RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 LY9Q9HBG7 655 aa25.29■■□□□ 1.64
NME3-210ENST00000567271 GPHNQ9NQX3 736 aaPredicted RBP25.29■■□□□ 1.64
NME3-210ENST00000567271 FBXO40Q9UH90 709 aa25.29■■□□□ 1.64
NME3-210ENST00000567271 BRCA2P51587 3418 aa25.29■■□□□ 1.64
NME3-210ENST00000567271 POTEFA5A3E0 1075 aa25.28■■□□□ 1.64
NME3-210ENST00000567271 ICAM1P05362 532 aa25.28■■□□□ 1.64
NME3-210ENST00000567271 KRT32Q14532 448 aa25.28■■□□□ 1.64
NME3-210ENST00000567271 TKFCQ3LXA3 575 aa25.28■■□□□ 1.64
NME3-210ENST00000567271 ADCK5Q3MIX3 580 aa25.28■■□□□ 1.64
NME3-210ENST00000567271 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.28■■□□□ 1.64
NME3-210ENST00000567271 UNC93B1Q9H1C4 597 aa25.28■■□□□ 1.64
NME3-210ENST00000567271 CPVLQ9H3G5 476 aa25.28■■□□□ 1.64
NME3-210ENST00000567271 SLC5A4Q9NY91 659 aa25.28■■□□□ 1.64
NME3-210ENST00000567271 FLRT1Q9NZU1 646 aa25.28■■□□□ 1.64
NME3-210ENST00000567271 KIAA0100Q14667 2235 aaKnown RBP25.27■■□□□ 1.64
NME3-210ENST00000567271 SH2B2O14492 632 aaPredicted RBP25.27■■□□□ 1.64
NME3-210ENST00000567271 RGS19P49795 217 aa25.27■■□□□ 1.64
NME3-210ENST00000567271 TROAPQ12815 778 aa25.27■■□□□ 1.64
NME3-210ENST00000567271 RNF208Q9H0X6 261 aa25.27■■□□□ 1.64
NME3-210ENST00000567271 IGHA2P01877 340 aa25.26■■□□□ 1.63
NME3-210ENST00000567271 PGK2P07205 417 aa25.26■■□□□ 1.63
NME3-210ENST00000567271 MAP3K21Q5TCX8 1036 aa25.26■■□□□ 1.63
NME3-210ENST00000567271 CATIPQ7Z7H3 387 aa25.26■■□□□ 1.63
NME3-210ENST00000567271 TMTC2Q8N394 836 aa25.26■■□□□ 1.63
NME3-210ENST00000567271 STAG2Q8N3U4 1231 aa25.26■■□□□ 1.63
NME3-210ENST00000567271 HOMER2Q9NSB8 354 aa25.26■■□□□ 1.63
NME3-210ENST00000567271 RNF146Q9NTX7 359 aa25.26■■□□□ 1.63
NME3-210ENST00000567271 MAD2L2Q9UI95 211 aa25.26■■□□□ 1.63
NME3-210ENST00000567271 SNX14Q9Y5W7 946 aa25.26■■□□□ 1.63
NME3-210ENST00000567271 PALM3A6NDB9 673 aaPredicted RBP25.25■■□□□ 1.63
NME3-210ENST00000567271 ALAS1P13196 640 aa25.25■■□□□ 1.63
NME3-210ENST00000567271 LIFRP42702 1097 aa25.25■■□□□ 1.63
NME3-210ENST00000567271 EXOSC10Q01780 885 aaKnown RBP25.25■■□□□ 1.63
NME3-210ENST00000567271 GRM4Q14833 912 aa25.25■■□□□ 1.63
NME3-210ENST00000567271 ZNF792Q3KQV3 632 aa25.25■■□□□ 1.63
NME3-210ENST00000567271 OLFML2BQ68BL8 750 aa25.25■■□□□ 1.63
NME3-210ENST00000567271 ADGRF4Q8IZF3 695 aa25.25■■□□□ 1.63
NME3-210ENST00000567271 TRERF1Q96PN7 1200 aa25.25■■□□□ 1.63
NME3-210ENST00000567271 USP26Q9BXU7 913 aa25.25■■□□□ 1.63
NME3-210ENST00000567271 ACAD9Q9H845 621 aa25.25■■□□□ 1.63
NME3-210ENST00000567271 CCPG1Q9ULG6 757 aa25.25■■□□□ 1.63
NME3-210ENST00000567271 ZNFX1Q9P2E3 1918 aaKnown RBP25.24■■□□□ 1.63
NME3-210ENST00000567271 RPTORQ8N122 1335 aa25.24■■□□□ 1.63
NME3-210ENST00000567271 WDR19Q8NEZ3 1342 aa25.24■■□□□ 1.63
NME3-210ENST00000567271 KLRF2D3W0D1 207 aa25.24■■□□□ 1.63
NME3-210ENST00000567271 GJB1P08034 283 aa25.24■■□□□ 1.63
NME3-210ENST00000567271 PRKAR2AP13861 404 aaKnown RBP25.24■■□□□ 1.63
NME3-210ENST00000567271 CACNB2Q08289 660 aaPredicted RBP25.24■■□□□ 1.63
NME3-210ENST00000567271 MFSD14CQ5VZR4 134 aa25.24■■□□□ 1.63
NME3-210ENST00000567271 DHX32Q7L7V1 743 aaKnown RBP25.24■■□□□ 1.63
NME3-210ENST00000567271 ANKRD35Q8N283 1001 aa25.24■■□□□ 1.63
NME3-210ENST00000567271 DDX11Q96FC9 970 aa25.24■■□□□ 1.63
NME3-210ENST00000567271 MAML3Q96JK9 1138 aa25.24■■□□□ 1.63
NME3-210ENST00000567271 LRRC2Q9BYS8 371 aa25.24■■□□□ 1.63
NME3-210ENST00000567271 PNMA2Q9UL42 364 aa25.24■■□□□ 1.63
NME3-210ENST00000567271 DIS3Q9Y2L1 958 aaKnown RBP25.24■■□□□ 1.63
NME3-210ENST00000567271 HMGB1P09429 215 aaKnown RBP25.23■■□□□ 1.63
NME3-210ENST00000567271 EN2P19622 333 aaPredicted RBP25.23■■□□□ 1.63
NME3-210ENST00000567271 HMX1Q9NP08 348 aaPredicted RBP25.23■■□□□ 1.63
NME3-210ENST00000567271 PAK6Q9NQU5 681 aaPredicted RBP25.23■■□□□ 1.63
NME3-210ENST00000567271 RBBP6Q7Z6E9 1792 aaKnown RBP25.23■■□□□ 1.63
NME3-210ENST00000567271 DNAJC25-GNG10A0A024R161 153 aa25.22■■□□□ 1.63
NME3-210ENST00000567271 CCDC69A6NI79 296 aa25.22■■□□□ 1.63
NME3-210ENST00000567271 DDAH1O94760 285 aa25.22■■□□□ 1.63
NME3-210ENST00000567271 TAL1P17542 331 aaPredicted RBP25.22■■□□□ 1.63
NME3-210ENST00000567271 CYP2C19P33261 490 aa25.22■■□□□ 1.63
NME3-210ENST00000567271 MUM1L1Q5H9M0 696 aa25.22■■□□□ 1.63
NME3-210ENST00000567271 NFXL1Q6ZNB6 911 aa25.22■■□□□ 1.63
NME3-210ENST00000567271 ZNF654Q8IZM8 581 aa25.22■■□□□ 1.63
NME3-210ENST00000567271 MAP3K14Q99558 947 aa25.22■■□□□ 1.63
NME3-210ENST00000567271 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.22■■□□□ 1.631e-12■■□□□ 11.8
NME3-210ENST00000567271 JMJD4Q9H9V9 463 aa25.22■■□□□ 1.63
NME3-210ENST00000567271 GJA8P48165 433 aa25.21■■□□□ 1.63
NME3-210ENST00000567271 CDC37Q16543 378 aaPredicted RBP25.21■■□□□ 1.63
NME3-210ENST00000567271 NUP133Q8WUM0 1156 aa25.21■■□□□ 1.63
NME3-210ENST00000567271 VAT1LQ9HCJ6 419 aa25.21■■□□□ 1.63
NME3-210ENST00000567271 A1CFQ9NQ94 594 aaKnown RBP25.21■■□□□ 1.63
NME3-210ENST00000567271 DHX16O60231 1041 aaKnown RBP25.2■■□□□ 1.62
NME3-210ENST00000567271 SGMS1Q86VZ5 419 aa25.2■■□□□ 1.62
NME3-210ENST00000567271 TCEANC2Q96MN5 208 aa25.2■■□□□ 1.62
NME3-210ENST00000567271 JAKMIP1Q96N16 626 aaKnown RBP25.2■■□□□ 1.62
NME3-210ENST00000567271 MYL10Q9BUA6 226 aa25.2■■□□□ 1.62
NME3-210ENST00000567271 SMCHD1A6NHR9 2005 aa25.19■■□□□ 1.62
NME3-210ENST00000567271 SGPL1O95470 568 aa25.19■■□□□ 1.62
NME3-210ENST00000567271 U2AF1L4Q8WU68 220 aaKnown RBP25.19■■□□□ 1.62
NME3-210ENST00000567271 DEFB118Q96PH6 123 aa25.19■■□□□ 1.62
NME3-210ENST00000567271 SLC12A7Q9Y666 1083 aa25.19■■□□□ 1.62
NME3-210ENST00000567271 CPA1P15085 419 aa25.18■■□□□ 1.62
NME3-210ENST00000567271 CCND3P30281 292 aaPredicted RBP25.18■■□□□ 1.62
NME3-210ENST00000567271 SLC35G1Q2M3R5 365 aa25.18■■□□□ 1.62
NME3-210ENST00000567271 QRICH1Q2TAL8 776 aa25.18■■□□□ 1.62
NME3-210ENST00000567271 CTCFLQ8NI51 663 aaPredicted RBP25.18■■□□□ 1.62
NME3-210ENST00000567271 CLEC4DQ8WXI8 215 aa25.18■■□□□ 1.62
NME3-210ENST00000567271 MTMR8Q96EF0 704 aa25.18■■□□□ 1.62
NME3-210ENST00000567271 TINF2Q9BSI4 451 aa25.18■■□□□ 1.62
NME3-210ENST00000567271 RIOX1Q9H6W3 641 aa25.18■■□□□ 1.62
NME3-210ENST00000567271 PFASO15067 1338 aa25.17■■□□□ 1.62
NME3-210ENST00000567271 POTEB2H3BUK9 544 aa25.17■■□□□ 1.62
NME3-210ENST00000567271 CALM1P0DP23 149 aa25.17■■□□□ 1.62
NME3-210ENST00000567271 CALM2P0DP24 149 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms