RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 PI4K2BQ8TCG2 481 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 HOMER2Q9NSB8 354 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 TBX21Q9UL17 535 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 DDX49Q9Y6V7 483 aaKnown RBP27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 PLIN4Q96Q06 1357 aa27.32■■□□□ 1.96
CNEP1R1-209ENST00000567712 LCTP09848 1927 aa27.31■■□□□ 1.96
CNEP1R1-209ENST00000567712 C6orf222P0C671 652 aaPredicted RBP27.31■■□□□ 1.96
CNEP1R1-209ENST00000567712 CST5P28325 142 aaPredicted RBP27.31■■□□□ 1.96
CNEP1R1-209ENST00000567712 NUP133Q8WUM0 1156 aa27.31■■□□□ 1.96
CNEP1R1-209ENST00000567712 UPF3AQ9H1J1 476 aaKnown RBP27.31■■□□□ 1.96
CNEP1R1-209ENST00000567712 INCENPQ9NQS7 918 aa27.31■■□□□ 1.96
CNEP1R1-209ENST00000567712 DCDC2CA8MYV0 355 aa27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 FOXP2O15409 715 aa27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 ASGR1P07306 291 aa27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 BMP3P12645 472 aa27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 PTGS1P23219 599 aa27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 C16orf59Q7L2K0 433 aa27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 RASGRP2Q7LDG7 609 aa27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 CCDC144CPQ8IYA2 1237 aa27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 CHST13Q8NET6 341 aa27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 GPATCH3Q96I76 525 aa27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 CTDP1Q9Y5B0 961 aaPredicted RBP27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 ZNF536O15090 1300 aa27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 LRRC37A2A6NM11 1700 aa27.3■■□□□ 1.96
CNEP1R1-209ENST00000567712 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.29■■□□□ 1.96
CNEP1R1-209ENST00000567712 TMEM232C9JQI7 657 aa27.29■■□□□ 1.96
CNEP1R1-209ENST00000567712 TIMP1P01033 207 aa27.29■■□□□ 1.96
CNEP1R1-209ENST00000567712 OAZ1P54368 228 aa27.29■■□□□ 1.96
CNEP1R1-209ENST00000567712 GJA9P57773 515 aa27.29■■□□□ 1.96
CNEP1R1-209ENST00000567712 TFAP4Q01664 338 aa27.29■■□□□ 1.96
CNEP1R1-209ENST00000567712 AGBL1Q96MI9 1066 aa27.29■■□□□ 1.96
CNEP1R1-209ENST00000567712 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.29■■□□□ 1.967e-7■■□□□ 13.4
CNEP1R1-209ENST00000567712 ABHD16BQ9H3Z7 469 aa27.29■■□□□ 1.96
CNEP1R1-209ENST00000567712 PCDHB15Q9Y5E8 787 aa27.29■■□□□ 1.96
CNEP1R1-209ENST00000567712 ASTN1O14525 1302 aa27.28■■□□□ 1.96
CNEP1R1-209ENST00000567712 TSPY3P0CV98 308 aa27.28■■□□□ 1.96
CNEP1R1-209ENST00000567712 TSPY8P0CW00 308 aa27.28■■□□□ 1.96
CNEP1R1-209ENST00000567712 PPARAQ07869 468 aa27.28■■□□□ 1.96
CNEP1R1-209ENST00000567712 FAM133AQ8N9E0 248 aa27.28■■□□□ 1.96
CNEP1R1-209ENST00000567712 SYNPO2Q9UMS6 1093 aa27.28■■□□□ 1.96
CNEP1R1-209ENST00000567712 ELP1O95163 1332 aa27.27■■□□□ 1.96
CNEP1R1-209ENST00000567712 SOWAHBA6NEL2 793 aa27.27■■□□□ 1.96
CNEP1R1-209ENST00000567712 SNAP25P60880 206 aa27.27■■□□□ 1.96
CNEP1R1-209ENST00000567712 GRIN2CQ14957 1233 aa27.27■■□□□ 1.96
CNEP1R1-209ENST00000567712 ZMYM1Q5SVZ6 1142 aa27.27■■□□□ 1.96
CNEP1R1-209ENST00000567712 CCDC129Q6ZRS4 1044 aa27.27■■□□□ 1.96
CNEP1R1-209ENST00000567712 GLT1D1Q96MS3 346 aa27.27■■□□□ 1.96
CNEP1R1-209ENST00000567712 ZNF287Q9HBT7 754 aa27.27■■□□□ 1.96
CNEP1R1-209ENST00000567712 A1CFQ9NQ94 594 aaKnown RBP27.27■■□□□ 1.96
CNEP1R1-209ENST00000567712 FBXO40Q9UH90 709 aa27.27■■□□□ 1.96
CNEP1R1-209ENST00000567712 NMT2O60551 498 aa27.26■■□□□ 1.95
CNEP1R1-209ENST00000567712 BEX3Q00994 111 aa27.26■■□□□ 1.95
CNEP1R1-209ENST00000567712 GNASQ5JWF2 1037 aa27.26■■□□□ 1.95
CNEP1R1-209ENST00000567712 IL17RBQ9NRM6 502 aa27.26■■□□□ 1.95
CNEP1R1-209ENST00000567712 TTC41PQ6P2S7 1318 aa27.25■■□□□ 1.95
CNEP1R1-209ENST00000567712 FOSL2P15408 326 aa27.25■■□□□ 1.95
CNEP1R1-209ENST00000567712 MCCP23508 829 aa27.25■■□□□ 1.95
CNEP1R1-209ENST00000567712 DNAJB2P25686 324 aa27.25■■□□□ 1.95
CNEP1R1-209ENST00000567712 PDE4BQ07343 736 aa27.25■■□□□ 1.95
CNEP1R1-209ENST00000567712 MFSD5Q6N075 450 aa27.25■■□□□ 1.95
CNEP1R1-209ENST00000567712 PCSK9Q8NBP7 692 aaKnown RBP27.25■■□□□ 1.95
CNEP1R1-209ENST00000567712 VTI1AQ96AJ9 217 aa27.25■■□□□ 1.95
CNEP1R1-209ENST00000567712 NAPBQ9H115 298 aa27.25■■□□□ 1.95
CNEP1R1-209ENST00000567712 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.25■■□□□ 1.95
CNEP1R1-209ENST00000567712 GBF1Q92538 1859 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 GRXCR1A8MXD5 290 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 ARVCFO00192 962 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 STAT2P52630 851 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 NKX3-2P78367 333 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 CTDSPL2Q05D32 466 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 TMEM240Q5SV17 173 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 TMEM63BQ5T3F8 832 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 KCTD1Q719H9 257 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 FAM126BQ8IXS8 530 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 FSD1Q9BTV5 496 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 ACAD9Q9H845 621 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 RNF146Q9NTX7 359 aa27.24■■□□□ 1.95
CNEP1R1-209ENST00000567712 TMEM265A0A087WTH1 108 aa27.23■■□□□ 1.95
CNEP1R1-209ENST00000567712 CSF2RAP15509 400 aa27.23■■□□□ 1.95
CNEP1R1-209ENST00000567712 MUM1L1Q5H9M0 696 aa27.23■■□□□ 1.95
CNEP1R1-209ENST00000567712 USP38Q8NB14 1042 aa27.23■■□□□ 1.95
CNEP1R1-209ENST00000567712 STAG1Q8WVM7 1258 aa27.23■■□□□ 1.95
CNEP1R1-209ENST00000567712 GMCL1Q96IK5 515 aa27.23■■□□□ 1.95
CNEP1R1-209ENST00000567712 PURBQ96QR8 312 aaKnown RBP27.23■■□□□ 1.95
CNEP1R1-209ENST00000567712 NACAP1Q9BZK3 213 aa27.23■■□□□ 1.95
CNEP1R1-209ENST00000567712 PPP1R12CQ9BZL4 782 aa27.23■■□□□ 1.95
CNEP1R1-209ENST00000567712 ISY1Q9ULR0 285 aaKnown RBP27.23■■□□□ 1.95
CNEP1R1-209ENST00000567712 A0A0U1RQG5 324 aaPredicted RBP27.22■■□□□ 1.95
CNEP1R1-209ENST00000567712 ACRP10323 421 aa27.22■■□□□ 1.95
CNEP1R1-209ENST00000567712 PBX2P40425 430 aa27.22■■□□□ 1.95
CNEP1R1-209ENST00000567712 SLC1A4P43007 532 aa27.22■■□□□ 1.95
CNEP1R1-209ENST00000567712 GNEQ9Y223 722 aaKnown RBP27.22■■□□□ 1.95
CNEP1R1-209ENST00000567712 MROH7Q68CQ1 1323 aa27.21■■□□□ 1.95
CNEP1R1-209ENST00000567712 CD4P01730 458 aa27.21■■□□□ 1.95
CNEP1R1-209ENST00000567712 TNFAIP2Q03169 654 aa27.21■■□□□ 1.95
CNEP1R1-209ENST00000567712 RASIP1Q5U651 963 aa27.21■■□□□ 1.95
CNEP1R1-209ENST00000567712 VPS53Q5VIR6 699 aa27.21■■□□□ 1.95
CNEP1R1-209ENST00000567712 CCDC174Q6PII3 467 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms