RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 ATG4CQ96DT6 458 aa30.23■■■□□ 2.43
NME3-208ENST00000565379 SENP2Q9HC62 589 aa30.23■■■□□ 2.43
NME3-208ENST00000565379 GPHNQ9NQX3 736 aaPredicted RBP30.23■■■□□ 2.43
NME3-208ENST00000565379 FEM1BQ9UK73 627 aa30.23■■■□□ 2.43
NME3-208ENST00000565379 TRIOBPQ9H2D6 2365 aa30.22■■■□□ 2.43
NME3-208ENST00000565379 TFRCP02786 760 aaKnown RBP30.22■■■□□ 2.43
NME3-208ENST00000565379 PRKAR2AP13861 404 aaKnown RBP30.22■■■□□ 2.43
NME3-208ENST00000565379 EVCP57679 992 aa30.22■■■□□ 2.43
NME3-208ENST00000565379 TROAPQ12815 778 aa30.22■■■□□ 2.43
NME3-208ENST00000565379 COG2Q14746 738 aa30.22■■■□□ 2.43
NME3-208ENST00000565379 FAM160B2Q86V87 743 aa30.22■■■□□ 2.43
NME3-208ENST00000565379 DIS3LQ8TF46 1054 aaKnown RBP30.22■■■□□ 2.43
NME3-208ENST00000565379 CHURC1Q8WUH1 139 aa30.22■■■□□ 2.43
NME3-208ENST00000565379 MOV10L1Q9BXT6 1211 aaKnown RBP30.22■■■□□ 2.43
NME3-208ENST00000565379 CRISPLD2Q9H0B8 497 aa30.22■■■□□ 2.43
NME3-208ENST00000565379 CWC22Q9HCG8 908 aaKnown RBP30.22■■■□□ 2.43
NME3-208ENST00000565379 FBXO28Q9NVF7 368 aa30.22■■■□□ 2.43
NME3-208ENST00000565379 HOXC10Q9NYD6 342 aa30.22■■■□□ 2.43
NME3-208ENST00000565379 FLRT1Q9NZU1 646 aa30.22■■■□□ 2.43
NME3-208ENST00000565379 PARP14Q460N5 1801 aa30.22■■■□□ 2.43
NME3-208ENST00000565379 PARP1P09874 1014 aaKnown RBP30.21■■■□□ 2.43
NME3-208ENST00000565379 ZNF543Q08ER8 600 aa30.21■■■□□ 2.43
NME3-208ENST00000565379 CCDC96Q2M329 555 aa30.21■■■□□ 2.43
NME3-208ENST00000565379 MAP3K21Q5TCX8 1036 aa30.21■■■□□ 2.43
NME3-208ENST00000565379 NR2E3Q9Y5X4 410 aa30.21■■■□□ 2.43
NME3-208ENST00000565379 FLOT1O75955 427 aa30.2■■■□□ 2.43
NME3-208ENST00000565379 XRCC5P13010 732 aaKnown RBP30.2■■■□□ 2.43
NME3-208ENST00000565379 PTPREP23469 700 aa30.2■■■□□ 2.43
NME3-208ENST00000565379 DSG3P32926 999 aa30.2■■■□□ 2.43
NME3-208ENST00000565379 KIF5BP33176 963 aa30.2■■■□□ 2.43
NME3-208ENST00000565379 RGS2P41220 211 aa30.2■■■□□ 2.43
NME3-208ENST00000565379 CCNA1P78396 465 aa30.2■■■□□ 2.43
NME3-208ENST00000565379 MAP2K5Q13163 448 aa30.2■■■□□ 2.43
NME3-208ENST00000565379 PPP2R5BQ15173 497 aa30.2■■■□□ 2.43
NME3-208ENST00000565379 CTCFLQ8NI51 663 aaPredicted RBP30.2■■■□□ 2.43
NME3-208ENST00000565379 APBA2Q99767 749 aa30.2■■■□□ 2.43
NME3-208ENST00000565379 MTMR7Q9Y216 660 aa30.2■■■□□ 2.43
NME3-208ENST00000565379 KLF18A0A0U1RQI7 1052 aa30.19■■■□□ 2.42
NME3-208ENST00000565379 STAT2P52630 851 aa30.19■■■□□ 2.42
NME3-208ENST00000565379 CACNB2Q08289 660 aaPredicted RBP30.19■■■□□ 2.42
NME3-208ENST00000565379 TOB2Q14106 344 aaPredicted RBP30.19■■■□□ 2.42
NME3-208ENST00000565379 GRM4Q14833 912 aa30.19■■■□□ 2.42
NME3-208ENST00000565379 APOA5Q6Q788 366 aa30.19■■■□□ 2.42
NME3-208ENST00000565379 CHRDL2Q6WN34 429 aa30.19■■■□□ 2.42
NME3-208ENST00000565379 NUP88Q99567 741 aaPredicted RBP30.19■■■□□ 2.42
NME3-208ENST00000565379 ISY1Q9ULR0 285 aaKnown RBP30.19■■■□□ 2.42
NME3-208ENST00000565379 RPTORQ8N122 1335 aa30.19■■■□□ 2.42
NME3-208ENST00000565379 ZBTB43O43298 467 aa30.18■■■□□ 2.42
NME3-208ENST00000565379 FDX1P10109 184 aa30.18■■■□□ 2.42
NME3-208ENST00000565379 GNAQP50148 359 aa30.18■■■□□ 2.42
NME3-208ENST00000565379 PRPF38AQ8NAV1 312 aaKnown RBP30.18■■■□□ 2.42
NME3-208ENST00000565379 NPLOC4Q8TAT6 608 aa30.18■■■□□ 2.42
NME3-208ENST00000565379 NUP133Q8WUM0 1156 aa30.18■■■□□ 2.42
NME3-208ENST00000565379 SPATC1LQ9H0A9 340 aa30.18■■■□□ 2.42
NME3-208ENST00000565379 HMX1Q9NP08 348 aaPredicted RBP30.18■■■□□ 2.42
NME3-208ENST00000565379 TMEM232C9JQI7 657 aa30.17■■■□□ 2.42
NME3-208ENST00000565379 ST18O60284 1047 aa30.17■■■□□ 2.42
NME3-208ENST00000565379 CCND3P30281 292 aaPredicted RBP30.17■■■□□ 2.42
NME3-208ENST00000565379 GRB14Q14449 540 aa30.17■■■□□ 2.42
NME3-208ENST00000565379 BTNL9Q6UXG8 535 aa30.17■■■□□ 2.42
NME3-208ENST00000565379 ZNF274Q96GC6 653 aaPredicted RBP30.17■■■□□ 2.42
NME3-208ENST00000565379 SLF1Q9BQI6 1058 aa30.17■■■□□ 2.42
NME3-208ENST00000565379 BRPF3Q9ULD4 1205 aa30.17■■■□□ 2.42
NME3-208ENST00000565379 PPP1R9AQ9ULJ8 1098 aa30.17■■■□□ 2.42
NME3-208ENST00000565379 SLC15A5A6NIM6 579 aa30.16■■■□□ 2.42
NME3-208ENST00000565379 APOBRQ0VD83 1088 aa30.16■■■□□ 2.42
NME3-208ENST00000565379 PLS1Q14651 629 aa30.16■■■□□ 2.42
NME3-208ENST00000565379 KCTD1Q719H9 257 aa30.16■■■□□ 2.42
NME3-208ENST00000565379 MB21D1Q8N884 522 aa30.16■■■□□ 2.42
NME3-208ENST00000565379 LZTS2Q9BRK4 669 aa30.16■■■□□ 2.42
NME3-208ENST00000565379 RBM28Q9NW13 759 aaKnown RBP30.16■■■□□ 2.42
NME3-208ENST00000565379 PALM3A6NDB9 673 aaPredicted RBP30.15■■■□□ 2.42
NME3-208ENST00000565379 ERCC3P19447 782 aa30.15■■■□□ 2.42
NME3-208ENST00000565379 MNX1P50219 401 aaPredicted RBP30.15■■■□□ 2.42
NME3-208ENST00000565379 AK2P54819 239 aa30.15■■■□□ 2.42
NME3-208ENST00000565379 IKQ13123 557 aaPredicted RBP30.15■■■□□ 2.42
NME3-208ENST00000565379 FANCBQ8NB91 859 aa30.15■■■□□ 2.42
NME3-208ENST00000565379 PAWRQ96IZ0 340 aaKnown RBP30.15■■■□□ 2.42
NME3-208ENST00000565379 MAD2L2Q9UI95 211 aa30.15■■■□□ 2.42
NME3-208ENST00000565379 FRMPD2Q68DX3 1309 aaPredicted RBP30.15■■■□□ 2.42
NME3-208ENST00000565379 COL11A1P12107 1806 aaPredicted RBP30.15■■■□□ 2.42
NME3-208ENST00000565379 CCDC196A0A1B0GTZ2 297 aa30.14■■■□□ 2.42
NME3-208ENST00000565379 SMARCA1P28370 1054 aa30.14■■■□□ 2.42
NME3-208ENST00000565379 TMEM132BQ14DG7 1078 aa30.14■■■□□ 2.42
NME3-208ENST00000565379 MICU3Q86XE3 530 aa30.14■■■□□ 2.42
NME3-208ENST00000565379 GPCPD1Q9NPB8 672 aa30.14■■■□□ 2.42
NME3-208ENST00000565379 RBM27Q9P2N5 1060 aaKnown RBP30.14■■■□□ 2.42
NME3-208ENST00000565379 GOLGA8BA8MQT2 603 aa30.13■■■□□ 2.41
NME3-208ENST00000565379 MYL10Q9BUA6 226 aa30.13■■■□□ 2.41
NME3-208ENST00000565379 NAP1L2Q9ULW6 460 aaPredicted RBP30.13■■■□□ 2.41
NME3-208ENST00000565379 ADAMTS5Q9UNA0 930 aa30.13■■■□□ 2.41
NME3-208ENST00000565379 IVNS1ABPQ9Y6Y0 642 aa30.13■■■□□ 2.41
NME3-208ENST00000565379 RANBP2P49792 3224 aaKnown RBP30.13■■■□□ 2.41
NME3-208ENST00000565379 NID2Q14112 1375 aa30.13■■■□□ 2.41
NME3-208ENST00000565379 ALPK3Q96L96 1907 aa30.12■■■□□ 2.41
NME3-208ENST00000565379 KLRF2D3W0D1 207 aa30.12■■■□□ 2.41
NME3-208ENST00000565379 MCM2P49736 904 aa30.12■■■□□ 2.41
NME3-208ENST00000565379 METAP2P50579 478 aaKnown RBP eCLIP30.12■■■□□ 2.41
NME3-208ENST00000565379 GOLGA8AA7E2F4 631 aa30.11■■■□□ 2.41
NME3-208ENST00000565379 COBLO75128 1261 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms