RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 KCTD1Q719H9 257 aa22.37■■□□□ 1.17
SPSB3-210ENST00000568416 RASGRP2Q7LDG7 609 aa22.37■■□□□ 1.17
SPSB3-210ENST00000568416 PLEKHM2Q8IWE5 1019 aa22.37■■□□□ 1.17
SPSB3-210ENST00000568416 RILPL2Q969X0 211 aa22.37■■□□□ 1.17
SPSB3-210ENST00000568416 LENG1Q96BZ8 264 aaPredicted RBP22.37■■□□□ 1.17
SPSB3-210ENST00000568416 CHMP4CQ96CF2 233 aa22.37■■□□□ 1.17
SPSB3-210ENST00000568416 FAM184BQ9ULE4 1060 aa22.37■■□□□ 1.17
SPSB3-210ENST00000568416 RANBP2P49792 3224 aaKnown RBP22.37■■□□□ 1.17
SPSB3-210ENST00000568416 SDSP20132 328 aa22.36■■□□□ 1.17
SPSB3-210ENST00000568416 GPR153Q6NV75 609 aa22.36■■□□□ 1.17
SPSB3-210ENST00000568416 AGBL1Q96MI9 1066 aa22.36■■□□□ 1.17
SPSB3-210ENST00000568416 LBHD1Q9BQE6 289 aaPredicted RBP22.36■■□□□ 1.17
SPSB3-210ENST00000568416 ACAD9Q9H845 621 aa22.36■■□□□ 1.17
SPSB3-210ENST00000568416 HOMER2Q9NSB8 354 aa22.36■■□□□ 1.17
SPSB3-210ENST00000568416 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.36■■□□□ 1.17
SPSB3-210ENST00000568416 PRKAG2Q9UGJ0 569 aa22.36■■□□□ 1.17
SPSB3-210ENST00000568416 ZHX1Q9UKY1 873 aaPredicted RBP22.36■■□□□ 1.17
SPSB3-210ENST00000568416 PRR12Q9ULL5 1215 aa22.36■■□□□ 1.17
SPSB3-210ENST00000568416 ACVR2BQ13705 512 aa22.35■■□□□ 1.17
SPSB3-210ENST00000568416 TKFCQ3LXA3 575 aa22.35■■□□□ 1.17
SPSB3-210ENST00000568416 TOMM22Q9NS69 142 aa22.35■■□□□ 1.17
SPSB3-210ENST00000568416 RNF146Q9NTX7 359 aa22.35■■□□□ 1.17
SPSB3-210ENST00000568416 TCP11L1Q9NUJ3 509 aa22.35■■□□□ 1.17
SPSB3-210ENST00000568416 RRP12Q5JTH9 1297 aaKnown RBP22.34■■□□□ 1.17
SPSB3-210ENST00000568416 FAM133AQ8N9E0 248 aa22.34■■□□□ 1.17
SPSB3-210ENST00000568416 DCAF4Q8WV16 495 aa22.34■■□□□ 1.17
SPSB3-210ENST00000568416 TSEN34Q9BSV6 310 aaKnown RBP22.34■■□□□ 1.17
SPSB3-210ENST00000568416 ABHD16BQ9H3Z7 469 aa22.34■■□□□ 1.17
SPSB3-210ENST00000568416 A1CFQ9NQ94 594 aaKnown RBP22.34■■□□□ 1.17
SPSB3-210ENST00000568416 PDLIM7Q9NR12 457 aa22.34■■□□□ 1.17
SPSB3-210ENST00000568416 SYNRGQ9UMZ2 1314 aa22.33■■□□□ 1.17
SPSB3-210ENST00000568416 A0A1W2PQ45 241 aaPredicted RBP22.33■■□□□ 1.17
SPSB3-210ENST00000568416 A0A1W2PQY0 241 aa22.33■■□□□ 1.17
SPSB3-210ENST00000568416 SNAP25P60880 206 aa22.33■■□□□ 1.17
SPSB3-210ENST00000568416 HAND2P61296 217 aa22.33■■□□□ 1.17
SPSB3-210ENST00000568416 CNTN2Q02246 1040 aa22.33■■□□□ 1.17
SPSB3-210ENST00000568416 ARMCX2Q7L311 632 aa22.33■■□□□ 1.17
SPSB3-210ENST00000568416 KLHDC9Q8NEP7 349 aa22.33■■□□□ 1.17
SPSB3-210ENST00000568416 TRERF1Q96PN7 1200 aa22.33■■□□□ 1.17
SPSB3-210ENST00000568416 TMEM47Q9BQJ4 181 aa22.33■■□□□ 1.17
SPSB3-210ENST00000568416 KATNBL1Q9H079 304 aa22.33■■□□□ 1.17
SPSB3-210ENST00000568416 MTMR7Q9Y216 660 aa22.33■■□□□ 1.17
SPSB3-210ENST00000568416 POTEB2H3BUK9 544 aa22.32■■□□□ 1.16
SPSB3-210ENST00000568416 DUSP11O75319 330 aaKnown RBP22.32■■□□□ 1.16
SPSB3-210ENST00000568416 TOP1P11387 765 aaKnown RBP22.32■■□□□ 1.16
SPSB3-210ENST00000568416 PCP11498 1178 aaKnown RBP22.32■■□□□ 1.16
SPSB3-210ENST00000568416 ALAS1P13196 640 aa22.32■■□□□ 1.16
SPSB3-210ENST00000568416 MFAP1P55081 439 aaKnown RBP22.32■■□□□ 1.16
SPSB3-210ENST00000568416 CCDC96Q2M329 555 aa22.32■■□□□ 1.16
SPSB3-210ENST00000568416 CCSAPQ6IQ19 270 aaPredicted RBP22.32■■□□□ 1.16
SPSB3-210ENST00000568416 CCDC174Q6PII3 467 aa22.32■■□□□ 1.16
SPSB3-210ENST00000568416 BTNL9Q6UXG8 535 aa22.32■■□□□ 1.16
SPSB3-210ENST00000568416 CCDC144CPQ8IYA2 1237 aa22.32■■□□□ 1.16
SPSB3-210ENST00000568416 PRDM5Q9NQX1 630 aaPredicted RBP22.32■■□□□ 1.16
SPSB3-210ENST00000568416 ADCY6O43306 1168 aa22.31■■□□□ 1.16
SPSB3-210ENST00000568416 ACLYP53396 1101 aa22.31■■□□□ 1.16
SPSB3-210ENST00000568416 TLE2Q04725 743 aa22.31■■□□□ 1.16
SPSB3-210ENST00000568416 AKNAD1Q5T1N1 836 aa22.31■■□□□ 1.16
SPSB3-210ENST00000568416 TTBK2Q6IQ55 1244 aa22.31■■□□□ 1.16
SPSB3-210ENST00000568416 SH3RF1Q7Z6J0 888 aa22.31■■□□□ 1.16
SPSB3-210ENST00000568416 TBC1D10CQ8IV04 446 aa22.31■■□□□ 1.16
SPSB3-210ENST00000568416 RANBP17Q9H2T7 1088 aaKnown RBP22.31■■□□□ 1.16
SPSB3-210ENST00000568416 LTBP2Q14767 1821 aa22.31■■□□□ 1.16
SPSB3-210ENST00000568416 TRIM43BA6NCK2 446 aa22.3■■□□□ 1.16
SPSB3-210ENST00000568416 SOWAHBA6NEL2 793 aa22.3■■□□□ 1.16
SPSB3-210ENST00000568416 MOXD2PA6NHM9 499 aa22.3■■□□□ 1.16
SPSB3-210ENST00000568416 CST5P28325 142 aaPredicted RBP22.3■■□□□ 1.16
SPSB3-210ENST00000568416 CCDC144BQ3MJ40 725 aa22.3■■□□□ 1.16
SPSB3-210ENST00000568416 MUM1L1Q5H9M0 696 aa22.3■■□□□ 1.16
SPSB3-210ENST00000568416 MFSD6Q6ZSS7 791 aa22.3■■□□□ 1.16
SPSB3-210ENST00000568416 TRIM43Q96BQ3 446 aaPredicted RBP22.3■■□□□ 1.16
SPSB3-210ENST00000568416 MYADML2A6NDP7 307 aa22.29■■□□□ 1.16
SPSB3-210ENST00000568416 ICAM1P05362 532 aa22.29■■□□□ 1.16
SPSB3-210ENST00000568416 IRX5P78411 483 aaPredicted RBP22.29■■□□□ 1.16
SPSB3-210ENST00000568416 KCNA10Q16322 511 aa22.29■■□□□ 1.16
SPSB3-210ENST00000568416 BADQ92934 168 aa22.29■■□□□ 1.16
SPSB3-210ENST00000568416 TTC14Q96N46 770 aa22.29■■□□□ 1.16
SPSB3-210ENST00000568416 UPF3AQ9H1J1 476 aaKnown RBP22.29■■□□□ 1.16
SPSB3-210ENST00000568416 CCPG1Q9ULG6 757 aa22.29■■□□□ 1.16
SPSB3-210ENST00000568416 ASTN1O14525 1302 aa22.29■■□□□ 1.16
SPSB3-210ENST00000568416 SZT2Q5T011 3432 aa22.28■■□□□ 1.16
SPSB3-210ENST00000568416 ASB14A6NK59 587 aa22.28■■□□□ 1.16
SPSB3-210ENST00000568416 PDHBP11177 359 aa22.28■■□□□ 1.16
SPSB3-210ENST00000568416 SLC16A2P36021 539 aa22.28■■□□□ 1.16
SPSB3-210ENST00000568416 GJA9P57773 515 aa22.28■■□□□ 1.16
SPSB3-210ENST00000568416 SYDE2Q5VT97 1194 aa22.28■■□□□ 1.16
SPSB3-210ENST00000568416 CWC27Q6UX04 472 aaKnown RBP22.28■■□□□ 1.16
SPSB3-210ENST00000568416 NUP133Q8WUM0 1156 aa22.28■■□□□ 1.16
SPSB3-210ENST00000568416 RNF41Q9H4P4 317 aaPredicted RBP22.28■■□□□ 1.16
SPSB3-210ENST00000568416 STARD7Q9NQZ5 370 aa22.28■■□□□ 1.16
SPSB3-210ENST00000568416 CYP39A1Q9NYL5 469 aa22.28■■□□□ 1.16
SPSB3-210ENST00000568416 FRMPD2Q68DX3 1309 aaPredicted RBP22.28■■□□□ 1.16
SPSB3-210ENST00000568416 SMCHD1A6NHR9 2005 aa22.27■■□□□ 1.16
SPSB3-210ENST00000568416 CLTBP09497 229 aa22.27■■□□□ 1.16
SPSB3-210ENST00000568416 NKX3-2P78367 333 aa22.27■■□□□ 1.16
SPSB3-210ENST00000568416 GPCPD1Q9NPB8 672 aa22.27■■□□□ 1.16
SPSB3-210ENST00000568416 DIAPH3Q9NSV4 1193 aa22.27■■□□□ 1.16
SPSB3-210ENST00000568416 NEDD4P46934 1319 aa22.27■■□□□ 1.16
SPSB3-210ENST00000568416 HIP1O00291 1037 aa22.26■■□□□ 1.15
SPSB3-210ENST00000568416 ZNF213O14771 459 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms