RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 MCM3APO60318 1980 aa17.91■□□□□ 0.46
COMMD4-223ENST00000568301 CHD7Q9P2D1 2997 aa17.91■□□□□ 0.46
COMMD4-223ENST00000568301 MYADML2A6NDP7 307 aa17.91■□□□□ 0.46
COMMD4-223ENST00000568301 MOXD2PA6NHM9 499 aa17.91■□□□□ 0.46
COMMD4-223ENST00000568301 ERC2O15083 957 aa17.91■□□□□ 0.46
COMMD4-223ENST00000568301 PRDM1O75626 825 aa17.91■□□□□ 0.46
COMMD4-223ENST00000568301 TIMP1P01033 207 aa17.91■□□□□ 0.46
COMMD4-223ENST00000568301 SLC3A2P08195 630 aaKnown RBP17.91■□□□□ 0.46
COMMD4-223ENST00000568301 IRX5P78411 483 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-223ENST00000568301 CCSAPQ6IQ19 270 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-223ENST00000568301 SYMPKQ92797 1274 aaKnown RBP17.91■□□□□ 0.46
COMMD4-223ENST00000568301 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.91■□□□□ 0.46
COMMD4-223ENST00000568301 ABHD16BQ9H3Z7 469 aa17.91■□□□□ 0.46
COMMD4-223ENST00000568301 ZNF576Q9H609 170 aa17.91■□□□□ 0.46
COMMD4-223ENST00000568301 RAVER2Q9HCJ3 691 aaKnown RBP17.91■□□□□ 0.46
COMMD4-223ENST00000568301 XIRP2A4UGR9 3374 aa17.91■□□□□ 0.46
COMMD4-223ENST00000568301 TSPY3P0CV98 308 aa17.9■□□□□ 0.46
COMMD4-223ENST00000568301 TSPY8P0CW00 308 aa17.9■□□□□ 0.46
COMMD4-223ENST00000568301 BMP3P12645 472 aa17.9■□□□□ 0.46
COMMD4-223ENST00000568301 SLC4A3P48751 1232 aa17.9■□□□□ 0.46
COMMD4-223ENST00000568301 ACVR2BQ13705 512 aa17.9■□□□□ 0.46
COMMD4-223ENST00000568301 ANKRD35Q8N283 1001 aa17.9■□□□□ 0.46
COMMD4-223ENST00000568301 ZHX1Q9UKY1 873 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-223ENST00000568301 TBX21Q9UL17 535 aa17.9■□□□□ 0.46
COMMD4-223ENST00000568301 PLIN4Q96Q06 1357 aa17.9■□□□□ 0.46
COMMD4-223ENST00000568301 CST5P28325 142 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-223ENST00000568301 SLFN13Q68D06 897 aa17.89■□□□□ 0.45
COMMD4-223ENST00000568301 MFSD5Q6N075 450 aa17.89■□□□□ 0.45
COMMD4-223ENST00000568301 C16orf59Q7L2K0 433 aa17.89■□□□□ 0.45
COMMD4-223ENST00000568301 LRRC47Q8N1G4 583 aaKnown RBP17.89■□□□□ 0.45
COMMD4-223ENST00000568301 PCSK9Q8NBP7 692 aaKnown RBP17.89■□□□□ 0.45
COMMD4-223ENST00000568301 PI4K2BQ8TCG2 481 aa17.89■□□□□ 0.45
COMMD4-223ENST00000568301 TIFAQ96CG3 184 aa17.89■□□□□ 0.45
COMMD4-223ENST00000568301 SEC62Q99442 399 aaKnown RBP17.89■□□□□ 0.45
COMMD4-223ENST00000568301 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-223ENST00000568301 ELP1O95163 1332 aa17.89■□□□□ 0.45
COMMD4-223ENST00000568301 ADCY6O43306 1168 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 CDK7P50613 346 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 TFAP4Q01664 338 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 PPARAQ07869 468 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 TJAP1Q5JTD0 557 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 PPP4R3BQ5MIZ7 849 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 ZMYM1Q5SVZ6 1142 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 CHURC1Q8WUH1 139 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 GMCL1Q96IK5 515 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 FGD4Q96M96 766 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 GLT1D1Q96MS3 346 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 NAPBQ9H115 298 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 SPC25Q9HBM1 224 aa17.88■□□□□ 0.45
COMMD4-223ENST00000568301 MYO9BQ13459 2157 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 GRXCR1A8MXD5 290 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 TMEM232C9JQI7 657 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 PLA2G6O60733 806 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 PBX2P40425 430 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 STAT2P52630 851 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 GJA9P57773 515 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 CCDC144BQ3MJ40 725 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 TMEM240Q5SV17 173 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 FAM160B2Q86V87 743 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 FSD1Q9BTV5 496 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 UPF3AQ9H1J1 476 aaKnown RBP17.87■□□□□ 0.45
COMMD4-223ENST00000568301 PCDHB15Q9Y5E8 787 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 MROH7Q68CQ1 1323 aa17.87■□□□□ 0.45
COMMD4-223ENST00000568301 ASGR1P07306 291 aa17.86■□□□□ 0.45
COMMD4-223ENST00000568301 C6orf222P0C671 652 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-223ENST00000568301 CSF2RAP15509 400 aa17.86■□□□□ 0.45
COMMD4-223ENST00000568301 NKX3-2P78367 333 aa17.86■□□□□ 0.45
COMMD4-223ENST00000568301 ARMCX2Q7L311 632 aa17.86■□□□□ 0.45
COMMD4-223ENST00000568301 FAM133AQ8N9E0 248 aa17.86■□□□□ 0.45
COMMD4-223ENST00000568301 STAG1Q8WVM7 1258 aa17.86■□□□□ 0.45
COMMD4-223ENST00000568301 VTI1AQ96AJ9 217 aa17.86■□□□□ 0.45
COMMD4-223ENST00000568301 PBX4Q9BYU1 374 aa17.86■□□□□ 0.45
COMMD4-223ENST00000568301 ACAD9Q9H845 621 aa17.86■□□□□ 0.45
COMMD4-223ENST00000568301 ACRP10323 421 aa17.85■□□□□ 0.45
COMMD4-223ENST00000568301 SLC1A4P43007 532 aa17.85■□□□□ 0.45
COMMD4-223ENST00000568301 PPIGQ13427 754 aaKnown RBP eCLIP17.85■□□□□ 0.451e-6■■■■□ 25.8
COMMD4-223ENST00000568301 TKFCQ3LXA3 575 aa17.85■□□□□ 0.45
COMMD4-223ENST00000568301 GNASQ5JWF2 1037 aa17.85■□□□□ 0.45
COMMD4-223ENST00000568301 RASIP1Q5U651 963 aa17.85■□□□□ 0.45
COMMD4-223ENST00000568301 CCDC129Q6ZRS4 1044 aa17.85■□□□□ 0.45
COMMD4-223ENST00000568301 CCDC144CPQ8IYA2 1237 aa17.85■□□□□ 0.45
COMMD4-223ENST00000568301 OTUD7AQ8TE49 926 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-223ENST00000568301 PPM1EQ8WY54 764 aa17.85■□□□□ 0.45
COMMD4-223ENST00000568301 KATNBL1Q9H079 304 aa17.85■□□□□ 0.45
COMMD4-223ENST00000568301 ZNF536O15090 1300 aa17.84■□□□□ 0.45
COMMD4-223ENST00000568301 ARVCFO00192 962 aa17.84■□□□□ 0.45
COMMD4-223ENST00000568301 MX1P20591 662 aa17.84■□□□□ 0.45
COMMD4-223ENST00000568301 MCCP23508 829 aa17.84■□□□□ 0.45
COMMD4-223ENST00000568301 CNTN2Q02246 1040 aa17.84■□□□□ 0.45
COMMD4-223ENST00000568301 RCSD1Q6JBY9 416 aa17.84■□□□□ 0.45
COMMD4-223ENST00000568301 PPP1R12CQ9BZL4 782 aa17.84■□□□□ 0.45
COMMD4-223ENST00000568301 PRDM12Q9H4Q4 367 aa17.84■□□□□ 0.45
COMMD4-223ENST00000568301 HOMER2Q9NSB8 354 aa17.84■□□□□ 0.45
COMMD4-223ENST00000568301 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.84■□□□□ 0.45
COMMD4-223ENST00000568301 A0A0U1RQG5 324 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-223ENST00000568301 ASB14A6NK59 587 aa17.83■□□□□ 0.44
COMMD4-223ENST00000568301 TNFRSF10AO00220 468 aa17.83■□□□□ 0.44
COMMD4-223ENST00000568301 ZNF365Q70YC5 407 aa17.83■□□□□ 0.44
COMMD4-223ENST00000568301 FAM126BQ8IXS8 530 aa17.83■□□□□ 0.44
COMMD4-223ENST00000568301 TMEM199Q8N511 208 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms