RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 SH3RF1Q7Z6J0 888 aa17.77■□□□□ 0.44
RNF40-209ENST00000566703 PCSK9Q8NBP7 692 aaKnown RBP17.77■□□□□ 0.44
RNF40-209ENST00000566703 ACAD9Q9H845 621 aa17.77■□□□□ 0.44
RNF40-209ENST00000566703 SPC25Q9HBM1 224 aa17.77■□□□□ 0.44
RNF40-209ENST00000566703 STARD7Q9NQZ5 370 aa17.77■□□□□ 0.44
RNF40-209ENST00000566703 ZHX1Q9UKY1 873 aaPredicted RBP17.77■□□□□ 0.44
RNF40-209ENST00000566703 ELP1O95163 1332 aa17.76■□□□□ 0.43
RNF40-209ENST00000566703 SYNRGQ9UMZ2 1314 aa17.76■□□□□ 0.43
RNF40-209ENST00000566703 MCCP23508 829 aa17.76■□□□□ 0.43
RNF40-209ENST00000566703 PDE1AP54750 535 aa17.76■□□□□ 0.43
RNF40-209ENST00000566703 NKX3-2P78367 333 aa17.76■□□□□ 0.43
RNF40-209ENST00000566703 KCNA10Q16322 511 aa17.76■□□□□ 0.43
RNF40-209ENST00000566703 FAM133AQ8N9E0 248 aa17.76■□□□□ 0.43
RNF40-209ENST00000566703 FGD4Q96M96 766 aa17.76■□□□□ 0.43
RNF40-209ENST00000566703 UPF3AQ9H1J1 476 aaKnown RBP17.76■□□□□ 0.43
RNF40-209ENST00000566703 IL17RBQ9NRM6 502 aa17.76■□□□□ 0.43
RNF40-209ENST00000566703 STX8Q9UNK0 236 aa17.76■□□□□ 0.43
RNF40-209ENST00000566703 ZNF536O15090 1300 aa17.75■□□□□ 0.43
RNF40-209ENST00000566703 DCDC2CA8MYV0 355 aa17.75■□□□□ 0.43
RNF40-209ENST00000566703 ORC4O43929 436 aa17.75■□□□□ 0.43
RNF40-209ENST00000566703 GJA9P57773 515 aa17.75■□□□□ 0.43
RNF40-209ENST00000566703 CCDC144BQ3MJ40 725 aa17.75■□□□□ 0.43
RNF40-209ENST00000566703 CCDC129Q6ZRS4 1044 aa17.75■□□□□ 0.43
RNF40-209ENST00000566703 ARMCX2Q7L311 632 aa17.75■□□□□ 0.43
RNF40-209ENST00000566703 GLT1D1Q96MS3 346 aa17.75■□□□□ 0.43
RNF40-209ENST00000566703 PLXNA1Q9UIW2 1896 aa17.75■□□□□ 0.43
RNF40-209ENST00000566703 ASB14A6NK59 587 aa17.74■□□□□ 0.43
RNF40-209ENST00000566703 RAG1P15918 1043 aa17.74■□□□□ 0.43
RNF40-209ENST00000566703 SMAD3P84022 425 aaKnown RBP17.74■□□□□ 0.43
RNF40-209ENST00000566703 CTDSPL2Q05D32 466 aa17.74■□□□□ 0.43
RNF40-209ENST00000566703 IKQ13123 557 aaPredicted RBP17.74■□□□□ 0.43
RNF40-209ENST00000566703 MCMDC2Q4G0Z9 681 aa17.74■□□□□ 0.43
RNF40-209ENST00000566703 C9orf50Q5SZB4 431 aa17.74■□□□□ 0.43
RNF40-209ENST00000566703 CCDC144CPQ8IYA2 1237 aa17.74■□□□□ 0.43
RNF40-209ENST00000566703 LENG1Q96BZ8 264 aaPredicted RBP17.74■□□□□ 0.43
RNF40-209ENST00000566703 AGBL1Q96MI9 1066 aa17.74■□□□□ 0.43
RNF40-209ENST00000566703 TRERF1Q96PN7 1200 aa17.74■□□□□ 0.43
RNF40-209ENST00000566703 CRBNQ96SW2 442 aa17.74■□□□□ 0.43
RNF40-209ENST00000566703 KATNBL1Q9H079 304 aa17.74■□□□□ 0.43
RNF40-209ENST00000566703 RNF146Q9NTX7 359 aa17.74■□□□□ 0.43
RNF40-209ENST00000566703 TMEM39AQ9NV64 488 aa17.74■□□□□ 0.43
RNF40-209ENST00000566703 ISY1Q9ULR0 285 aaKnown RBP17.74■□□□□ 0.43
RNF40-209ENST00000566703 MROH7Q68CQ1 1323 aa17.73■□□□□ 0.43
RNF40-209ENST00000566703 SZT2Q5T011 3432 aa17.73■□□□□ 0.43
RNF40-209ENST00000566703 MYH4Q9Y623 1939 aa17.73■□□□□ 0.43
RNF40-209ENST00000566703 RANBP6O60518 1105 aaKnown RBP17.73■□□□□ 0.43
RNF40-209ENST00000566703 PQBP1O60828 265 aaKnown RBP17.73■□□□□ 0.43
RNF40-209ENST00000566703 FGAP02671 866 aa17.73■□□□□ 0.43
RNF40-209ENST00000566703 C6orf222P0C671 652 aaPredicted RBP17.73■□□□□ 0.43
RNF40-209ENST00000566703 CDK7P50613 346 aa17.73■□□□□ 0.43
RNF40-209ENST00000566703 FAAP100Q0VG06 881 aa17.73■□□□□ 0.43
RNF40-209ENST00000566703 ZNF697Q5TEC3 545 aa17.73■□□□□ 0.43
RNF40-209ENST00000566703 VPS53Q5VIR6 699 aa17.73■□□□□ 0.43
RNF40-209ENST00000566703 DCAF4Q8WV16 495 aa17.73■□□□□ 0.43
RNF40-209ENST00000566703 A1CFQ9NQ94 594 aaKnown RBP17.73■□□□□ 0.43
RNF40-209ENST00000566703 INCENPQ9NQS7 918 aa17.73■□□□□ 0.43
RNF40-209ENST00000566703 TCP11L1Q9NUJ3 509 aa17.73■□□□□ 0.43
RNF40-209ENST00000566703 PRR12Q9ULL5 1215 aa17.73■□□□□ 0.43
RNF40-209ENST00000566703 DLL1O00548 723 aa17.72■□□□□ 0.43
RNF40-209ENST00000566703 ASGR1P07306 291 aa17.72■□□□□ 0.43
RNF40-209ENST00000566703 ITGB8P26012 769 aa17.72■□□□□ 0.43
RNF40-209ENST00000566703 CNTN2Q02246 1040 aa17.72■□□□□ 0.43
RNF40-209ENST00000566703 GNASQ5JWF2 1037 aa17.72■□□□□ 0.43
RNF40-209ENST00000566703 BTNL9Q6UXG8 535 aa17.72■□□□□ 0.43
RNF40-209ENST00000566703 KCTD1Q719H9 257 aa17.72■□□□□ 0.43
RNF40-209ENST00000566703 HOMER2Q9NSB8 354 aa17.72■□□□□ 0.43
RNF40-209ENST00000566703 LTBP2Q14767 1821 aa17.72■□□□□ 0.43
RNF40-209ENST00000566703 SOWAHBA6NEL2 793 aa17.71■□□□□ 0.43
RNF40-209ENST00000566703 PCP11498 1178 aaKnown RBP17.71■□□□□ 0.43
RNF40-209ENST00000566703 ALAS1P13196 640 aa17.71■□□□□ 0.43
RNF40-209ENST00000566703 TNFAIP2Q03169 654 aa17.71■□□□□ 0.43
RNF40-209ENST00000566703 TTC14Q96N46 770 aa17.71■□□□□ 0.43
RNF40-209ENST00000566703 GUCD1Q96NT3 240 aa17.71■□□□□ 0.43
RNF40-209ENST00000566703 PNMA2Q9UL42 364 aa17.71■□□□□ 0.43
RNF40-209ENST00000566703 ZMYM6O95789 1325 aa17.71■□□□□ 0.42
RNF40-209ENST00000566703 A0A0U1RQG5 324 aaPredicted RBP17.7■□□□□ 0.42
RNF40-209ENST00000566703 MYADML2A6NDP7 307 aa17.7■□□□□ 0.42
RNF40-209ENST00000566703 ARVCFO00192 962 aa17.7■□□□□ 0.42
RNF40-209ENST00000566703 ADCY6O43306 1168 aa17.7■□□□□ 0.42
RNF40-209ENST00000566703 NMT2O60551 498 aa17.7■□□□□ 0.42
RNF40-209ENST00000566703 TIMP1P01033 207 aa17.7■□□□□ 0.42
RNF40-209ENST00000566703 HSPD1P10809 573 aaKnown RBP17.7■□□□□ 0.42
RNF40-209ENST00000566703 TOP1P11387 765 aaKnown RBP17.7■□□□□ 0.42
RNF40-209ENST00000566703 FPGSQ05932 587 aa17.7■□□□□ 0.42
RNF40-209ENST00000566703 IQSEC1Q6DN90 963 aa17.7■□□□□ 0.42
RNF40-209ENST00000566703 VTI1AQ96AJ9 217 aa17.7■□□□□ 0.42
RNF40-209ENST00000566703 RANBP17Q9H2T7 1088 aaKnown RBP17.7■□□□□ 0.42
RNF40-209ENST00000566703 SEMA6BQ9H3T3 888 aa17.7■□□□□ 0.42
RNF40-209ENST00000566703 CYP39A1Q9NYL5 469 aa17.7■□□□□ 0.42
RNF40-209ENST00000566703 TBX21Q9UL17 535 aa17.7■□□□□ 0.42
RNF40-209ENST00000566703 Q9Y3F1 56 aa17.7■□□□□ 0.42
RNF40-209ENST00000566703 TMEM265A0A087WTH1 108 aa17.69■□□□□ 0.42
RNF40-209ENST00000566703 LOC102724159A0A0B4J2E5 919 aa17.69■□□□□ 0.42
RNF40-209ENST00000566703 CTAGE5O15320 804 aa17.69■□□□□ 0.42
RNF40-209ENST00000566703 CABYRO75952 493 aa17.69■□□□□ 0.42
RNF40-209ENST00000566703 ICAM1P05362 532 aa17.69■□□□□ 0.42
RNF40-209ENST00000566703 NT5C2P49902 561 aa17.69■□□□□ 0.42
RNF40-209ENST00000566703 EPHB4P54760 987 aa17.69■□□□□ 0.42
RNF40-209ENST00000566703 PWP2Q15269 919 aaKnown RBP17.69■□□□□ 0.42
RNF40-209ENST00000566703 CCDC174Q6PII3 467 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms