RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 TMEM232C9JQI7 657 aa18.47■□□□□ 0.55
NME3-211ENST00000568561 DUSP11O75319 330 aaKnown RBP18.47■□□□□ 0.55
NME3-211ENST00000568561 TFAP4Q01664 338 aa18.47■□□□□ 0.55
NME3-211ENST00000568561 CNTN2Q02246 1040 aa18.47■□□□□ 0.55
NME3-211ENST00000568561 CCDC144BQ3MJ40 725 aa18.47■□□□□ 0.55
NME3-211ENST00000568561 CCDC129Q6ZRS4 1044 aa18.47■□□□□ 0.55
NME3-211ENST00000568561 ANKRD33Q7Z3H0 272 aa18.47■□□□□ 0.55
NME3-211ENST00000568561 ZNF467Q7Z7K2 595 aaPredicted RBP18.47■□□□□ 0.55
NME3-211ENST00000568561 NEDD1Q8NHV4 660 aa18.47■□□□□ 0.55
NME3-211ENST00000568561 MAFAQ8NHW3 353 aaPredicted RBP18.47■□□□□ 0.55
NME3-211ENST00000568561 NACAP1Q9BZK3 213 aa18.47■□□□□ 0.55
NME3-211ENST00000568561 NAPBQ9H115 298 aa18.47■□□□□ 0.55
NME3-211ENST00000568561 PCDHB15Q9Y5E8 787 aa18.47■□□□□ 0.55
NME3-211ENST00000568561 DDX49Q9Y6V7 483 aaKnown RBP18.47■□□□□ 0.55
NME3-211ENST00000568561 MOXD2PA6NHM9 499 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 DCDC2CA8MYV0 355 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 ASGR1P07306 291 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 SNAP25P60880 206 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 PDE4BQ07343 736 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 PPARAQ07869 468 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 IKQ13123 557 aaPredicted RBP18.46■□□□□ 0.55
NME3-211ENST00000568561 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.46■□□□□ 0.55
NME3-211ENST00000568561 CCDC144CPQ8IYA2 1237 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 CHST13Q8NET6 341 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 NUP133Q8WUM0 1156 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 AGBL1Q96MI9 1066 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 ABHD16BQ9H3Z7 469 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 INCENPQ9NQS7 918 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 FBXO40Q9UH90 709 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 TBX21Q9UL17 535 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 TTC41PQ6P2S7 1318 aa18.46■□□□□ 0.55
NME3-211ENST00000568561 NMT2O60551 498 aa18.45■□□□□ 0.54
NME3-211ENST00000568561 PTGS1P23219 599 aa18.45■□□□□ 0.54
NME3-211ENST00000568561 CST5P28325 142 aaPredicted RBP18.45■□□□□ 0.54
NME3-211ENST00000568561 OAZ1P54368 228 aa18.45■□□□□ 0.54
NME3-211ENST00000568561 CTDSPL2Q05D32 466 aa18.45■□□□□ 0.54
NME3-211ENST00000568561 ZMYM1Q5SVZ6 1142 aa18.45■□□□□ 0.54
NME3-211ENST00000568561 VTI1AQ96AJ9 217 aa18.45■□□□□ 0.54
NME3-211ENST00000568561 GLT1D1Q96MS3 346 aa18.45■□□□□ 0.54
NME3-211ENST00000568561 TOX2Q96NM4 488 aa18.45■□□□□ 0.54
NME3-211ENST00000568561 KATNBL1Q9H079 304 aa18.45■□□□□ 0.54
NME3-211ENST00000568561 ACAD9Q9H845 621 aa18.45■□□□□ 0.54
NME3-211ENST00000568561 RNF146Q9NTX7 359 aa18.45■□□□□ 0.54
NME3-211ENST00000568561 SPTBN5Q9NRC6 3674 aaKnown RBP18.45■□□□□ 0.54
NME3-211ENST00000568561 ZNF536O15090 1300 aa18.45■□□□□ 0.54
NME3-211ENST00000568561 TTC28Q96AY4 2481 aa18.44■□□□□ 0.54
NME3-211ENST00000568561 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.44■□□□□ 0.54
NME3-211ENST00000568561 ERC2O15083 957 aa18.44■□□□□ 0.54
NME3-211ENST00000568561 FOXP2O15409 715 aa18.44■□□□□ 0.54
NME3-211ENST00000568561 FOSL2P15408 326 aa18.44■□□□□ 0.54
NME3-211ENST00000568561 MCCP23508 829 aa18.44■□□□□ 0.54
NME3-211ENST00000568561 STAT2P52630 851 aa18.44■□□□□ 0.54
NME3-211ENST00000568561 BEX3Q00994 111 aa18.44■□□□□ 0.54
NME3-211ENST00000568561 LRRFIP1Q32MZ4 808 aaKnown RBP18.44■□□□□ 0.54
NME3-211ENST00000568561 CCDC174Q6PII3 467 aa18.44■□□□□ 0.54
NME3-211ENST00000568561 KCTD1Q719H9 257 aa18.44■□□□□ 0.54
NME3-211ENST00000568561 UPF3AQ9H1J1 476 aaKnown RBP18.44■□□□□ 0.54
NME3-211ENST00000568561 A1CFQ9NQ94 594 aaKnown RBP18.44■□□□□ 0.54
NME3-211ENST00000568561 SYNPO2Q9UMS6 1093 aa18.44■□□□□ 0.54
NME3-211ENST00000568561 STX8Q9UNK0 236 aa18.44■□□□□ 0.54
NME3-211ENST00000568561 MTMR7Q9Y216 660 aa18.44■□□□□ 0.54
NME3-211ENST00000568561 SOWAHBA6NEL2 793 aa18.43■□□□□ 0.54
NME3-211ENST00000568561 CTAGE5O15320 804 aa18.43■□□□□ 0.54
NME3-211ENST00000568561 TIMP1P01033 207 aa18.43■□□□□ 0.54
NME3-211ENST00000568561 SLC3A2P08195 630 aaKnown RBP18.43■□□□□ 0.54
NME3-211ENST00000568561 ALAS1P13196 640 aa18.43■□□□□ 0.54
NME3-211ENST00000568561 MX1P20591 662 aa18.43■□□□□ 0.54
NME3-211ENST00000568561 SLC1A4P43007 532 aa18.43■□□□□ 0.54
NME3-211ENST00000568561 GJA9P57773 515 aa18.43■□□□□ 0.54
NME3-211ENST00000568561 GNASQ5JWF2 1037 aa18.43■□□□□ 0.54
NME3-211ENST00000568561 FAM133AQ8N9E0 248 aa18.43■□□□□ 0.54
NME3-211ENST00000568561 PCSK9Q8NBP7 692 aaKnown RBP18.43■□□□□ 0.54
NME3-211ENST00000568561 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.43■□□□□ 0.548e-10■□□□□ 9.4
NME3-211ENST00000568561 SPC25Q9HBM1 224 aa18.43■□□□□ 0.54
NME3-211ENST00000568561 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.43■□□□□ 0.54
NME3-211ENST00000568561 ASTN1O14525 1302 aa18.43■□□□□ 0.54
NME3-211ENST00000568561 ELP1O95163 1332 aa18.43■□□□□ 0.54
NME3-211ENST00000568561 GBF1Q92538 1859 aa18.42■□□□□ 0.54
NME3-211ENST00000568561 NOL8Q76FK4 1167 aaKnown RBP18.42■□□□□ 0.54
NME3-211ENST00000568561 STAG1Q8WVM7 1258 aa18.42■□□□□ 0.54
NME3-211ENST00000568561 GMCL1Q96IK5 515 aa18.42■□□□□ 0.54
NME3-211ENST00000568561 PPP1R12CQ9BZL4 782 aa18.42■□□□□ 0.54
NME3-211ENST00000568561 MYO9BQ13459 2157 aa18.42■□□□□ 0.54
NME3-211ENST00000568561 A0A0U1RQG5 324 aaPredicted RBP18.41■□□□□ 0.54
NME3-211ENST00000568561 TSPY2A6NKD2 308 aa18.41■□□□□ 0.54
NME3-211ENST00000568561 DNAJB2P25686 324 aa18.41■□□□□ 0.54
NME3-211ENST00000568561 CDK7P50613 346 aa18.41■□□□□ 0.54
NME3-211ENST00000568561 MUM1L1Q5H9M0 696 aa18.41■□□□□ 0.54
NME3-211ENST00000568561 VPS53Q5VIR6 699 aa18.41■□□□□ 0.54
NME3-211ENST00000568561 FAM160B2Q86V87 743 aa18.41■□□□□ 0.54
NME3-211ENST00000568561 CHURC1Q8WUH1 139 aa18.41■□□□□ 0.54
NME3-211ENST00000568561 TRERF1Q96PN7 1200 aa18.41■□□□□ 0.54
NME3-211ENST00000568561 IL17RBQ9NRM6 502 aa18.41■□□□□ 0.54
NME3-211ENST00000568561 MROH7Q68CQ1 1323 aa18.41■□□□□ 0.54
NME3-211ENST00000568561 ARVCFO00192 962 aa18.4■□□□□ 0.54
NME3-211ENST00000568561 ACRP10323 421 aa18.4■□□□□ 0.54
NME3-211ENST00000568561 CSF2RAP15509 400 aa18.4■□□□□ 0.54
NME3-211ENST00000568561 TNFAIP2Q03169 654 aa18.4■□□□□ 0.54
NME3-211ENST00000568561 GRIN2CQ14957 1233 aa18.4■□□□□ 0.54
NME3-211ENST00000568561 MFSD5Q6N075 450 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms