RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 ZSWIM5Q9P217 1185 aa11.2□□□□□ -0.62
SF3B3-211ENST00000568291 ZNF214Q9UL59 606 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-211ENST00000568291 MCM3APO60318 1980 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 PLIN4Q96Q06 1357 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 ZMYM6O95789 1325 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 DNM1LO00429 736 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 DLL1O00548 723 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 ZBED4O75132 1171 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 RTP1P59025 263 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 COL9A3Q14050 684 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-211ENST00000568291 OLFML2BQ68BL8 750 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 CYB5R4Q7L1T6 521 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 MB21D1Q8N884 522 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 SHCBP1Q8NEM2 672 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 RUFY2Q8WXA3 655 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 ESR2Q92731 530 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 AGBL1Q96MI9 1066 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 LBHD1Q9BQE6 289 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-211ENST00000568291 RNF41Q9H4P4 317 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-211ENST00000568291 MTMR10Q9NXD2 777 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 CTNNA3Q9UI47 895 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 FEM1BQ9UK73 627 aa11.19□□□□□ -0.62
SF3B3-211ENST00000568291 CTDP1Q9Y5B0 961 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-211ENST00000568291 DDX49Q9Y6V7 483 aaKnown RBP11.19□□□□□ -0.62
SF3B3-211ENST00000568291 KBTBD13C9JR72 458 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 IGHA2P01877 340 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 CYP21A2P08686 494 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 TOP1P11387 765 aaKnown RBP11.18□□□□□ -0.62
SF3B3-211ENST00000568291 FCER1AP12319 257 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 NOVP48745 357 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 GJC2Q5T442 439 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-211ENST00000568291 ANO1Q5XXA6 986 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 STOX1Q6ZVD7 989 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 RIOX2Q8IUF8 465 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 GMCL1Q96IK5 515 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 MMP19Q99542 508 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 UBA5Q9GZZ9 404 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 MROH8Q9H579 483 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 SLC38A10Q9HBR0 1119 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 SENP2Q9HC62 589 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 TCP11L1Q9NUJ3 509 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 PRKAG2Q9UGJ0 569 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 PRR12Q9ULL5 1215 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 ATP11BQ9Y2G3 1177 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 STXBP5LQ9Y2K9 1186 aa11.18□□□□□ -0.62
SF3B3-211ENST00000568291 RBM8AQ9Y5S9 174 aaKnown RBP11.18□□□□□ -0.62
SF3B3-211ENST00000568291 COL6A3P12111 3177 aa11.17□□□□□ -0.62
SF3B3-211ENST00000568291 STRNO43815 780 aa11.17□□□□□ -0.62
SF3B3-211ENST00000568291 STAT2P52630 851 aa11.17□□□□□ -0.62
SF3B3-211ENST00000568291 ENAHQ8N8S7 591 aaPredicted RBP11.17□□□□□ -0.62
SF3B3-211ENST00000568291 MAP4K1Q92918 833 aa11.17□□□□□ -0.62
SF3B3-211ENST00000568291 PURBQ96QR8 312 aaKnown RBP11.17□□□□□ -0.62
SF3B3-211ENST00000568291 ZSCAN10Q96SZ4 725 aaPredicted RBP11.17□□□□□ -0.62
SF3B3-211ENST00000568291 ESYT1Q9BSJ8 1104 aa11.17□□□□□ -0.62
SF3B3-211ENST00000568291 LSG1Q9H089 658 aaKnown RBP11.17□□□□□ -0.62
SF3B3-211ENST00000568291 GPHNQ9NQX3 736 aaPredicted RBP11.17□□□□□ -0.62
SF3B3-211ENST00000568291 SLC5A4Q9NY91 659 aa11.17□□□□□ -0.62
SF3B3-211ENST00000568291 ZNF536O15090 1300 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 RAD50Q92878 1312 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 E7EWF7 191 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 SEPT4O43236 478 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 SLC25A27O95847 323 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 PDHBP11177 359 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 ALAS1P13196 640 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 KCTD2Q14681 263 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 BMP2KLQ5H9B9 411 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 MUM1L1Q5H9M0 696 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 KIAA1211Q6ZU35 1233 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 ABRAQ8N0Z2 381 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 ARRDC4Q8NCT1 418 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 CHURC1Q8WUH1 139 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 TEX13BQ9BXU2 312 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 ANO2Q9NQ90 1003 aa11.16□□□□□ -0.62
SF3B3-211ENST00000568291 PRDM5Q9NQX1 630 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-211ENST00000568291 TNKSO95271 1327 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 CNTN2Q02246 1040 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 TRIM60Q495X7 471 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 SYDE2Q5VT97 1194 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 FAM160B2Q86V87 743 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 PNMA1Q8ND90 353 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 DCAF4Q8WV16 495 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 DDX11Q96FC9 970 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 MAML3Q96JK9 1138 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 TTC14Q96N46 770 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 UBAC1Q9BSL1 405 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 KRT23Q9C075 422 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 KAT14Q9H8E8 782 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 VAT1LQ9HCJ6 419 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 SYNPO2Q9UMS6 1093 aa11.15□□□□□ -0.62
SF3B3-211ENST00000568291 SLC27A2O14975 620 aa11.14□□□□□ -0.63
SF3B3-211ENST00000568291 PCP11498 1178 aaKnown RBP11.14□□□□□ -0.63
SF3B3-211ENST00000568291 ZNF543Q08ER8 600 aa11.14□□□□□ -0.63
SF3B3-211ENST00000568291 SNX17Q15036 470 aa11.14□□□□□ -0.63
SF3B3-211ENST00000568291 LRRC41Q15345 812 aa11.14□□□□□ -0.63
SF3B3-211ENST00000568291 ZNF792Q3KQV3 632 aa11.14□□□□□ -0.63
SF3B3-211ENST00000568291 PPP4R3BQ5MIZ7 849 aa11.14□□□□□ -0.63
SF3B3-211ENST00000568291 SLC39A5Q6ZMH5 540 aa11.14□□□□□ -0.63
SF3B3-211ENST00000568291 IQCA1Q86XH1 822 aa11.14□□□□□ -0.63
SF3B3-211ENST00000568291 DGKHQ86XP1 1220 aa11.14□□□□□ -0.63
SF3B3-211ENST00000568291 ANKRD35Q8N283 1001 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms