RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 IFIT1BQ5T764 474 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 OLFML2BQ68BL8 750 aa16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 CHST3Q7LGC8 479 aa16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 RASEFQ8IZ41 740 aa16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 U2AF1L4Q8WU68 220 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 KCNB2Q92953 911 aa16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 FBXO40Q9UH90 709 aa16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 ZNF536O15090 1300 aa16.19■□□□□ 0.18
HERPUD1-210ENST00000565966 MCM3APO60318 1980 aa16.18■□□□□ 0.18
HERPUD1-210ENST00000565966 ERICH2A1L162 156 aa16.18■□□□□ 0.18
HERPUD1-210ENST00000565966 IFIT3O14879 490 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-210ENST00000565966 TKFCQ3LXA3 575 aa16.18■□□□□ 0.18
HERPUD1-210ENST00000565966 SYDE2Q5VT97 1194 aa16.18■□□□□ 0.18
HERPUD1-210ENST00000565966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.18■□□□□ 0.18
HERPUD1-210ENST00000565966 DDX11Q96FC9 970 aa16.18■□□□□ 0.18
HERPUD1-210ENST00000565966 AGBL1Q96MI9 1066 aa16.18■□□□□ 0.18
HERPUD1-210ENST00000565966 DEFB118Q96PH6 123 aa16.18■□□□□ 0.18
HERPUD1-210ENST00000565966 RANBP17Q9H2T7 1088 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-210ENST00000565966 DIS3Q9Y2L1 958 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-210ENST00000565966 BAZ2BQ9UIF8 2168 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-210ENST00000565966 TNRC18O15417 2968 aaPredicted RBP16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 EPB41L2O43491 1005 aaKnown RBP16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 IGHA2P01877 340 aa16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 TFRCP02786 760 aaKnown RBP16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 PGK2P07205 417 aa16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 HSPA4P34932 840 aa16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 SNAP25P60880 206 aa16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 CCDC174Q6PII3 467 aa16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 IGDCC4Q8TDY8 1250 aa16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 SHISA4Q96DD7 197 aa16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 MAML3Q96JK9 1138 aa16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 SENP2Q9HC62 589 aa16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 FRMPD3Q5JV73 1810 aa16.17■□□□□ 0.18
HERPUD1-210ENST00000565966 PRC1O43663 620 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 ICAM1P05362 532 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 PARP1P09874 1014 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 GOLGA8HP0CJ92 632 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 CYP2C19P33261 490 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 MCM5P33992 734 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 WTAPQ15007 396 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 ZNF792Q3KQV3 632 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 ADCK5Q3MIX3 580 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 ASPRV1Q53RT3 343 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 ANKRD35Q8N283 1001 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 TRERF1Q96PN7 1200 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 MTA3Q9BTC8 594 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 USP26Q9BXU7 913 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 CRISPLD2Q9H0B8 497 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 ACAD9Q9H845 621 aa16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 MKI67P46013 3256 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-210ENST00000565966 DNAJC25-GNG10A0A024R161 153 aa16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 ALAS1P13196 640 aa16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 CCND3P30281 292 aaPredicted RBP16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 KRT32Q14532 448 aa16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 TMEM67Q5HYA8 995 aa16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 NEK1Q96PY6 1258 aa16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 UBA5Q9GZZ9 404 aa16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 GPHNQ9NQX3 736 aaPredicted RBP16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 HOMER2Q9NSB8 354 aa16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 RNF146Q9NTX7 359 aa16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 PNMA2Q9UL42 364 aa16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 CCPG1Q9ULG6 757 aa16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 SNX14Q9Y5W7 946 aa16.15■□□□□ 0.18
HERPUD1-210ENST00000565966 SH2B2O14492 632 aaPredicted RBP16.14■□□□□ 0.17
HERPUD1-210ENST00000565966 TMEM87BQ96K49 555 aa16.14■□□□□ 0.17
HERPUD1-210ENST00000565966 TINF2Q9BSI4 451 aa16.14■□□□□ 0.17
HERPUD1-210ENST00000565966 LY9Q9HBG7 655 aa16.14■□□□□ 0.17
HERPUD1-210ENST00000565966 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
HERPUD1-210ENST00000565966 CYBAP13498 195 aa16.13■□□□□ 0.17
HERPUD1-210ENST00000565966 CNGA1P29973 690 aa16.13■□□□□ 0.17
HERPUD1-210ENST00000565966 EXOSC10Q01780 885 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-210ENST00000565966 TMTC2Q8N394 836 aa16.13■□□□□ 0.17
HERPUD1-210ENST00000565966 MSL3Q8N5Y2 521 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-210ENST00000565966 LRRC2Q9BYS8 371 aa16.13■□□□□ 0.17
HERPUD1-210ENST00000565966 CPVLQ9H3G5 476 aa16.13■□□□□ 0.17
HERPUD1-210ENST00000565966 OGDHLQ9ULD0 1010 aa16.13■□□□□ 0.17
HERPUD1-210ENST00000565966 LCTP09848 1927 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 MSCO60682 206 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 MUM1L1Q5H9M0 696 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 LHX8Q68G74 356 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 MAMDC4Q6UXC1 1216 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 DHX32Q7L7V1 743 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 CATIPQ7Z7H3 387 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 ZNF467Q7Z7K2 595 aaPredicted RBP16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 ADGRF4Q8IZF3 695 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 STAG2Q8N3U4 1231 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 TRPV1Q8NER1 839 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 A1CFQ9NQ94 594 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 NRBP1Q9UHY1 535 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 MAD2L2Q9UI95 211 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 PFASO15067 1338 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 WDR19Q8NEZ3 1342 aa16.12■□□□□ 0.17
HERPUD1-210ENST00000565966 PALM3A6NDB9 673 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 KLRF2D3W0D1 207 aa16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 POTEB2H3BUK9 544 aa16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 FARP2O94887 1054 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 HMGB1P09429 215 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 LIFRP42702 1097 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms