RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 GNL2Q13823 731 aaKnown RBP19.28■□□□□ 0.68
RAB40C-210ENST00000566290 SRBD1Q8N5C6 995 aaKnown RBP19.28■□□□□ 0.68
RAB40C-210ENST00000566290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.28■□□□□ 0.68
RAB40C-210ENST00000566290 CNKSR2Q8WXI2 1034 aa19.28■□□□□ 0.68
RAB40C-210ENST00000566290 SLC10A4Q96EP9 437 aa19.28■□□□□ 0.68
RAB40C-210ENST00000566290 RBSNQ9H1K0 784 aa19.28■□□□□ 0.68
RAB40C-210ENST00000566290 ELP3Q9H9T3 547 aa19.28■□□□□ 0.68
RAB40C-210ENST00000566290 SYNPO2Q9UMS6 1093 aa19.28■□□□□ 0.68
RAB40C-210ENST00000566290 PCDHA7Q9UN72 937 aa19.28■□□□□ 0.68
RAB40C-210ENST00000566290 RANBP2P49792 3224 aaKnown RBP19.28■□□□□ 0.68
RAB40C-210ENST00000566290 CCDC192P0DO97 292 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 SNHG28P0DPA3 235 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 ME1P48163 572 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 PICALMQ13492 652 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 AXDND1Q5T1B0 1012 aaPredicted RBP19.27■□□□□ 0.68
RAB40C-210ENST00000566290 ELOA2Q8IYF1 753 aaPredicted RBP19.27■□□□□ 0.68
RAB40C-210ENST00000566290 ANKRD13AQ8IZ07 590 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 DAGLBQ8NCG7 672 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 SLC44A5Q8NCS7 719 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 ANP32BQ92688 251 aaKnown RBP19.27■□□□□ 0.68
RAB40C-210ENST00000566290 TNFRSF25Q93038 417 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 WNK4Q96J92 1243 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 TIGD1Q96MW7 591 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 GJB4Q9NTQ9 266 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 MAD2L2Q9UI95 211 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 CEP131Q9UPN4 1083 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 CLIC4Q9Y696 253 aa19.27■□□□□ 0.68
RAB40C-210ENST00000566290 DDTLA6NHG4 134 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-210ENST00000566290 PPFIA3O75145 1194 aa19.26■□□□□ 0.67
RAB40C-210ENST00000566290 KRT2P35908 639 aa19.26■□□□□ 0.67
RAB40C-210ENST00000566290 MAP3K9P80192 1104 aa19.26■□□□□ 0.67
RAB40C-210ENST00000566290 CRHR2Q13324 411 aa19.26■□□□□ 0.67
RAB40C-210ENST00000566290 SNW1Q13573 536 aaKnown RBP19.26■□□□□ 0.67
RAB40C-210ENST00000566290 VGLL4Q14135 290 aa19.26■□□□□ 0.67
RAB40C-210ENST00000566290 NPY5RQ15761 445 aa19.26■□□□□ 0.67
RAB40C-210ENST00000566290 CCAR1Q8IX12 1150 aaKnown RBP19.26■□□□□ 0.67
RAB40C-210ENST00000566290 FMR1NBQ8N0W7 255 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-210ENST00000566290 ZNF579Q8NAF0 562 aaKnown RBP19.26■□□□□ 0.67
RAB40C-210ENST00000566290 FTOQ9C0B1 505 aaKnown RBP eCLIP19.26■□□□□ 0.67
RAB40C-210ENST00000566290 TNMDQ9H2S6 317 aa19.26■□□□□ 0.67
RAB40C-210ENST00000566290 MTMR4Q9NYA4 1195 aa19.26■□□□□ 0.67
RAB40C-210ENST00000566290 BTBD18B2RXH4 712 aa19.25■□□□□ 0.67
RAB40C-210ENST00000566290 CUTAO60888 179 aa19.25■□□□□ 0.67
RAB40C-210ENST00000566290 NR1I2O75469 434 aa19.25■□□□□ 0.67
RAB40C-210ENST00000566290 SHMT1P34896 483 aa19.25■□□□□ 0.67
RAB40C-210ENST00000566290 SF3A1Q15459 793 aaKnown RBP19.25■□□□□ 0.67
RAB40C-210ENST00000566290 FOXP4Q8IVH2 680 aaPredicted RBP19.25■□□□□ 0.67
RAB40C-210ENST00000566290 CCDC148Q8NFR7 591 aa19.25■□□□□ 0.67
RAB40C-210ENST00000566290 ZKSCAN4Q969J2 545 aaPredicted RBP19.25■□□□□ 0.67
RAB40C-210ENST00000566290 PDLIM2Q96JY6 352 aa19.25■□□□□ 0.67
RAB40C-210ENST00000566290 V9GY48 417 aaPredicted RBP19.25■□□□□ 0.67
RAB40C-210ENST00000566290 KINO60870 393 aaKnown RBP19.24■□□□□ 0.67
RAB40C-210ENST00000566290 MYCP01106 439 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-210ENST00000566290 INPP5BP32019 993 aa19.24■□□□□ 0.67
RAB40C-210ENST00000566290 ASPRV1Q53RT3 343 aa19.24■□□□□ 0.67
RAB40C-210ENST00000566290 SHISA4Q96DD7 197 aa19.24■□□□□ 0.67
RAB40C-210ENST00000566290 CEP95Q96GE4 821 aa19.24■□□□□ 0.67
RAB40C-210ENST00000566290 WRNIP1Q96S55 665 aa19.24■□□□□ 0.67
RAB40C-210ENST00000566290 PI4KBQ9UBF8 816 aa19.24■□□□□ 0.67
RAB40C-210ENST00000566290 HPSEQ9Y251 543 aa19.24■□□□□ 0.67
RAB40C-210ENST00000566290 SNCAIPQ9Y6H5 919 aa19.24■□□□□ 0.67
RAB40C-210ENST00000566290 COL6A3P12111 3177 aa19.24■□□□□ 0.67
RAB40C-210ENST00000566290 ESYT2A0FGR8 921 aa19.23■□□□□ 0.67
RAB40C-210ENST00000566290 UNCXA6NJT0 531 aa19.23■□□□□ 0.67
RAB40C-210ENST00000566290 SP3Q02447 781 aa19.23■□□□□ 0.67
RAB40C-210ENST00000566290 SLC4A8Q2Y0W8 1093 aa19.23■□□□□ 0.67
RAB40C-210ENST00000566290 FSIP1Q8NA03 581 aa19.23■□□□□ 0.67
RAB40C-210ENST00000566290 CCDC12Q8WUD4 166 aaPredicted RBP19.23■□□□□ 0.67
RAB40C-210ENST00000566290 OPTNQ96CV9 577 aa19.23■□□□□ 0.67
RAB40C-210ENST00000566290 NOL7Q9UMY1 257 aaKnown RBP19.23■□□□□ 0.67
RAB40C-210ENST00000566290 STX8Q9UNK0 236 aa19.23■□□□□ 0.67
RAB40C-210ENST00000566290 TTLL1O95922 423 aa19.22■□□□□ 0.67
RAB40C-210ENST00000566290 PARP1P09874 1014 aaKnown RBP19.22■□□□□ 0.67
RAB40C-210ENST00000566290 TOB1P50616 345 aaPredicted RBP19.22■□□□□ 0.67
RAB40C-210ENST00000566290 TATDN1Q6P1N9 297 aa19.22■□□□□ 0.67
RAB40C-210ENST00000566290 ZNF341Q9BYN7 854 aa19.22■□□□□ 0.67
RAB40C-210ENST00000566290 PANK2Q9BZ23 570 aa19.22■□□□□ 0.67
RAB40C-210ENST00000566290 GOLPH3LQ9H4A5 285 aa19.22■□□□□ 0.67
RAB40C-210ENST00000566290 ZNF112Q9UJU3 913 aa19.22■□□□□ 0.67
RAB40C-210ENST00000566290 KCNJ14Q9UNX9 436 aa19.22■□□□□ 0.67
RAB40C-210ENST00000566290 PTCH2Q9Y6C5 1203 aa19.22■□□□□ 0.67
RAB40C-210ENST00000566290 ZBTB48P10074 688 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-210ENST00000566290 PTPREP23469 700 aa19.21■□□□□ 0.67
RAB40C-210ENST00000566290 CEBPZQ03701 1054 aaKnown RBP19.21■□□□□ 0.67
RAB40C-210ENST00000566290 HS1BP3Q53T59 392 aa19.21■□□□□ 0.67
RAB40C-210ENST00000566290 RESP18Q5W5W9 173 aa19.21■□□□□ 0.67
RAB40C-210ENST00000566290 DCAF15Q66K64 600 aa19.21■□□□□ 0.67
RAB40C-210ENST00000566290 ZSCAN29Q8IWY8 852 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-210ENST00000566290 CMTR1Q8N1G2 835 aaKnown RBP19.21■□□□□ 0.67
RAB40C-210ENST00000566290 KRI1Q8N9T8 703 aaKnown RBP19.21■□□□□ 0.67
RAB40C-210ENST00000566290 MKL1Q969V6 931 aa19.21■□□□□ 0.67
RAB40C-210ENST00000566290 PTPN18Q99952 460 aa19.21■□□□□ 0.67
RAB40C-210ENST00000566290 RIOX1Q9H6W3 641 aa19.21■□□□□ 0.67
RAB40C-210ENST00000566290 VPS54Q9P1Q0 977 aa19.21■□□□□ 0.67
RAB40C-210ENST00000566290 NYAP2Q9P242 653 aa19.21■□□□□ 0.67
RAB40C-210ENST00000566290 FAM196BA6NMK8 535 aa19.2■□□□□ 0.66
RAB40C-210ENST00000566290 PHF20L1A8MW92 1017 aa19.2■□□□□ 0.66
RAB40C-210ENST00000566290 ORC2Q13416 577 aaPredicted RBP19.2■□□□□ 0.66
RAB40C-210ENST00000566290 SLC9C1Q4G0N8 1177 aa19.2■□□□□ 0.66
RAB40C-210ENST00000566290 GPATCH4Q5T3I0 446 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms