RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.13■□□□□ 0.49
CDR2-206ENST00000567406 SYNGAP1Q96PV0 1343 aa18.13■□□□□ 0.49
CDR2-206ENST00000567406 STAT2P52630 851 aa18.12■□□□□ 0.49
CDR2-206ENST00000567406 ACVR2BQ13705 512 aa18.12■□□□□ 0.49
CDR2-206ENST00000567406 KCNA10Q16322 511 aa18.12■□□□□ 0.49
CDR2-206ENST00000567406 MAMDC4Q6UXC1 1216 aa18.12■□□□□ 0.49
CDR2-206ENST00000567406 STAG1Q8WVM7 1258 aa18.12■□□□□ 0.49
CDR2-206ENST00000567406 EVI5LQ96CN4 794 aa18.12■□□□□ 0.49
CDR2-206ENST00000567406 ZNF536O15090 1300 aa18.12■□□□□ 0.49
CDR2-206ENST00000567406 A0A0D9SFI3 127 aa18.11■□□□□ 0.49
CDR2-206ENST00000567406 POTEB2H3BUK9 544 aa18.11■□□□□ 0.49
CDR2-206ENST00000567406 PTGS1P23219 599 aa18.11■□□□□ 0.49
CDR2-206ENST00000567406 ACLYP53396 1101 aa18.11■□□□□ 0.49
CDR2-206ENST00000567406 CCDC144BQ3MJ40 725 aa18.11■□□□□ 0.49
CDR2-206ENST00000567406 C1orf53Q5VUE5 145 aa18.11■□□□□ 0.49
CDR2-206ENST00000567406 ARMCX2Q7L311 632 aa18.11■□□□□ 0.49
CDR2-206ENST00000567406 MSL3Q8N5Y2 521 aaKnown RBP18.11■□□□□ 0.49
CDR2-206ENST00000567406 KLHDC9Q8NEP7 349 aa18.11■□□□□ 0.49
CDR2-206ENST00000567406 CHST13Q8NET6 341 aa18.11■□□□□ 0.49
CDR2-206ENST00000567406 GMCL1Q96IK5 515 aa18.11■□□□□ 0.49
CDR2-206ENST00000567406 SYNPO2Q9UMS6 1093 aa18.11■□□□□ 0.49
CDR2-206ENST00000567406 CLTBP09497 229 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 C6orf222P0C671 652 aaPredicted RBP18.1■□□□□ 0.49
CDR2-206ENST00000567406 ALAS1P13196 640 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 OAZ1P54368 228 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 EPHB4P54760 987 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 RRP12Q5JTH9 1297 aaKnown RBP18.1■□□□□ 0.49
CDR2-206ENST00000567406 CCSAPQ6IQ19 270 aaPredicted RBP18.1■□□□□ 0.49
CDR2-206ENST00000567406 B4GALNT3Q6L9W6 998 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 ZNF467Q7Z7K2 595 aaPredicted RBP18.1■□□□□ 0.49
CDR2-206ENST00000567406 FAM160B2Q86V87 743 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 CCDC144CPQ8IYA2 1237 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 CHURC1Q8WUH1 139 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 LNPKQ9C0E8 428 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 A1CFQ9NQ94 594 aaKnown RBP18.1■□□□□ 0.49
CDR2-206ENST00000567406 STARD7Q9NQZ5 370 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 TOMM22Q9NS69 142 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 RNF146Q9NTX7 359 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 FBXO40Q9UH90 709 aa18.1■□□□□ 0.49
CDR2-206ENST00000567406 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.09■□□□□ 0.49
CDR2-206ENST00000567406 SOWAHBA6NEL2 793 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 DUSP11O75319 330 aaKnown RBP18.09■□□□□ 0.49
CDR2-206ENST00000567406 FGAP02671 866 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 SLC16A2P36021 539 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 HAND2P61296 217 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 HDAC1Q13547 482 aaPredicted RBP18.09■□□□□ 0.49
CDR2-206ENST00000567406 MUM1L1Q5H9M0 696 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 TTBK2Q6IQ55 1244 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 RCSD1Q6JBY9 416 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.09■□□□□ 0.49
CDR2-206ENST00000567406 ZNF589Q86UQ0 364 aaPredicted RBP18.09■□□□□ 0.49
CDR2-206ENST00000567406 GUCD1Q96NT3 240 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 TRERF1Q96PN7 1200 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 PURBQ96QR8 312 aaKnown RBP18.09■□□□□ 0.49
CDR2-206ENST00000567406 KATNBL1Q9H079 304 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 ACAD9Q9H845 621 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 HELLSQ9NRZ9 838 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 TMEM39AQ9NV64 488 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 PRR12Q9ULL5 1215 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 STXBP5LQ9Y2K9 1186 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 UNC80Q8N2C7 3258 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 EYSQ5T1H1 3165 aa18.09■□□□□ 0.49
CDR2-206ENST00000567406 TRIM6-TRIM34B2RNG4 842 aa18.08■□□□□ 0.48
CDR2-206ENST00000567406 FAAP100Q0VG06 881 aa18.08■□□□□ 0.48
CDR2-206ENST00000567406 NMIQ13287 307 aaPredicted RBP18.08■□□□□ 0.48
CDR2-206ENST00000567406 CCDC96Q2M329 555 aa18.08■□□□□ 0.48
CDR2-206ENST00000567406 MCMDC2Q4G0Z9 681 aa18.08■□□□□ 0.48
CDR2-206ENST00000567406 RILPL2Q969X0 211 aa18.08■□□□□ 0.48
CDR2-206ENST00000567406 VTI1AQ96AJ9 217 aa18.08■□□□□ 0.48
CDR2-206ENST00000567406 TSEN34Q9BSV6 310 aaKnown RBP18.08■□□□□ 0.48
CDR2-206ENST00000567406 ABHD16BQ9H3Z7 469 aa18.08■□□□□ 0.48
CDR2-206ENST00000567406 ANAPC4Q9UJX5 808 aa18.08■□□□□ 0.48
CDR2-206ENST00000567406 CDH23Q9H251 3354 aa18.08■□□□□ 0.48
CDR2-206ENST00000567406 ASTN1O14525 1302 aa18.07■□□□□ 0.48
CDR2-206ENST00000567406 FRMPD2Q68DX3 1309 aaPredicted RBP18.07■□□□□ 0.48
CDR2-206ENST00000567406 ASGR1P07306 291 aa18.07■□□□□ 0.48
CDR2-206ENST00000567406 HSPD1P10809 573 aaKnown RBP18.07■□□□□ 0.48
CDR2-206ENST00000567406 RAG1P15918 1043 aa18.07■□□□□ 0.48
CDR2-206ENST00000567406 BEX3Q00994 111 aa18.07■□□□□ 0.48
CDR2-206ENST00000567406 FAM133AQ8N9E0 248 aa18.07■□□□□ 0.48
CDR2-206ENST00000567406 NUP133Q8WUM0 1156 aa18.07■□□□□ 0.48
CDR2-206ENST00000567406 MOXD2PA6NHM9 499 aa18.06■□□□□ 0.48
CDR2-206ENST00000567406 DLL1O00548 723 aa18.06■□□□□ 0.48
CDR2-206ENST00000567406 KIAA0355O15063 1070 aa18.06■□□□□ 0.48
CDR2-206ENST00000567406 ORC4O43929 436 aa18.06■□□□□ 0.48
CDR2-206ENST00000567406 FDX1P10109 184 aa18.06■□□□□ 0.48
CDR2-206ENST00000567406 ALX1Q15699 326 aa18.06■□□□□ 0.48
CDR2-206ENST00000567406 GNASQ5JWF2 1037 aa18.06■□□□□ 0.48
CDR2-206ENST00000567406 TMEM63BQ5T3F8 832 aa18.06■□□□□ 0.48
CDR2-206ENST00000567406 NOL8Q76FK4 1167 aaKnown RBP18.06■□□□□ 0.48
CDR2-206ENST00000567406 EEPD1Q7L9B9 569 aa18.06■□□□□ 0.48
CDR2-206ENST00000567406 GPCPD1Q9NPB8 672 aa18.06■□□□□ 0.48
CDR2-206ENST00000567406 PDGFCQ9NRA1 345 aa18.06■□□□□ 0.48
CDR2-206ENST00000567406 DCDC2CA8MYV0 355 aa18.05■□□□□ 0.48
CDR2-206ENST00000567406 CTAGE5O15320 804 aa18.05■□□□□ 0.48
CDR2-206ENST00000567406 PLA2G6O60733 806 aa18.05■□□□□ 0.48
CDR2-206ENST00000567406 IGHDP01880 384 aa18.05■□□□□ 0.48
CDR2-206ENST00000567406 NOVP48745 357 aa18.05■□□□□ 0.48
CDR2-206ENST00000567406 GJA9P57773 515 aa18.05■□□□□ 0.48
CDR2-206ENST00000567406 NSMFQ6X4W1 530 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms