RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 TTC6Q86TZ1 520 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 SCLYQ96I15 445 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 PHOX2BQ99453 314 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 RIOK1Q9BRS2 568 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 TRPV6Q9H1D0 765 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 TMX2Q9Y320 296 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 RIPK3Q9Y572 518 aa14.35□□□□□ -0.11
VPS9D1-207ENST00000568691 VWA5AO00534 786 aa14.34□□□□□ -0.11
VPS9D1-207ENST00000568691 CYP2D6P10635 497 aa14.34□□□□□ -0.11
VPS9D1-207ENST00000568691 STAT3P40763 770 aa14.34□□□□□ -0.11
VPS9D1-207ENST00000568691 ACVR2BQ13705 512 aa14.34□□□□□ -0.11
VPS9D1-207ENST00000568691 CCDC144BQ3MJ40 725 aa14.34□□□□□ -0.11
VPS9D1-207ENST00000568691 GNASQ5JWF2 1037 aa14.34□□□□□ -0.11
VPS9D1-207ENST00000568691 PCSK9Q8NBP7 692 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-207ENST00000568691 VTI1AQ96AJ9 217 aa14.34□□□□□ -0.11
VPS9D1-207ENST00000568691 MTIF3Q9H2K0 278 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-207ENST00000568691 VCPKMTQ9H867 229 aa14.34□□□□□ -0.11
VPS9D1-207ENST00000568691 TLR7Q9NYK1 1049 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-207ENST00000568691 ZNF318Q5VUA4 2279 aa14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 TLR3O15455 904 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 GTPBP6O43824 516 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 B4GALT4O60513 344 aa14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 AKR1B1P15121 316 aa14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 TNNI3KQ59H18 835 aa14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 TTC39AQ5SRH9 613 aa14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 CXCL17Q6UXB2 119 aa14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 FAM178BQ8IXR5 827 aa14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 MSL3Q8N5Y2 521 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 ARNTL2Q8WYA1 636 aa14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 ZNF512BQ96KM6 892 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 ANTXR1Q9H6X2 564 aa14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 C1orf115Q9H7X2 142 aa14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 FPGT-TNNI3KV9GXZ4 949 aa14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 CFAP54Q96N23 3096 aa14.33□□□□□ -0.12
VPS9D1-207ENST00000568691 MPHOSPH10O00566 681 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-207ENST00000568691 WDR46O15213 610 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-207ENST00000568691 TMEM67Q5HYA8 995 aa14.32□□□□□ -0.12
VPS9D1-207ENST00000568691 SIRT2Q8IXJ6 389 aa14.32□□□□□ -0.12
VPS9D1-207ENST00000568691 MAGEB6Q8N7X4 407 aa14.32□□□□□ -0.12
VPS9D1-207ENST00000568691 DYNLL2Q96FJ2 89 aa14.32□□□□□ -0.12
VPS9D1-207ENST00000568691 PPP1R9AQ9ULJ8 1098 aa14.32□□□□□ -0.12
VPS9D1-207ENST00000568691 CACNA1AO00555 2505 aa14.32□□□□□ -0.12
VPS9D1-207ENST00000568691 TRIOO75962 3097 aa14.31□□□□□ -0.12
VPS9D1-207ENST00000568691 ZBBXA8MT70 800 aa14.31□□□□□ -0.12
VPS9D1-207ENST00000568691 NUCB1Q02818 461 aa14.31□□□□□ -0.12
VPS9D1-207ENST00000568691 TMEM63BQ5T3F8 832 aa14.31□□□□□ -0.12
VPS9D1-207ENST00000568691 TMEM179Q6ZVK1 233 aa14.31□□□□□ -0.12
VPS9D1-207ENST00000568691 GJD3Q8N144 294 aa14.31□□□□□ -0.12
VPS9D1-207ENST00000568691 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.31□□□□□ -0.12
VPS9D1-207ENST00000568691 DCTPP1Q9H773 170 aa14.31□□□□□ -0.12
VPS9D1-207ENST00000568691 GPR108Q9NPR9 543 aa14.31□□□□□ -0.12
VPS9D1-207ENST00000568691 DBNLQ9UJU6 430 aaKnown RBP14.31□□□□□ -0.12
VPS9D1-207ENST00000568691 COL4A4P53420 1690 aaPredicted RBP14.3□□□□□ -0.12
VPS9D1-207ENST00000568691 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.3□□□□□ -0.12
VPS9D1-207ENST00000568691 IGSF3O75054 1194 aa14.3□□□□□ -0.12
VPS9D1-207ENST00000568691 IDH1O75874 414 aaKnown RBP14.3□□□□□ -0.12
VPS9D1-207ENST00000568691 IL9P15248 144 aa14.3□□□□□ -0.12
VPS9D1-207ENST00000568691 ITGA7Q13683 1181 aa14.3□□□□□ -0.12
VPS9D1-207ENST00000568691 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
VPS9D1-207ENST00000568691 GNEQ9Y223 722 aaKnown RBP14.3□□□□□ -0.12
VPS9D1-207ENST00000568691 DDX49Q9Y6V7 483 aaKnown RBP14.3□□□□□ -0.12
VPS9D1-207ENST00000568691 MCM3APO60318 1980 aa14.3□□□□□ -0.12
VPS9D1-207ENST00000568691 POTEB3A0JP26 581 aa14.29□□□□□ -0.12
VPS9D1-207ENST00000568691 LCHNA4D1U4 455 aa14.29□□□□□ -0.12
VPS9D1-207ENST00000568691 POLR3DP05423 398 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-207ENST00000568691 PSMC6P62333 389 aa14.29□□□□□ -0.12
VPS9D1-207ENST00000568691 ICA1Q05084 483 aa14.29□□□□□ -0.12
VPS9D1-207ENST00000568691 POTEBQ6S5H4 581 aa14.29□□□□□ -0.12
VPS9D1-207ENST00000568691 ARMCX2Q7L311 632 aa14.29□□□□□ -0.12
VPS9D1-207ENST00000568691 UIMC1Q96RL1 719 aa14.29□□□□□ -0.12
VPS9D1-207ENST00000568691 ATP8B2P98198 1209 aa14.28□□□□□ -0.12
VPS9D1-207ENST00000568691 G3BP1Q13283 466 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS9D1-207ENST00000568691 SCN5AQ14524 2016 aa14.28□□□□□ -0.12
VPS9D1-207ENST00000568691 CCDC158Q5M9N0 1113 aa14.28□□□□□ -0.12
VPS9D1-207ENST00000568691 FAM83BQ5T0W9 1011 aa14.28□□□□□ -0.12
VPS9D1-207ENST00000568691 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS9D1-207ENST00000568691 RPUSD2Q8IZ73 545 aaKnown RBP14.28□□□□□ -0.12
VPS9D1-207ENST00000568691 GDPD5Q8WTR4 605 aa14.28□□□□□ -0.12
VPS9D1-207ENST00000568691 ABHD16BQ9H3Z7 469 aa14.28□□□□□ -0.12
VPS9D1-207ENST00000568691 UBE2ZQ9H832 354 aaPredicted RBP14.28□□□□□ -0.12
VPS9D1-207ENST00000568691 TSHZ2Q9NRE2 1034 aa14.28□□□□□ -0.12
VPS9D1-207ENST00000568691 NAV1Q8NEY1 1877 aa14.27□□□□□ -0.12
VPS9D1-207ENST00000568691 CYP2C9P11712 490 aa14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 EEF2P13639 858 aaKnown RBP14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 LEXMQ3ZCV2 418 aa14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 SNRNP48Q6IEG0 339 aaKnown RBP14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 DEFB128Q7Z7B8 93 aa14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 CHD1LQ86WJ1 897 aa14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 HERC6Q8IVU3 1022 aa14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 CCDC144CPQ8IYA2 1237 aa14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 SSH3Q8TE77 659 aa14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 SDR42E1Q8WUS8 393 aa14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 NUP88Q99567 741 aaPredicted RBP14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 ARHGEF10LQ9HCE6 1279 aa14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 DCP1AQ9NPI6 582 aaPredicted RBP14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 TRMT13Q9NUP7 481 aaKnown RBP14.27□□□□□ -0.13
VPS9D1-207ENST00000568691 MCM9Q9NXL9 1143 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms