RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 RCSD1Q6JBY9 416 aa21.68■■□□□ 1.06
USB1-213ENST00000566292 ANKRD35Q8N283 1001 aa21.68■■□□□ 1.06
USB1-213ENST00000566292 HOMER2Q9NSB8 354 aa21.68■■□□□ 1.06
USB1-213ENST00000566292 ZMYM6O95789 1325 aa21.68■■□□□ 1.06
USB1-213ENST00000566292 CCDC171Q6TFL3 1326 aa21.68■■□□□ 1.06
USB1-213ENST00000566292 LAMA4Q16363 1823 aa21.68■■□□□ 1.06
USB1-213ENST00000566292 LCTP09848 1927 aa21.68■■□□□ 1.06
USB1-213ENST00000566292 IKQ13123 557 aaPredicted RBP21.67■■□□□ 1.06
USB1-213ENST00000566292 ZNF467Q7Z7K2 595 aaPredicted RBP21.67■■□□□ 1.06
USB1-213ENST00000566292 AGBL1Q96MI9 1066 aa21.67■■□□□ 1.06
USB1-213ENST00000566292 OSBPL3Q9H4L5 887 aa21.67■■□□□ 1.06
USB1-213ENST00000566292 PHF24Q9UPV7 400 aa21.67■■□□□ 1.06
USB1-213ENST00000566292 ADAMTS4O75173 837 aa21.66■■□□□ 1.06
USB1-213ENST00000566292 HAND2P61296 217 aa21.66■■□□□ 1.06
USB1-213ENST00000566292 LRIT3Q3SXY7 679 aa21.66■■□□□ 1.06
USB1-213ENST00000566292 TRIM60Q495X7 471 aa21.66■■□□□ 1.06
USB1-213ENST00000566292 RRP12Q5JTH9 1297 aaKnown RBP21.66■■□□□ 1.06
USB1-213ENST00000566292 TOMM22Q9NS69 142 aa21.66■■□□□ 1.06
USB1-213ENST00000566292 MTMR7Q9Y216 660 aa21.66■■□□□ 1.06
USB1-213ENST00000566292 SDSP20132 328 aa21.65■■□□□ 1.06
USB1-213ENST00000566292 SNAP25P60880 206 aa21.65■■□□□ 1.06
USB1-213ENST00000566292 RNF180Q86T96 592 aa21.65■■□□□ 1.06
USB1-213ENST00000566292 ACAD9Q9H845 621 aa21.65■■□□□ 1.06
USB1-213ENST00000566292 RNF146Q9NTX7 359 aa21.65■■□□□ 1.06
USB1-213ENST00000566292 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.65■■□□□ 1.06
USB1-213ENST00000566292 ZHX1Q9UKY1 873 aaPredicted RBP21.65■■□□□ 1.06
USB1-213ENST00000566292 FAM184BQ9ULE4 1060 aa21.65■■□□□ 1.06
USB1-213ENST00000566292 PRR12Q9ULL5 1215 aa21.65■■□□□ 1.06
USB1-213ENST00000566292 LRRC37A2A6NM11 1700 aa21.65■■□□□ 1.06
USB1-213ENST00000566292 SYNRGQ9UMZ2 1314 aa21.64■■□□□ 1.05
USB1-213ENST00000566292 ADCY6O43306 1168 aa21.64■■□□□ 1.05
USB1-213ENST00000566292 CNTN2Q02246 1040 aa21.64■■□□□ 1.05
USB1-213ENST00000566292 C1orf53Q5VUE5 145 aa21.64■■□□□ 1.05
USB1-213ENST00000566292 CCDC174Q6PII3 467 aa21.64■■□□□ 1.05
USB1-213ENST00000566292 A1CFQ9NQ94 594 aaKnown RBP21.64■■□□□ 1.05
USB1-213ENST00000566292 TCP11L1Q9NUJ3 509 aa21.64■■□□□ 1.05
USB1-213ENST00000566292 ACVR2BQ13705 512 aa21.63■■□□□ 1.05
USB1-213ENST00000566292 CCDC96Q2M329 555 aa21.63■■□□□ 1.05
USB1-213ENST00000566292 TKFCQ3LXA3 575 aa21.63■■□□□ 1.05
USB1-213ENST00000566292 TTBK2Q6IQ55 1244 aa21.63■■□□□ 1.05
USB1-213ENST00000566292 ARMCX2Q7L311 632 aa21.63■■□□□ 1.05
USB1-213ENST00000566292 TBC1D10CQ8IV04 446 aa21.63■■□□□ 1.05
USB1-213ENST00000566292 FAM133AQ8N9E0 248 aa21.63■■□□□ 1.05
USB1-213ENST00000566292 DCAF4Q8WV16 495 aa21.63■■□□□ 1.05
USB1-213ENST00000566292 TRERF1Q96PN7 1200 aa21.63■■□□□ 1.05
USB1-213ENST00000566292 LBHD1Q9BQE6 289 aaPredicted RBP21.63■■□□□ 1.05
USB1-213ENST00000566292 TMEM47Q9BQJ4 181 aa21.63■■□□□ 1.05
USB1-213ENST00000566292 PDLIM7Q9NR12 457 aa21.63■■□□□ 1.05
USB1-213ENST00000566292 PRKAG2Q9UGJ0 569 aa21.63■■□□□ 1.05
USB1-213ENST00000566292 A0A1W2PQ45 241 aaPredicted RBP21.62■■□□□ 1.05
USB1-213ENST00000566292 A0A1W2PQY0 241 aa21.62■■□□□ 1.05
USB1-213ENST00000566292 TOP1P11387 765 aaKnown RBP21.62■■□□□ 1.05
USB1-213ENST00000566292 ALAS1P13196 640 aa21.62■■□□□ 1.05
USB1-213ENST00000566292 AKNAD1Q5T1N1 836 aa21.62■■□□□ 1.05
USB1-213ENST00000566292 SH3RF1Q7Z6J0 888 aa21.62■■□□□ 1.05
USB1-213ENST00000566292 CCDC144CPQ8IYA2 1237 aa21.62■■□□□ 1.05
USB1-213ENST00000566292 KLHDC9Q8NEP7 349 aa21.62■■□□□ 1.05
USB1-213ENST00000566292 KATNBL1Q9H079 304 aa21.62■■□□□ 1.05
USB1-213ENST00000566292 ABHD16BQ9H3Z7 469 aa21.62■■□□□ 1.05
USB1-213ENST00000566292 PRDM5Q9NQX1 630 aaPredicted RBP21.62■■□□□ 1.05
USB1-213ENST00000566292 MYADML2A6NDP7 307 aa21.61■■□□□ 1.05
USB1-213ENST00000566292 SOWAHBA6NEL2 793 aa21.61■■□□□ 1.05
USB1-213ENST00000566292 POTEB2H3BUK9 544 aa21.61■■□□□ 1.05
USB1-213ENST00000566292 DUSP11O75319 330 aaKnown RBP21.61■■□□□ 1.05
USB1-213ENST00000566292 MFAP1P55081 439 aaKnown RBP21.61■■□□□ 1.05
USB1-213ENST00000566292 IRX5P78411 483 aaPredicted RBP21.61■■□□□ 1.05
USB1-213ENST00000566292 TLE2Q04725 743 aa21.61■■□□□ 1.05
USB1-213ENST00000566292 MUM1L1Q5H9M0 696 aa21.61■■□□□ 1.05
USB1-213ENST00000566292 CCSAPQ6IQ19 270 aaPredicted RBP21.61■■□□□ 1.05
USB1-213ENST00000566292 BTNL9Q6UXG8 535 aa21.61■■□□□ 1.05
USB1-213ENST00000566292 TSEN34Q9BSV6 310 aaKnown RBP21.61■■□□□ 1.05
USB1-213ENST00000566292 ASTN1O14525 1302 aa21.6■■□□□ 1.05
USB1-213ENST00000566292 TRIM43BA6NCK2 446 aa21.6■■□□□ 1.05
USB1-213ENST00000566292 SLC16A2P36021 539 aa21.6■■□□□ 1.05
USB1-213ENST00000566292 CCDC144BQ3MJ40 725 aa21.6■■□□□ 1.05
USB1-213ENST00000566292 GPR153Q6NV75 609 aa21.6■■□□□ 1.05
USB1-213ENST00000566292 CWC27Q6UX04 472 aaKnown RBP21.6■■□□□ 1.05
USB1-213ENST00000566292 MFSD6Q6ZSS7 791 aa21.6■■□□□ 1.05
USB1-213ENST00000566292 TRIM43Q96BQ3 446 aaPredicted RBP21.6■■□□□ 1.05
USB1-213ENST00000566292 RANBP17Q9H2T7 1088 aaKnown RBP21.6■■□□□ 1.05
USB1-213ENST00000566292 NEDD4P46934 1319 aa21.59■■□□□ 1.05
USB1-213ENST00000566292 FRMPD2Q68DX3 1309 aaPredicted RBP21.59■■□□□ 1.05
USB1-213ENST00000566292 PCP11498 1178 aaKnown RBP21.59■■□□□ 1.05
USB1-213ENST00000566292 ACLYP53396 1101 aa21.59■■□□□ 1.05
USB1-213ENST00000566292 KCNA10Q16322 511 aa21.59■■□□□ 1.05
USB1-213ENST00000566292 SYDE2Q5VT97 1194 aa21.59■■□□□ 1.05
USB1-213ENST00000566292 CCPG1Q9ULG6 757 aa21.59■■□□□ 1.05
USB1-213ENST00000566292 SUPT16HQ9Y5B9 1047 aaKnown RBP21.59■■□□□ 1.05
USB1-213ENST00000566292 ICAM1P05362 532 aa21.58■■□□□ 1.05
USB1-213ENST00000566292 PDHBP11177 359 aa21.58■■□□□ 1.05
USB1-213ENST00000566292 CST5P28325 142 aaPredicted RBP21.58■■□□□ 1.05
USB1-213ENST00000566292 Q7L0L9 218 aa21.58■■□□□ 1.05
USB1-213ENST00000566292 BADQ92934 168 aa21.58■■□□□ 1.05
USB1-213ENST00000566292 UPF3AQ9H1J1 476 aaKnown RBP21.58■■□□□ 1.05
USB1-213ENST00000566292 GPCPD1Q9NPB8 672 aa21.58■■□□□ 1.05
USB1-213ENST00000566292 DIAPH3Q9NSV4 1193 aa21.58■■□□□ 1.05
USB1-213ENST00000566292 CYP39A1Q9NYL5 469 aa21.58■■□□□ 1.05
USB1-213ENST00000566292 DDX49Q9Y6V7 483 aaKnown RBP21.58■■□□□ 1.05
USB1-213ENST00000566292 MOXD2PA6NHM9 499 aa21.57■■□□□ 1.04
USB1-213ENST00000566292 ITGB8P26012 769 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms