZMYND8Q9ULU4 1186 aaPredicted RBP29.63■■■□□ 2.33
CCNF-205ENST00000569093 RARBP10826 455 aa29.62■■■□□ 2.33
CCNF-205ENST00000569093 ATN1P54259 1190 aaPredicted RBP29.62■■■□□ 2.33
CCNF-205ENST00000569093 TRDNQ13061 729 aa29.62■■■□□ 2.33
CCNF-205ENST00000569093 LRRC41Q15345 812 aa29.62■■■□□ 2.33
CCNF-205ENST00000569093 GPATCH4Q5T3I0 446 aaKnown RBP29.62■■■□□ 2.33
CCNF-205ENST00000569093 NSMFQ6X4W1 530 aa29.62■■■□□ 2.33
CCNF-205ENST00000569093 ARMCX2Q7L311 632 aa29.62■■■□□ 2.33
CCNF-205ENST00000569093 CCDC144CPQ8IYA2 1237 aa29.62■■■□□ 2.33
CCNF-205ENST00000569093 PURBQ96QR8 312 aaKnown RBP29.62■■■□□ 2.33
CCNF-205ENST00000569093 CYP39A1Q9NYL5 469 aa29.62■■■□□ 2.33
CCNF-205ENST00000569093 E7EWF7 191 aa29.61■■■□□ 2.33
CCNF-205ENST00000569093 PGK1P00558 417 aa29.61■■■□□ 2.33
CCNF-205ENST00000569093 AKR1A1P14550 325 aa29.61■■■□□ 2.33
CCNF-205ENST00000569093 ACVR2BQ13705 512 aa29.61■■■□□ 2.33
CCNF-205ENST00000569093 SEC23AQ15436 765 aa29.61■■■□□ 2.33
CCNF-205ENST00000569093 STOX1Q6ZVD7 989 aa29.61■■■□□ 2.33
CCNF-205ENST00000569093 PCDH10Q9P2E7 1040 aa29.61■■■□□ 2.33
CCNF-205ENST00000569093 RBM8AQ9Y5S9 174 aaKnown RBP29.61■■■□□ 2.33
CCNF-205ENST00000569093 DDX49Q9Y6V7 483 aaKnown RBP29.61■■■□□ 2.33
CCNF-205ENST00000569093 KBTBD13C9JR72 458 aa29.6■■■□□ 2.33
CCNF-205ENST00000569093 NFIBO00712 420 aa29.6■■■□□ 2.33
CCNF-205ENST00000569093 SYN1P17600 705 aa29.6■■■□□ 2.33
CCNF-205ENST00000569093 IFIT1BQ5T764 474 aaKnown RBP29.6■■■□□ 2.33
CCNF-205ENST00000569093 ESYT1Q9BSJ8 1104 aa29.6■■■□□ 2.33
CCNF-205ENST00000569093 FAM184BQ9ULE4 1060 aa29.6■■■□□ 2.33
CCNF-205ENST00000569093 ASTN1O14525 1302 aa29.6■■■□□ 2.33
CCNF-205ENST00000569093 ADCYAP1R1P41586 468 aa29.59■■■□□ 2.33
CCNF-205ENST00000569093 ABHD16BQ9H3Z7 469 aa29.59■■■□□ 2.33
CCNF-205ENST00000569093 RBM27Q9P2N5 1060 aaKnown RBP29.59■■■□□ 2.33
CCNF-205ENST00000569093 LCTP09848 1927 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms