RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 RANBP6O60518 1105 aaKnown RBP32.73■■■□□ 2.83
UBFD1-206ENST00000566669 CLTBP09497 229 aa32.73■■■□□ 2.83
UBFD1-206ENST00000566669 PCP11498 1178 aaKnown RBP32.73■■■□□ 2.83
UBFD1-206ENST00000566669 MCCP23508 829 aa32.73■■■□□ 2.83
UBFD1-206ENST00000566669 CST5P28325 142 aaPredicted RBP32.73■■■□□ 2.83
UBFD1-206ENST00000566669 NOVP48745 357 aa32.73■■■□□ 2.83
UBFD1-206ENST00000566669 CCDC129Q6ZRS4 1044 aa32.73■■■□□ 2.83
UBFD1-206ENST00000566669 SMCHD1A6NHR9 2005 aa32.73■■■□□ 2.83
UBFD1-206ENST00000566669 SYNRGQ9UMZ2 1314 aa32.73■■■□□ 2.83
UBFD1-206ENST00000566669 ACLYP53396 1101 aa32.72■■■□□ 2.83
UBFD1-206ENST00000566669 MFAP1P55081 439 aaKnown RBP32.72■■■□□ 2.83
UBFD1-206ENST00000566669 KLHDC9Q8NEP7 349 aa32.72■■■□□ 2.83
UBFD1-206ENST00000566669 STARD7Q9NQZ5 370 aa32.72■■■□□ 2.83
UBFD1-206ENST00000566669 MTMR10Q9NXD2 777 aa32.72■■■□□ 2.83
UBFD1-206ENST00000566669 ASB14A6NK59 587 aa32.71■■■□□ 2.83
UBFD1-206ENST00000566669 POTEB2H3BUK9 544 aa32.71■■■□□ 2.83
UBFD1-206ENST00000566669 NT5C2P49902 561 aa32.71■■■□□ 2.83
UBFD1-206ENST00000566669 CTDSPL2Q05D32 466 aa32.71■■■□□ 2.83
UBFD1-206ENST00000566669 ANKRD33Q7Z3H0 272 aa32.71■■■□□ 2.83
UBFD1-206ENST00000566669 SLC17A8Q8NDX2 589 aa32.71■■■□□ 2.83
UBFD1-206ENST00000566669 DCAF4Q8WV16 495 aa32.71■■■□□ 2.83
UBFD1-206ENST00000566669 IL17RBQ9NRM6 502 aa32.71■■■□□ 2.83
UBFD1-206ENST00000566669 PNMA2Q9UL42 364 aa32.71■■■□□ 2.83
UBFD1-206ENST00000566669 ELP1O95163 1332 aa32.71■■■□□ 2.83
UBFD1-206ENST00000566669 MROH7Q68CQ1 1323 aa32.71■■■□□ 2.83
UBFD1-206ENST00000566669 DCDC2CA8MYV0 355 aa32.7■■■□□ 2.83
UBFD1-206ENST00000566669 ARMCX2Q7L311 632 aa32.7■■■□□ 2.83
UBFD1-206ENST00000566669 BADQ92934 168 aa32.7■■■□□ 2.83
UBFD1-206ENST00000566669 GLT1D1Q96MS3 346 aa32.7■■■□□ 2.83
UBFD1-206ENST00000566669 RWDD1Q9H446 243 aaPredicted RBP32.7■■■□□ 2.83
UBFD1-206ENST00000566669 HOMER2Q9NSB8 354 aa32.7■■■□□ 2.83
UBFD1-206ENST00000566669 RNF146Q9NTX7 359 aa32.7■■■□□ 2.83
UBFD1-206ENST00000566669 LTBP2Q14767 1821 aa32.7■■■□□ 2.82
UBFD1-206ENST00000566669 KIAA0355O15063 1070 aa32.69■■■□□ 2.82
UBFD1-206ENST00000566669 FAM133AQ8N9E0 248 aa32.69■■■□□ 2.82
UBFD1-206ENST00000566669 TCP11L1Q9NUJ3 509 aa32.69■■■□□ 2.82
UBFD1-206ENST00000566669 CCDC144BQ3MJ40 725 aa32.68■■■□□ 2.82
UBFD1-206ENST00000566669 VPS53Q5VIR6 699 aa32.68■■■□□ 2.82
UBFD1-206ENST00000566669 UPF3AQ9H1J1 476 aaKnown RBP32.68■■■□□ 2.82
UBFD1-206ENST00000566669 A1CFQ9NQ94 594 aaKnown RBP32.68■■■□□ 2.82
UBFD1-206ENST00000566669 ZNF536O15090 1300 aa32.68■■■□□ 2.82
UBFD1-206ENST00000566669 TRIM43BA6NCK2 446 aa32.67■■■□□ 2.82
UBFD1-206ENST00000566669 FGAP02671 866 aa32.67■■■□□ 2.82
UBFD1-206ENST00000566669 GJA9P57773 515 aa32.67■■■□□ 2.82
UBFD1-206ENST00000566669 KCNA10Q16322 511 aa32.67■■■□□ 2.82
UBFD1-206ENST00000566669 CCSAPQ6IQ19 270 aaPredicted RBP32.67■■■□□ 2.82
UBFD1-206ENST00000566669 Q7L0L9 218 aa32.67■■■□□ 2.82
UBFD1-206ENST00000566669 CCDC144CPQ8IYA2 1237 aa32.67■■■□□ 2.82
UBFD1-206ENST00000566669 TRIM43Q96BQ3 446 aaPredicted RBP32.67■■■□□ 2.82
UBFD1-206ENST00000566669 FGD4Q96M96 766 aa32.67■■■□□ 2.82
UBFD1-206ENST00000566669 TRERF1Q96PN7 1200 aa32.67■■■□□ 2.82
UBFD1-206ENST00000566669 PRR12Q9ULL5 1215 aa32.67■■■□□ 2.82
UBFD1-206ENST00000566669 COL6A3P12111 3177 aa32.67■■■□□ 2.82
UBFD1-206ENST00000566669 PQBP1O60828 265 aaKnown RBP32.66■■■□□ 2.82
UBFD1-206ENST00000566669 C6orf222P0C671 652 aaPredicted RBP32.66■■■□□ 2.82
UBFD1-206ENST00000566669 RAG1P15918 1043 aa32.66■■■□□ 2.82
UBFD1-206ENST00000566669 NKX3-2P78367 333 aa32.66■■■□□ 2.82
UBFD1-206ENST00000566669 KCTD1Q719H9 257 aa32.66■■■□□ 2.82
UBFD1-206ENST00000566669 AGBL1Q96MI9 1066 aa32.66■■■□□ 2.82
UBFD1-206ENST00000566669 TOMM22Q9NS69 142 aa32.66■■■□□ 2.82
UBFD1-206ENST00000566669 TMEM39AQ9NV64 488 aa32.66■■■□□ 2.82
UBFD1-206ENST00000566669 TRIM6-TRIM34B2RNG4 842 aa32.65■■■□□ 2.82
UBFD1-206ENST00000566669 TOP1P11387 765 aaKnown RBP32.65■■■□□ 2.82
UBFD1-206ENST00000566669 SH3RF1Q7Z6J0 888 aa32.65■■■□□ 2.82
UBFD1-206ENST00000566669 SMC5Q8IY18 1101 aa32.65■■■□□ 2.82
UBFD1-206ENST00000566669 LENG1Q96BZ8 264 aaPredicted RBP32.65■■■□□ 2.82
UBFD1-206ENST00000566669 TTC14Q96N46 770 aa32.65■■■□□ 2.82
UBFD1-206ENST00000566669 LOC102724159A0A0B4J2E5 919 aa32.64■■■□□ 2.82
UBFD1-206ENST00000566669 NMT2O60551 498 aa32.64■■■□□ 2.82
UBFD1-206ENST00000566669 HSPD1P10809 573 aaKnown RBP32.64■■■□□ 2.82
UBFD1-206ENST00000566669 ALAS1P13196 640 aa32.64■■■□□ 2.82
UBFD1-206ENST00000566669 PWP2Q15269 919 aaKnown RBP32.64■■■□□ 2.82
UBFD1-206ENST00000566669 SHHQ15465 462 aa32.64■■■□□ 2.82
UBFD1-206ENST00000566669 BTNL9Q6UXG8 535 aa32.64■■■□□ 2.82
UBFD1-206ENST00000566669 FAM227BQ96M60 508 aa32.64■■■□□ 2.82
UBFD1-206ENST00000566669 SEZ6LQ9BYH1 1024 aa32.64■■■□□ 2.82
UBFD1-206ENST00000566669 RNF41Q9H4P4 317 aaPredicted RBP32.64■■■□□ 2.82
UBFD1-206ENST00000566669 LAMA2P24043 3122 aaKnown RBP32.63■■■□□ 2.81
UBFD1-206ENST00000566669 CCDC171Q6TFL3 1326 aa32.63■■■□□ 2.81
UBFD1-206ENST00000566669 A0A0D9SFI3 127 aa32.63■■■□□ 2.81
UBFD1-206ENST00000566669 ICAM1P05362 532 aa32.63■■■□□ 2.81
UBFD1-206ENST00000566669 SMAD3P84022 425 aaKnown RBP32.63■■■□□ 2.81
UBFD1-206ENST00000566669 CCDC96Q2M329 555 aa32.63■■■□□ 2.81
UBFD1-206ENST00000566669 GNASQ5JWF2 1037 aa32.63■■■□□ 2.81
UBFD1-206ENST00000566669 ZNF697Q5TEC3 545 aa32.63■■■□□ 2.81
UBFD1-206ENST00000566669 CCPG1Q9ULG6 757 aa32.63■■■□□ 2.81
UBFD1-206ENST00000566669 CNTN2Q02246 1040 aa32.62■■■□□ 2.81
UBFD1-206ENST00000566669 LNPKQ9C0E8 428 aa32.62■■■□□ 2.81
UBFD1-206ENST00000566669 KATNBL1Q9H079 304 aa32.62■■■□□ 2.81
UBFD1-206ENST00000566669 INCENPQ9NQS7 918 aa32.62■■■□□ 2.81
UBFD1-206ENST00000566669 A0A0U1RQG5 324 aaPredicted RBP32.61■■■□□ 2.81
UBFD1-206ENST00000566669 CABYRO75952 493 aa32.61■■■□□ 2.81
UBFD1-206ENST00000566669 ASGR1P07306 291 aa32.61■■■□□ 2.81
UBFD1-206ENST00000566669 TNFAIP2Q03169 654 aa32.61■■■□□ 2.81
UBFD1-206ENST00000566669 FAAP100Q0VG06 881 aa32.61■■■□□ 2.81
UBFD1-206ENST00000566669 CCDC174Q6PII3 467 aa32.61■■■□□ 2.81
UBFD1-206ENST00000566669 MFSD6Q6ZSS7 791 aa32.61■■■□□ 2.81
UBFD1-206ENST00000566669 RANBP17Q9H2T7 1088 aaKnown RBP32.61■■■□□ 2.81
UBFD1-206ENST00000566669 OSBPL3Q9H4L5 887 aa32.61■■■□□ 2.81
UBFD1-206ENST00000566669 CYP39A1Q9NYL5 469 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms