RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 SRBD1Q8N5C6 995 aaKnown RBP9.51□□□□□ -0.89
CDH13-208ENST00000566333 MB21D1Q8N884 522 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 CTCFLQ8NI51 663 aaPredicted RBP9.51□□□□□ -0.89
CDH13-208ENST00000566333 CHURC1Q8WUH1 139 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 ZNF274Q96GC6 653 aaPredicted RBP9.51□□□□□ -0.89
CDH13-208ENST00000566333 ARHGAP39Q9C0H5 1083 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 PORCNQ9H237 461 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 RIOX1Q9H6W3 641 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 JMJD4Q9H9V9 463 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 NCOA5Q9HCD5 579 aaKnown RBP9.51□□□□□ -0.89
CDH13-208ENST00000566333 HOXC10Q9NYD6 342 aa9.51□□□□□ -0.89
CDH13-208ENST00000566333 LACTBP83111 547 aaPredicted RBP9.5□□□□□ -0.89
CDH13-208ENST00000566333 SCRN1Q12765 414 aa9.5□□□□□ -0.89
CDH13-208ENST00000566333 ANKRD1Q15327 319 aa9.5□□□□□ -0.89
CDH13-208ENST00000566333 NTRK3Q16288 839 aa9.5□□□□□ -0.89
CDH13-208ENST00000566333 CDC37Q16543 378 aaPredicted RBP9.5□□□□□ -0.89
CDH13-208ENST00000566333 ME3Q16798 604 aa9.5□□□□□ -0.89
CDH13-208ENST00000566333 QRICH1Q2TAL8 776 aa9.5□□□□□ -0.89
CDH13-208ENST00000566333 Q3C1V9 767 aa9.5□□□□□ -0.89
CDH13-208ENST00000566333 ZNF296Q8WUU4 475 aaPredicted RBP9.5□□□□□ -0.89
CDH13-208ENST00000566333 GTF3C6Q969F1 213 aa9.5□□□□□ -0.89
CDH13-208ENST00000566333 BEGAINQ9BUH8 593 aa9.5□□□□□ -0.89
CDH13-208ENST00000566333 MOV10L1Q9BXT6 1211 aaKnown RBP9.5□□□□□ -0.89
CDH13-208ENST00000566333 SPATC1LQ9H0A9 340 aa9.5□□□□□ -0.89
CDH13-208ENST00000566333 RAVER2Q9HCJ3 691 aaKnown RBP9.5□□□□□ -0.89
CDH13-208ENST00000566333 RBM28Q9NW13 759 aaKnown RBP9.5□□□□□ -0.89
CDH13-208ENST00000566333 MYH7BA7E2Y1 1941 aa9.5□□□□□ -0.89
CDH13-208ENST00000566333 KIAA1217Q5T5P2 1943 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 PFKFB2O60825 505 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 ICAM1P05362 532 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 ADD1P35611 737 aaKnown RBP9.49□□□□□ -0.89
CDH13-208ENST00000566333 OAZ1P54368 228 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 CCT2P78371 535 aaKnown RBP9.49□□□□□ -0.89
CDH13-208ENST00000566333 STK3Q13188 491 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 SNRNP48Q6IEG0 339 aaKnown RBP9.49□□□□□ -0.89
CDH13-208ENST00000566333 CCDC174Q6PII3 467 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 SYNE3Q6ZMZ3 975 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDH13-208ENST00000566333 POTEDQ86YR6 584 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 GPRC5AQ8NFJ5 357 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 AGBL1Q96MI9 1066 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 PIGSQ96S52 555 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 TEX13BQ9BXU2 312 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 EFCC1Q9HA90 598 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 NAP1L2Q9ULW6 460 aaPredicted RBP9.49□□□□□ -0.89
CDH13-208ENST00000566333 RIPK3Q9Y572 518 aa9.49□□□□□ -0.89
CDH13-208ENST00000566333 hCG_1642624A0A1W2PR95 340 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 OPLAHO14841 1288 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 ZBTB5O15062 677 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 ST18O60284 1047 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 FKTNO75072 461 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 ZBED4O75132 1171 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 CTDNEP1O95476 244 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 FDX1P10109 184 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 IFNAR1P17181 557 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 SMARCA1P28370 1054 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 GNAQP50148 359 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 SP3Q02447 781 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 PPP2R5BQ15173 497 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 HOMER1Q86YM7 354 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 RIOX2Q8IUF8 465 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 NECAB1Q8N987 351 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 SHCBP1Q8NEM2 672 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 CD99L2Q8TCZ2 262 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 SHISA4Q96DD7 197 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 TRIM47Q96LD4 638 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 LZTS2Q9BRK4 669 aa9.48□□□□□ -0.89
CDH13-208ENST00000566333 MYH15Q9Y2K3 1946 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 CCDC196A0A1B0GTZ2 297 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 DHX16O60231 1041 aaKnown RBP9.47□□□□□ -0.89
CDH13-208ENST00000566333 DTNBO60941 627 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 PPFIA3O75145 1194 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 ERCC3P19447 782 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 STAT3P40763 770 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 CTCFP49711 727 aaPredicted RBP9.47□□□□□ -0.89
CDH13-208ENST00000566333 LBX1P52954 281 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 PLS1Q14651 629 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 PKN1Q16512 942 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 MUM1L1Q5H9M0 696 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 TYW1BQ6NUM6 668 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 CPXCR1Q8N123 301 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 CCDC82Q8N4S0 544 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 IL27Q8NEV9 243 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 PHKBQ93100 1093 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 VAT1LQ9HCJ6 419 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 HOMER2Q9NSB8 354 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 CCPG1Q9ULG6 757 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 LIMCH1Q9UPQ0 1083 aa9.47□□□□□ -0.89
CDH13-208ENST00000566333 PNMA6FA0A0J9YX94 578 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 NFIBO00712 420 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 ECM2O94769 699 aaPredicted RBP9.46□□□□□ -0.9
CDH13-208ENST00000566333 MAPK4P31152 587 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 CCNA1P78396 465 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 GRB14Q14449 540 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 USH1GQ495M9 461 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 WWC2Q6AWC2 1192 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 GPR142Q7Z601 462 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 NSUN7Q8NE18 718 aaKnown RBP9.46□□□□□ -0.9
CDH13-208ENST00000566333 CLEC4DQ8WXI8 215 aa9.46□□□□□ -0.9
CDH13-208ENST00000566333 PIBF1Q8WXW3 757 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms