RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 ANKRD35Q8N283 1001 aa18.5■□□□□ 0.55
CDH3-204ENST00000565453 DCAF4Q8WV16 495 aa18.5■□□□□ 0.55
CDH3-204ENST00000565453 TOMM22Q9NS69 142 aa18.5■□□□□ 0.55
CDH3-204ENST00000565453 PHF24Q9UPV7 400 aa18.5■□□□□ 0.55
CDH3-204ENST00000565453 CNPY2Q9Y2B0 182 aa18.5■□□□□ 0.55
CDH3-204ENST00000565453 RANBP2P49792 3224 aaKnown RBP18.5■□□□□ 0.55
CDH3-204ENST00000565453 PCP11498 1178 aaKnown RBP18.49■□□□□ 0.55
CDH3-204ENST00000565453 PDE4AP27815 886 aa18.49■□□□□ 0.55
CDH3-204ENST00000565453 ADCYAP1R1P41586 468 aa18.49■□□□□ 0.55
CDH3-204ENST00000565453 IKQ13123 557 aaPredicted RBP18.49■□□□□ 0.55
CDH3-204ENST00000565453 TKFCQ3LXA3 575 aa18.49■□□□□ 0.55
CDH3-204ENST00000565453 BTNL9Q6UXG8 535 aa18.49■□□□□ 0.55
CDH3-204ENST00000565453 FAM133AQ8N9E0 248 aa18.49■□□□□ 0.55
CDH3-204ENST00000565453 LENG1Q96BZ8 264 aaPredicted RBP18.49■□□□□ 0.55
CDH3-204ENST00000565453 ACAD9Q9H845 621 aa18.49■□□□□ 0.55
CDH3-204ENST00000565453 HOMER2Q9NSB8 354 aa18.49■□□□□ 0.55
CDH3-204ENST00000565453 RNF146Q9NTX7 359 aa18.49■□□□□ 0.55
CDH3-204ENST00000565453 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.49■□□□□ 0.55
CDH3-204ENST00000565453 LAMA4Q16363 1823 aa18.49■□□□□ 0.55
CDH3-204ENST00000565453 ADAMTS4O75173 837 aa18.48■□□□□ 0.55
CDH3-204ENST00000565453 PGK1P00558 417 aa18.48■□□□□ 0.55
CDH3-204ENST00000565453 MYCNP04198 464 aaPredicted RBP18.48■□□□□ 0.55
CDH3-204ENST00000565453 SNAP25P60880 206 aa18.48■□□□□ 0.55
CDH3-204ENST00000565453 C1orf53Q5VUE5 145 aa18.48■□□□□ 0.55
CDH3-204ENST00000565453 TTBK2Q6IQ55 1244 aa18.48■□□□□ 0.55
CDH3-204ENST00000565453 CWC27Q6UX04 472 aaKnown RBP18.48■□□□□ 0.55
CDH3-204ENST00000565453 MFSD6Q6ZSS7 791 aa18.48■□□□□ 0.55
CDH3-204ENST00000565453 RANBP17Q9H2T7 1088 aaKnown RBP18.48■□□□□ 0.55
CDH3-204ENST00000565453 A1CFQ9NQ94 594 aaKnown RBP18.48■□□□□ 0.55
CDH3-204ENST00000565453 DIAPH3Q9NSV4 1193 aa18.48■□□□□ 0.55
CDH3-204ENST00000565453 MTMR7Q9Y216 660 aa18.48■□□□□ 0.55
CDH3-204ENST00000565453 NEDD4P46934 1319 aa18.48■□□□□ 0.55
CDH3-204ENST00000565453 HIP1O00291 1037 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 CNTN2Q02246 1040 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 ACVR2BQ13705 512 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 CCDC96Q2M329 555 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 CCDC174Q6PII3 467 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 RNF180Q86T96 592 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 FERMT2Q96AC1 680 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 TTC14Q96N46 770 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 TRERF1Q96PN7 1200 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 KATNBL1Q9H079 304 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 RNF41Q9H4P4 317 aaPredicted RBP18.47■□□□□ 0.55
CDH3-204ENST00000565453 ZHX1Q9UKY1 873 aaPredicted RBP18.47■□□□□ 0.55
CDH3-204ENST00000565453 FAM184BQ9ULE4 1060 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 ATP11BQ9Y2G3 1177 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 SYNRGQ9UMZ2 1314 aa18.47■□□□□ 0.55
CDH3-204ENST00000565453 SOWAHBA6NEL2 793 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 POTEB2H3BUK9 544 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 ADCY6O43306 1168 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 PDHBP11177 359 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 ALAS1P13196 640 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 MDM2Q00987 491 aaPredicted RBP18.46■□□□□ 0.55
CDH3-204ENST00000565453 TRIM60Q495X7 471 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 MUM1L1Q5H9M0 696 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 ARMCX2Q7L311 632 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 TDHQ8IZJ6 230 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 KLHDC9Q8NEP7 349 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 LRCH3Q96II8 777 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 DSCC1Q9BVC3 393 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 UBE2OQ9C0C9 1292 aaKnown RBP18.46■□□□□ 0.55
CDH3-204ENST00000565453 IL25Q9H293 177 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 LTBP2Q14767 1821 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 ASTN1O14525 1302 aa18.46■□□□□ 0.55
CDH3-204ENST00000565453 MCM3APO60318 1980 aa18.45■□□□□ 0.54
CDH3-204ENST00000565453 ZNF213O14771 459 aa18.45■□□□□ 0.54
CDH3-204ENST00000565453 ICAM1P05362 532 aa18.45■□□□□ 0.54
CDH3-204ENST00000565453 SNHG28P0DPA3 235 aa18.45■□□□□ 0.54
CDH3-204ENST00000565453 GSPT1P15170 499 aaKnown RBP18.45■□□□□ 0.54
CDH3-204ENST00000565453 SLC16A2P36021 539 aa18.45■□□□□ 0.54
CDH3-204ENST00000565453 SYDE2Q5VT97 1194 aa18.45■□□□□ 0.54
CDH3-204ENST00000565453 CCSAPQ6IQ19 270 aaPredicted RBP18.45■□□□□ 0.54
CDH3-204ENST00000565453 CCDC144CPQ8IYA2 1237 aa18.45■□□□□ 0.54
CDH3-204ENST00000565453 ABHD16BQ9H3Z7 469 aa18.45■□□□□ 0.54
CDH3-204ENST00000565453 FRMPD2Q68DX3 1309 aaPredicted RBP18.45■□□□□ 0.54
CDH3-204ENST00000565453 LRRC37A2A6NM11 1700 aa18.44■□□□□ 0.54
CDH3-204ENST00000565453 A0A1W2PQ45 241 aaPredicted RBP18.44■□□□□ 0.54
CDH3-204ENST00000565453 A0A1W2PQY0 241 aa18.44■□□□□ 0.54
CDH3-204ENST00000565453 DUSP11O75319 330 aaKnown RBP18.44■□□□□ 0.54
CDH3-204ENST00000565453 NT5C2P49902 561 aa18.44■□□□□ 0.54
CDH3-204ENST00000565453 ZNF543Q08ER8 600 aa18.44■□□□□ 0.54
CDH3-204ENST00000565453 LRIT3Q3SXY7 679 aa18.44■□□□□ 0.54
CDH3-204ENST00000565453 ESR2Q92731 530 aa18.44■□□□□ 0.54
CDH3-204ENST00000565453 TSEN34Q9BSV6 310 aaKnown RBP18.44■□□□□ 0.54
CDH3-204ENST00000565453 GPCPD1Q9NPB8 672 aa18.44■□□□□ 0.54
CDH3-204ENST00000565453 CYP39A1Q9NYL5 469 aa18.44■□□□□ 0.54
CDH3-204ENST00000565453 CCPG1Q9ULG6 757 aa18.44■□□□□ 0.54
CDH3-204ENST00000565453 LCTP09848 1927 aa18.44■□□□□ 0.54
CDH3-204ENST00000565453 MYADML2A6NDP7 307 aa18.43■□□□□ 0.54
CDH3-204ENST00000565453 CST5P28325 142 aaPredicted RBP18.43■□□□□ 0.54
CDH3-204ENST00000565453 IRX5P78411 483 aaPredicted RBP18.43■□□□□ 0.54
CDH3-204ENST00000565453 IRX6P78412 446 aaPredicted RBP18.43■□□□□ 0.54
CDH3-204ENST00000565453 CCDC144BQ3MJ40 725 aa18.43■□□□□ 0.54
CDH3-204ENST00000565453 TTC22Q5TAA0 569 aa18.43■□□□□ 0.54
CDH3-204ENST00000565453 UPF3AQ9H1J1 476 aaKnown RBP18.43■□□□□ 0.54
CDH3-204ENST00000565453 PDLIM7Q9NR12 457 aa18.43■□□□□ 0.54
CDH3-204ENST00000565453 SH3RF1Q7Z6J0 888 aa18.42■□□□□ 0.54
CDH3-204ENST00000565453 DGKHQ86XP1 1220 aa18.42■□□□□ 0.54
CDH3-204ENST00000565453 ANKS1AQ92625 1134 aa18.42■□□□□ 0.54
CDH3-204ENST00000565453 ZKSCAN3Q9BRR0 538 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms