RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 GJB5O95377 273 aa11.22□□□□□ -0.61
SMPD3-206ENST00000566009 MAP4K4O95819 1239 aaPredicted RBP11.22□□□□□ -0.61
SMPD3-206ENST00000566009 IQCF3P0C7M6 154 aa11.22□□□□□ -0.61
SMPD3-206ENST00000566009 WDR5P61964 334 aaKnown RBP11.22□□□□□ -0.61
SMPD3-206ENST00000566009 DEFB103AP81534 67 aa11.22□□□□□ -0.61
SMPD3-206ENST00000566009 FLIIQ13045 1269 aa11.22□□□□□ -0.61
SMPD3-206ENST00000566009 FKBP5Q13451 457 aaPredicted RBP11.22□□□□□ -0.61
SMPD3-206ENST00000566009 CCDC146Q8IYE0 955 aa11.22□□□□□ -0.61
SMPD3-206ENST00000566009 CRACR2BQ8N4Y2 399 aaPredicted RBP11.22□□□□□ -0.61
SMPD3-206ENST00000566009 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
SMPD3-206ENST00000566009 MB21D1Q8N884 522 aa11.22□□□□□ -0.61
SMPD3-206ENST00000566009 LPIN2Q92539 896 aa11.22□□□□□ -0.61
SMPD3-206ENST00000566009 CRBNQ96SW2 442 aa11.22□□□□□ -0.61
SMPD3-206ENST00000566009 TRIM34Q9BYJ4 488 aa11.22□□□□□ -0.61
SMPD3-206ENST00000566009 DHX36Q9H2U1 1008 aaKnown RBP11.22□□□□□ -0.61
SMPD3-206ENST00000566009 CD207Q9UJ71 328 aa11.22□□□□□ -0.61
SMPD3-206ENST00000566009 CEP250Q9BV73 2442 aa11.21□□□□□ -0.61
SMPD3-206ENST00000566009 SOBPA7XYQ1 873 aa11.21□□□□□ -0.61
SMPD3-206ENST00000566009 ADRB1P08588 477 aa11.21□□□□□ -0.61
SMPD3-206ENST00000566009 SUPT20HL2P0C7V6 817 aa11.21□□□□□ -0.61
SMPD3-206ENST00000566009 ACVR2BQ13705 512 aa11.21□□□□□ -0.61
SMPD3-206ENST00000566009 COL9A3Q14050 684 aaPredicted RBP11.21□□□□□ -0.61
SMPD3-206ENST00000566009 BEND3Q5T5X7 828 aa11.21□□□□□ -0.61
SMPD3-206ENST00000566009 KAZALD1Q96I82 304 aa11.21□□□□□ -0.61
SMPD3-206ENST00000566009 ALDH8A1Q9H2A2 487 aaPredicted RBP11.21□□□□□ -0.61
SMPD3-206ENST00000566009 TRMT13Q9NUP7 481 aaKnown RBP11.21□□□□□ -0.61
SMPD3-206ENST00000566009 IFT57Q9NWB7 429 aa11.21□□□□□ -0.61
SMPD3-206ENST00000566009 SIPA1L1O43166 1804 aa11.21□□□□□ -0.62
SMPD3-206ENST00000566009 SEMA3EO15041 775 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 SLC25A27O95847 323 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 ICAM3P32942 547 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 ATXN1P54253 815 aaKnown RBP11.2□□□□□ -0.62
SMPD3-206ENST00000566009 PSMC6P62333 389 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 GNAI1P63096 354 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 MECOMQ03112 1051 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 GPM6BQ13491 265 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 PTPN21Q16825 1174 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 CCDC144BQ3MJ40 725 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 MAMDC4Q6UXC1 1216 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 ZNF384Q8TF68 577 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 SUCLG2Q96I99 432 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 SEMA4AQ9H3S1 761 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 TET1Q8NFU7 2136 aa11.2□□□□□ -0.62
SMPD3-206ENST00000566009 CDK5RAP2Q96SN8 1893 aa11.19□□□□□ -0.62
SMPD3-206ENST00000566009 H3BNC9 293 aa11.19□□□□□ -0.62
SMPD3-206ENST00000566009 TBX10O75333 385 aa11.19□□□□□ -0.62
SMPD3-206ENST00000566009 HYAL1Q12794 435 aa11.19□□□□□ -0.62
SMPD3-206ENST00000566009 RAB3GAP1Q15042 981 aa11.19□□□□□ -0.62
SMPD3-206ENST00000566009 EPC2Q52LR7 807 aa11.19□□□□□ -0.62
SMPD3-206ENST00000566009 TEX11Q8IYF3 940 aa11.19□□□□□ -0.62
SMPD3-206ENST00000566009 RETREG2Q8NC44 543 aa11.19□□□□□ -0.62
SMPD3-206ENST00000566009 KLHDC4Q8TBB5 520 aa11.19□□□□□ -0.62
SMPD3-206ENST00000566009 HINFPQ9BQA5 517 aa11.19□□□□□ -0.62
SMPD3-206ENST00000566009 TANGO6Q9C0B7 1094 aa11.19□□□□□ -0.62
SMPD3-206ENST00000566009 C9orf78Q9NZ63 289 aaPredicted RBP11.19□□□□□ -0.62
SMPD3-206ENST00000566009 ASTN1O14525 1302 aa11.18□□□□□ -0.62
SMPD3-206ENST00000566009 ZIC2O95409 532 aaPredicted RBP11.18□□□□□ -0.62
SMPD3-206ENST00000566009 EYA4O95677 639 aa11.18□□□□□ -0.62
SMPD3-206ENST00000566009 PHKA1P46020 1223 aa11.18□□□□□ -0.62
SMPD3-206ENST00000566009 TMEM132BQ14DG7 1078 aa11.18□□□□□ -0.62
SMPD3-206ENST00000566009 SPTY2D1Q68D10 685 aaPredicted RBP11.18□□□□□ -0.62
SMPD3-206ENST00000566009 FAM117BQ6P1L5 589 aa11.18□□□□□ -0.62
SMPD3-206ENST00000566009 DCLK2Q8N568 766 aa11.18□□□□□ -0.62
SMPD3-206ENST00000566009 ATG4CQ96DT6 458 aa11.18□□□□□ -0.62
SMPD3-206ENST00000566009 RPGRIP1Q96KN7 1286 aa11.18□□□□□ -0.62
SMPD3-206ENST00000566009 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
SMPD3-206ENST00000566009 COL11A1P12107 1806 aaPredicted RBP11.18□□□□□ -0.62
SMPD3-206ENST00000566009 F6X3S4 739 aa11.17□□□□□ -0.62
SMPD3-206ENST00000566009 LDHCP07864 332 aa11.17□□□□□ -0.62
SMPD3-206ENST00000566009 SDHBP21912 280 aa11.17□□□□□ -0.62
SMPD3-206ENST00000566009 DMWDQ09019 674 aa11.17□□□□□ -0.62
SMPD3-206ENST00000566009 ASTLQ6HA08 431 aaPredicted RBP11.17□□□□□ -0.62
SMPD3-206ENST00000566009 ERICH6Q7L0X2 663 aa11.17□□□□□ -0.62
SMPD3-206ENST00000566009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMPD3-206ENST00000566009 MSLNLQ96KJ4 702 aa11.17□□□□□ -0.62
SMPD3-206ENST00000566009 SAMD11Q96NU1 681 aa11.17□□□□□ -0.62
SMPD3-206ENST00000566009 HAUS7Q99871 368 aa11.17□□□□□ -0.62
SMPD3-206ENST00000566009 ABHD16BQ9H3Z7 469 aa11.17□□□□□ -0.62
SMPD3-206ENST00000566009 PALD1Q9ULE6 856 aa11.17□□□□□ -0.62
SMPD3-206ENST00000566009 INSL6Q9Y581 213 aa11.17□□□□□ -0.62
SMPD3-206ENST00000566009 MYO7AQ13402 2215 aa11.17□□□□□ -0.62
SMPD3-206ENST00000566009 PITPNM1O00562 1244 aa11.16□□□□□ -0.62
SMPD3-206ENST00000566009 LINC01565O15544 149 aa11.16□□□□□ -0.62
SMPD3-206ENST00000566009 FSCN1Q16658 493 aaKnown RBP11.16□□□□□ -0.62
SMPD3-206ENST00000566009 RIOX2Q8IUF8 465 aa11.16□□□□□ -0.62
SMPD3-206ENST00000566009 CYP2W1Q8TAV3 490 aa11.16□□□□□ -0.62
SMPD3-206ENST00000566009 SH3RF3Q8TEJ3 882 aaPredicted RBP11.16□□□□□ -0.62
SMPD3-206ENST00000566009 RUBCNQ92622 972 aa11.16□□□□□ -0.62
SMPD3-206ENST00000566009 RUNDC1Q96C34 613 aa11.16□□□□□ -0.62
SMPD3-206ENST00000566009 PHF7Q9BWX1 381 aaPredicted RBP11.16□□□□□ -0.62
SMPD3-206ENST00000566009 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.15□□□□□ -0.62
SMPD3-206ENST00000566009 DCDC2BA2VCK2 349 aa11.15□□□□□ -0.62
SMPD3-206ENST00000566009 ZBTB22O15209 634 aa11.15□□□□□ -0.62
SMPD3-206ENST00000566009 ZEB2O60315 1214 aa11.15□□□□□ -0.62
SMPD3-206ENST00000566009 FLOT1O75955 427 aa11.15□□□□□ -0.62
SMPD3-206ENST00000566009 GTF2F1P35269 517 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMPD3-206ENST00000566009 RRP1P56182 461 aaKnown RBP11.15□□□□□ -0.62
SMPD3-206ENST00000566009 ADAM15Q13444 863 aa11.15□□□□□ -0.62
SMPD3-206ENST00000566009 GPNMBQ14956 572 aa11.15□□□□□ -0.62
SMPD3-206ENST00000566009 ANGPT1Q15389 498 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms